RNA–Protein interactions for RNA: ENST00000461981.5

CLK1-207, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 3,173 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-207ENST00000461981 FKBP4Q02790 459 aaKnown RBP eCLIP7.21□□□□□ -1.26
CLK1-207ENST00000461981 CCDC93Q567U6 631 aa7.21□□□□□ -1.26
CLK1-207ENST00000461981 NYXQ9GZU5 481 aa7.21□□□□□ -1.26
CLK1-207ENST00000461981 CAPN2P17655 700 aa7.2□□□□□ -1.26
CLK1-207ENST00000461981 PTMSP20962 102 aa7.2□□□□□ -1.26
CLK1-207ENST00000461981 NASPP49321 788 aaPredicted RBP7.2□□□□□ -1.26
CLK1-207ENST00000461981 ZNF710Q8N1W2 664 aa7.2□□□□□ -1.26
CLK1-207ENST00000461981 SUPT20HQ8NEM7 779 aa7.2□□□□□ -1.26
CLK1-207ENST00000461981 FMNL2Q96PY5 1086 aa7.2□□□□□ -1.26
CLK1-207ENST00000461981 RCAN3Q9UKA8 241 aa7.2□□□□□ -1.26
CLK1-207ENST00000461981 HOXA10P31260 410 aaPredicted RBP7.2□□□□□ -1.26
CLK1-207ENST00000461981 NFIXQ14938 502 aa7.2□□□□□ -1.26
CLK1-207ENST00000461981 AXDND1Q5T1B0 1012 aaPredicted RBP7.2□□□□□ -1.26
CLK1-207ENST00000461981 AMIGO3Q86WK7 504 aa7.2□□□□□ -1.26
CLK1-207ENST00000461981 C2CD5Q86YS7 1000 aa7.2□□□□□ -1.26
CLK1-207ENST00000461981 KNSTRNQ9Y448 316 aa7.2□□□□□ -1.26
CLK1-207ENST00000461981 ALDH1B1P30837 517 aa7.2□□□□□ -1.26
CLK1-207ENST00000461981 BCL2L12Q9HB09 334 aa7.2□□□□□ -1.26
CLK1-207ENST00000461981 ECE1P42892 770 aa7.19□□□□□ -1.26
CLK1-207ENST00000461981 MPNDQ8N594 471 aa7.19□□□□□ -1.26
CLK1-207ENST00000461981 C7orf43Q8WVR3 580 aa7.19□□□□□ -1.26
CLK1-207ENST00000461981 TIGD1Q96MW7 591 aa7.19□□□□□ -1.26
CLK1-207ENST00000461981 CRBNQ96SW2 442 aa7.19□□□□□ -1.26
CLK1-207ENST00000461981 PGAP2Q9UHJ9 254 aa7.19□□□□□ -1.26
CLK1-207ENST00000461981 DIAPH1O60610 1272 aaKnown RBP7.19□□□□□ -1.26
CLK1-207ENST00000461981 TNNT3P45378 269 aaPredicted RBP7.19□□□□□ -1.26
CLK1-207ENST00000461981 NOM1Q5C9Z4 860 aaKnown RBP7.19□□□□□ -1.26
CLK1-207ENST00000461981 CRAMP1Q96RY5 1269 aa7.19□□□□□ -1.26
CLK1-207ENST00000461981 TMX1Q9H3N1 280 aa7.19□□□□□ -1.26
CLK1-207ENST00000461981 GEMIN8Q9NWZ8 242 aaKnown RBP7.19□□□□□ -1.26
CLK1-207ENST00000461981 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.19□□□□□ -1.26
CLK1-207ENST00000461981 LTBP1Q14766 1721 aa7.19□□□□□ -1.26
CLK1-207ENST00000461981 A0A0G2JLW4 131 aa7.18□□□□□ -1.26
CLK1-207ENST00000461981 NFKBIEO00221 500 aa7.18□□□□□ -1.26
CLK1-207ENST00000461981 PHF14O94880 888 aa7.18□□□□□ -1.26
CLK1-207ENST00000461981 U2AF2P26368 475 aaKnown RBP eCLIP7.18□□□□□ -1.262e-7■■□□□ 14.5
CLK1-207ENST00000461981 MAP2K1Q02750 393 aaPredicted RBP7.18□□□□□ -1.26
CLK1-207ENST00000461981 BANK1Q8NDB2 785 aa7.18□□□□□ -1.26
CLK1-207ENST00000461981 RBM42Q9BTD8 480 aaKnown RBP7.18□□□□□ -1.26
CLK1-207ENST00000461981 NMRK2Q9NPI5 230 aa7.18□□□□□ -1.26
CLK1-207ENST00000461981 SAGE1Q9NXZ1 904 aa7.18□□□□□ -1.26
CLK1-207ENST00000461981 NUP98P52948 1817 aa7.18□□□□□ -1.26
CLK1-207ENST00000461981 ERICH4A6NGS2 130 aa7.18□□□□□ -1.26
CLK1-207ENST00000461981 GNAT3A8MTJ3 354 aa7.18□□□□□ -1.26
CLK1-207ENST00000461981 CAMTA2O94983 1202 aa7.18□□□□□ -1.26
CLK1-207ENST00000461981 C20orf194Q5TEA3 1177 aa7.18□□□□□ -1.26
CLK1-207ENST00000461981 ZC3H15Q8WU90 426 aaKnown RBP7.18□□□□□ -1.26
CLK1-207ENST00000461981 CFAP53Q96M91 514 aa7.18□□□□□ -1.26
CLK1-207ENST00000461981 TAOK3Q9H2K8 898 aa7.18□□□□□ -1.26
CLK1-207ENST00000461981 ISY1Q9ULR0 285 aaKnown RBP7.18□□□□□ -1.26
CLK1-207ENST00000461981 RBBP6Q7Z6E9 1792 aaKnown RBP7.18□□□□□ -1.26
CLK1-207ENST00000461981 SLX4Q8IY92 1834 aa7.18□□□□□ -1.26
CLK1-207ENST00000461981 MAP2K2P36507 400 aa7.18□□□□□ -1.26
CLK1-207ENST00000461981 CRY2Q49AN0 593 aa7.18□□□□□ -1.26
CLK1-207ENST00000461981 USP50Q70EL3 339 aaPredicted RBP7.18□□□□□ -1.26
CLK1-207ENST00000461981 TNS4Q8IZW8 715 aa7.18□□□□□ -1.26
CLK1-207ENST00000461981 TTC5Q8N0Z6 440 aa7.18□□□□□ -1.26
CLK1-207ENST00000461981 AIDAQ96BJ3 306 aa7.18□□□□□ -1.26
CLK1-207ENST00000461981 FZD9O00144 591 aa7.17□□□□□ -1.26
CLK1-207ENST00000461981 SEC24BO95487 1268 aa7.17□□□□□ -1.26
CLK1-207ENST00000461981 CSPP1Q1MSJ5 1256 aa7.17□□□□□ -1.26
CLK1-207ENST00000461981 PPP1R9BQ96SB3 815 aa7.17□□□□□ -1.26
CLK1-207ENST00000461981 RTFDC1Q9BY42 306 aaPredicted RBP7.17□□□□□ -1.26
CLK1-207ENST00000461981 CCDC66A2RUB6 948 aa7.17□□□□□ -1.26
CLK1-207ENST00000461981 ZNF500O60304 480 aaPredicted RBP7.17□□□□□ -1.26
CLK1-207ENST00000461981 COL1A1P02452 1464 aaPredicted RBP7.17□□□□□ -1.26
CLK1-207ENST00000461981 SRGNP10124 158 aa7.17□□□□□ -1.26
CLK1-207ENST00000461981 LMOD3Q0VAK6 560 aa7.17□□□□□ -1.26
CLK1-207ENST00000461981 SLC10A5Q5PT55 438 aa7.17□□□□□ -1.26
CLK1-207ENST00000461981 USPL1Q5W0Q7 1092 aa7.17□□□□□ -1.26
CLK1-207ENST00000461981 DNAJC10Q8IXB1 793 aa7.17□□□□□ -1.26
CLK1-207ENST00000461981 RRAGCQ9HB90 399 aa7.17□□□□□ -1.26
CLK1-207ENST00000461981 TMEM88BA6NKF7 163 aa7.16□□□□□ -1.26
CLK1-207ENST00000461981 POTECB2RU33 542 aa7.16□□□□□ -1.26
CLK1-207ENST00000461981 PER1O15534 1290 aaPredicted RBP7.16□□□□□ -1.26
CLK1-207ENST00000461981 HSPA1AP0DMV8 641 aaKnown RBP7.16□□□□□ -1.26
CLK1-207ENST00000461981 HSPA1BP0DMV9 641 aaKnown RBP7.16□□□□□ -1.26
CLK1-207ENST00000461981 HSPA5P11021 654 aaKnown RBP7.16□□□□□ -1.26
CLK1-207ENST00000461981 PARP10Q53GL7 1025 aa7.16□□□□□ -1.26
CLK1-207ENST00000461981 GPC2Q8N158 579 aa7.16□□□□□ -1.26
CLK1-207ENST00000461981 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.16□□□□□ -1.26
CLK1-207ENST00000461981 SULT6B1Q6IMI4 303 aa7.16□□□□□ -1.26
CLK1-207ENST00000461981 PRR5LQ6MZQ0 368 aa7.16□□□□□ -1.26
CLK1-207ENST00000461981 PDCL2Q8N4E4 241 aa7.16□□□□□ -1.26
CLK1-207ENST00000461981 NOL7Q9UMY1 257 aaKnown RBP7.16□□□□□ -1.26
CLK1-207ENST00000461981 UNCXA6NJT0 531 aa7.16□□□□□ -1.26
CLK1-207ENST00000461981 SNRPA1P09661 255 aaKnown RBP7.16□□□□□ -1.26
CLK1-207ENST00000461981 ZNF790Q6PG37 636 aa7.16□□□□□ -1.26
CLK1-207ENST00000461981 NFATC2IPQ8NCF5 419 aa7.16□□□□□ -1.26
CLK1-207ENST00000461981 ZNF526Q8TF50 670 aaPredicted RBP7.16□□□□□ -1.26
CLK1-207ENST00000461981 TBC1D2Q9BYX2 928 aa7.16□□□□□ -1.26
CLK1-207ENST00000461981 YY1AP1Q9H869 796 aa7.16□□□□□ -1.26
CLK1-207ENST00000461981 WBP1LQ9NX94 342 aa7.16□□□□□ -1.26
CLK1-207ENST00000461981 HACL1Q9UJ83 578 aa7.16□□□□□ -1.26
CLK1-207ENST00000461981 TICAM2Q86XR7 235 aa7.15□□□□□ -1.26
CLK1-207ENST00000461981 EGFL6Q8IUX8 553 aa7.15□□□□□ -1.26
CLK1-207ENST00000461981 MYRIPQ8NFW9 859 aa7.15□□□□□ -1.26
CLK1-207ENST00000461981 TAF1DQ9H5J8 278 aaPredicted RBP7.15□□□□□ -1.26
CLK1-207ENST00000461981 KIF3AQ9Y496 699 aa7.15□□□□□ -1.26
CLK1-207ENST00000461981 CACNA1SQ13698 1873 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms