RNA–Protein interactions for RNA: ENST00000463372.5

C9orf3-211, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 919 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-211ENST00000463372 DPF2Q92785 391 aa18.32■□□□□ 0.52
C9orf3-211ENST00000463372 PRAMEF22A3QJZ6 481 aa18.31■□□□□ 0.52
C9orf3-211ENST00000463372 CDCA8Q53HL2 280 aa18.31■□□□□ 0.52
C9orf3-211ENST00000463372 SLC51AQ86UW1 340 aa18.31■□□□□ 0.52
C9orf3-211ENST00000463372 CRAMP1Q96RY5 1269 aa18.31■□□□□ 0.52
C9orf3-211ENST00000463372 R3HDMLQ9H3Y0 253 aa18.31■□□□□ 0.52
C9orf3-211ENST00000463372 LAMA3Q16787 3333 aa18.31■□□□□ 0.52
C9orf3-211ENST00000463372 DPF3Q92784 378 aa18.3■□□□□ 0.52
C9orf3-211ENST00000463372 NYXQ9GZU5 481 aa18.3■□□□□ 0.52
C9orf3-211ENST00000463372 ZBTB12Q9Y330 459 aaPredicted RBP18.3■□□□□ 0.52
C9orf3-211ENST00000463372 EGFRP00533 1210 aa18.29■□□□□ 0.52
C9orf3-211ENST00000463372 KIAA2012Q0VF49 1180 aa18.29■□□□□ 0.52
C9orf3-211ENST00000463372 SLC4A8Q2Y0W8 1093 aa18.29■□□□□ 0.52
C9orf3-211ENST00000463372 ZNF790Q6PG37 636 aa18.29■□□□□ 0.52
C9orf3-211ENST00000463372 ANKRD13DQ6ZTN6 518 aa18.29■□□□□ 0.52
C9orf3-211ENST00000463372 RTFDC1Q9BY42 306 aaPredicted RBP18.29■□□□□ 0.52
C9orf3-211ENST00000463372 RIC1Q4ADV7 1423 aa18.29■□□□□ 0.52
C9orf3-211ENST00000463372 ABCC12Q96J65 1359 aa18.29■□□□□ 0.52
C9orf3-211ENST00000463372 RGL2O15211 777 aa18.28■□□□□ 0.52
C9orf3-211ENST00000463372 ALDH1A1P00352 501 aa18.28■□□□□ 0.52
C9orf3-211ENST00000463372 PIP4K2AP48426 406 aaPredicted RBP18.28■□□□□ 0.52
C9orf3-211ENST00000463372 DPP8Q6V1X1 898 aaPredicted RBP18.28■□□□□ 0.52
C9orf3-211ENST00000463372 NUTM1Q86Y26 1132 aa18.28■□□□□ 0.52
C9orf3-211ENST00000463372 FMNL2Q96PY5 1086 aa18.28■□□□□ 0.52
C9orf3-211ENST00000463372 PRDM6Q9NQX0 595 aa18.28■□□□□ 0.52
C9orf3-211ENST00000463372 GGA3Q9NZ52 723 aa18.28■□□□□ 0.52
C9orf3-211ENST00000463372 ATP6V0A2Q9Y487 856 aa18.28■□□□□ 0.52
C9orf3-211ENST00000463372 MKRN3Q13064 507 aaKnown RBP18.27■□□□□ 0.52
C9orf3-211ENST00000463372 ERO1AQ96HE7 468 aa18.27■□□□□ 0.52
C9orf3-211ENST00000463372 NBPF11Q86T75 865 aa18.26■□□□□ 0.51
C9orf3-211ENST00000463372 LRCH3Q96II8 777 aa18.26■□□□□ 0.51
C9orf3-211ENST00000463372 A0A1W2PPC1 479 aa18.25■□□□□ 0.51
C9orf3-211ENST00000463372 YDJCA8MPS7 323 aa18.25■□□□□ 0.51
C9orf3-211ENST00000463372 SOX1O00570 391 aaPredicted RBP18.25■□□□□ 0.51
C9orf3-211ENST00000463372 KIF4BQ2VIQ3 1234 aa18.25■□□□□ 0.51
C9orf3-211ENST00000463372 ZNF333Q96JL9 665 aa18.25■□□□□ 0.51
C9orf3-211ENST00000463372 PRO3102Q9H379 93 aa18.25■□□□□ 0.51
C9orf3-211ENST00000463372 STXBP5LQ9Y2K9 1186 aa18.25■□□□□ 0.51
C9orf3-211ENST00000463372 UBE2Q2LH0YL09 131 aa18.24■□□□□ 0.51
C9orf3-211ENST00000463372 PSMD14O00487 310 aa18.24■□□□□ 0.51
C9orf3-211ENST00000463372 RPS12P25398 132 aaKnown RBP18.24■□□□□ 0.51
C9orf3-211ENST00000463372 TEFQ10587 303 aa18.24■□□□□ 0.51
C9orf3-211ENST00000463372 MOB2Q70IA6 237 aa18.24■□□□□ 0.51
C9orf3-211ENST00000463372 MPNDQ8N594 471 aa18.24■□□□□ 0.51
C9orf3-211ENST00000463372 VCANP13611 3396 aa18.24■□□□□ 0.51
C9orf3-211ENST00000463372 NUP98P52948 1817 aa18.23■□□□□ 0.51
C9orf3-211ENST00000463372 TTLL12Q14166 644 aaPredicted RBP18.23■□□□□ 0.51
C9orf3-211ENST00000463372 EFCC1Q9HA90 598 aa18.23■□□□□ 0.51
C9orf3-211ENST00000463372 SIPA1L3O60292 1781 aaPredicted RBP18.22■□□□□ 0.51
C9orf3-211ENST00000463372 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.22■□□□□ 0.51
C9orf3-211ENST00000463372 TCIRG1Q13488 830 aa18.21■□□□□ 0.51
C9orf3-211ENST00000463372 HLFQ16534 295 aa18.21■□□□□ 0.51
C9orf3-211ENST00000463372 SLC9C1Q4G0N8 1177 aa18.21■□□□□ 0.51
C9orf3-211ENST00000463372 DEFB123Q8N688 67 aa18.21■□□□□ 0.51
C9orf3-211ENST00000463372 CD99L2Q8TCZ2 262 aa18.21■□□□□ 0.51
C9orf3-211ENST00000463372 KDM3BQ7LBC6 1761 aa18.21■□□□□ 0.51
C9orf3-211ENST00000463372 ZNF609O15014 1411 aa18.21■□□□□ 0.51
C9orf3-211ENST00000463372 MTHFSDQ2M296 383 aaKnown RBP18.2■□□□□ 0.5
C9orf3-211ENST00000463372 ANGEL2Q5VTE6 544 aaKnown RBP18.2■□□□□ 0.5
C9orf3-211ENST00000463372 USP16Q9Y5T5 823 aa18.2■□□□□ 0.5
C9orf3-211ENST00000463372 ASTN2O75129 1339 aaPredicted RBP18.2■□□□□ 0.5
C9orf3-211ENST00000463372 NR2E3Q9Y5X4 410 aa18.19■□□□□ 0.5
C9orf3-211ENST00000463372 MYCP01106 439 aaPredicted RBP18.18■□□□□ 0.5
C9orf3-211ENST00000463372 COL9A1P20849 921 aa18.18■□□□□ 0.5
C9orf3-211ENST00000463372 GPR153Q6NV75 609 aa18.18■□□□□ 0.5
C9orf3-211ENST00000463372 WTIPA6NIX2 430 aaPredicted RBP18.17■□□□□ 0.5
C9orf3-211ENST00000463372 SP8Q8IXZ3 490 aa18.17■□□□□ 0.5
C9orf3-211ENST00000463372 HTATIP2Q9BUP3 242 aa18.17■□□□□ 0.5
C9orf3-211ENST00000463372 TAF1P21675 1872 aa18.16■□□□□ 0.5
C9orf3-211ENST00000463372 DDX60Q8IY21 1712 aaKnown RBP18.16■□□□□ 0.5
C9orf3-211ENST00000463372 IL13P35225 146 aa18.16■□□□□ 0.5
C9orf3-211ENST00000463372 INHBEP58166 350 aa18.16■□□□□ 0.5
C9orf3-211ENST00000463372 SCARF1Q14162 830 aa18.16■□□□□ 0.5
C9orf3-211ENST00000463372 IFNL1Q8IU54 200 aa18.16■□□□□ 0.5
C9orf3-211ENST00000463372 LAMB4A4D0S4 1761 aa18.16■□□□□ 0.5
C9orf3-211ENST00000463372 BBOX1O75936 387 aa18.15■□□□□ 0.5
C9orf3-211ENST00000463372 NLRP3Q96P20 1036 aa18.15■□□□□ 0.5
C9orf3-211ENST00000463372 DBNDD1Q9H9R9 158 aa18.15■□□□□ 0.5
C9orf3-211ENST00000463372 ABCC4O15439 1325 aa18.15■□□□□ 0.5
C9orf3-211ENST00000463372 IBTKQ9P2D0 1353 aaPredicted RBP18.15■□□□□ 0.5
C9orf3-211ENST00000463372 HMOX1P09601 288 aa18.14■□□□□ 0.49
C9orf3-211ENST00000463372 NF2P35240 595 aa18.14■□□□□ 0.49
C9orf3-211ENST00000463372 MANSC4A6NHS7 340 aaPredicted RBP18.13■□□□□ 0.49
C9orf3-211ENST00000463372 SP3Q02447 781 aa18.13■□□□□ 0.49
C9orf3-211ENST00000463372 ARHGEF6Q15052 776 aa18.13■□□□□ 0.49
C9orf3-211ENST00000463372 WASHC4Q2M389 1173 aa18.13■□□□□ 0.49
C9orf3-211ENST00000463372 C3orf67Q6ZVT6 689 aa18.13■□□□□ 0.49
C9orf3-211ENST00000463372 Q7L0L9 218 aa18.13■□□□□ 0.49
C9orf3-211ENST00000463372 ERBB4Q15303 1308 aa18.13■□□□□ 0.49
C9orf3-211ENST00000463372 SPRYD7Q5W111 196 aa18.12■□□□□ 0.49
C9orf3-211ENST00000463372 PTCH2Q9Y6C5 1203 aa18.12■□□□□ 0.49
C9orf3-211ENST00000463372 BTBD11A6QL63 1104 aa18.11■□□□□ 0.49
C9orf3-211ENST00000463372 NBPF26B4DH59 902 aa18.11■□□□□ 0.49
C9orf3-211ENST00000463372 ZBTB7BO15156 539 aaPredicted RBP18.11■□□□□ 0.49
C9orf3-211ENST00000463372 KCNQ3O43525 872 aa18.11■□□□□ 0.49
C9orf3-211ENST00000463372 SNRPA1P09661 255 aaKnown RBP18.11■□□□□ 0.49
C9orf3-211ENST00000463372 GPTP24298 496 aa18.11■□□□□ 0.49
C9orf3-211ENST00000463372 NBPF10Q6P3W6 841 aaKnown RBP18.11■□□□□ 0.49
C9orf3-211ENST00000463372 PTPN12Q05209 780 aaKnown RBP18.1■□□□□ 0.49
C9orf3-211ENST00000463372 PRAMEF18Q5VWM3 479 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms