RNA–Protein interactions for RNA: ENST00000461923.5

KRT40-203, Transcript of keratin 40, humanhuman

TSL 2

Gene KRT40, Length 2,102 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT40-203ENST00000461923 TSGA10IPQ3SY00 556 aa14.82□□□□□ -0.04
KRT40-203ENST00000461923 EDC3Q96F86 508 aaKnown RBP14.82□□□□□ -0.04
KRT40-203ENST00000461923 HMG20BQ9P0W2 317 aa14.82□□□□□ -0.04
KRT40-203ENST00000461923 DTNBO60941 627 aa14.81□□□□□ -0.04
KRT40-203ENST00000461923 TAF5LO75529 589 aa14.81□□□□□ -0.04
KRT40-203ENST00000461923 RPS6KB1P23443 525 aa14.81□□□□□ -0.04
KRT40-203ENST00000461923 CASP7P55210 303 aa14.81□□□□□ -0.04
KRT40-203ENST00000461923 DNM1Q05193 864 aaKnown RBP14.81□□□□□ -0.04
KRT40-203ENST00000461923 TFCP2Q12800 502 aa14.81□□□□□ -0.04
KRT40-203ENST00000461923 CSPP1Q1MSJ5 1256 aa14.81□□□□□ -0.04
KRT40-203ENST00000461923 BLOC1S2Q6QNY1 142 aa14.81□□□□□ -0.04
KRT40-203ENST00000461923 FAM184AQ8NB25 1140 aa14.81□□□□□ -0.04
KRT40-203ENST00000461923 ZKSCAN5Q9Y2L8 839 aa14.81□□□□□ -0.04
KRT40-203ENST00000461923 TAF6LQ9Y6J9 622 aa14.81□□□□□ -0.04
KRT40-203ENST00000461923 OFD1O75665 1012 aa14.81□□□□□ -0.04
KRT40-203ENST00000461923 LETM1O95202 739 aaPredicted RBP14.81□□□□□ -0.04
KRT40-203ENST00000461923 CABP4P57796 275 aa14.81□□□□□ -0.04
KRT40-203ENST00000461923 ANKRD1Q15327 319 aa14.81□□□□□ -0.04
KRT40-203ENST00000461923 USPL1Q5W0Q7 1092 aa14.81□□□□□ -0.04
KRT40-203ENST00000461923 PLBD2Q8NHP8 589 aa14.81□□□□□ -0.04
KRT40-203ENST00000461923 CCDC39Q9UFE4 941 aa14.81□□□□□ -0.04
KRT40-203ENST00000461923 A0A087WZG4 1122 aa14.8□□□□□ -0.04
KRT40-203ENST00000461923 VPS37CA5D8V6 355 aaPredicted RBP14.8□□□□□ -0.04
KRT40-203ENST00000461923 ATP5J2-PTCD1G3V325 749 aa14.8□□□□□ -0.04
KRT40-203ENST00000461923 PTCD1O75127 700 aaKnown RBP14.8□□□□□ -0.04
KRT40-203ENST00000461923 PDIA4P13667 645 aaKnown RBP14.8□□□□□ -0.04
KRT40-203ENST00000461923 ZNF609O15014 1411 aa14.8□□□□□ -0.04
KRT40-203ENST00000461923 SPATA31A3Q5VYP0 1347 aa14.8□□□□□ -0.04
KRT40-203ENST00000461923 SPEF2Q9C093 1822 aa14.8□□□□□ -0.04
KRT40-203ENST00000461923 MCM5P33992 734 aa14.8□□□□□ -0.04
KRT40-203ENST00000461923 TOB2Q14106 344 aaPredicted RBP14.8□□□□□ -0.04
KRT40-203ENST00000461923 UVSSAQ2YD98 709 aa14.8□□□□□ -0.04
KRT40-203ENST00000461923 ABCA3Q99758 1704 aa14.79□□□□□ -0.04
KRT40-203ENST00000461923 KLHL34Q8N239 644 aa14.79□□□□□ -0.04
KRT40-203ENST00000461923 TCEANC2Q96MN5 208 aa14.79□□□□□ -0.04
KRT40-203ENST00000461923 KCPQ6ZWJ8 1503 aa14.79□□□□□ -0.04
KRT40-203ENST00000461923 LARP1BQ659C4 914 aaKnown RBP14.78□□□□□ -0.04
KRT40-203ENST00000461923 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.78□□□□□ -0.04
KRT40-203ENST00000461923 CADPS2Q86UW7 1296 aa14.78□□□□□ -0.04
KRT40-203ENST00000461923 HAUS7Q99871 368 aa14.78□□□□□ -0.04
KRT40-203ENST00000461923 DBNDD2Q9BQY9 259 aa14.78□□□□□ -0.04
KRT40-203ENST00000461923 MYH7P12883 1935 aa14.78□□□□□ -0.04
KRT40-203ENST00000461923 NBPF26B4DH59 902 aa14.77□□□□□ -0.04
KRT40-203ENST00000461923 PDCP20941 246 aa14.77□□□□□ -0.04
KRT40-203ENST00000461923 NBPF14Q5TI25 921 aa14.77□□□□□ -0.04
KRT40-203ENST00000461923 NBPF10Q6P3W6 841 aaKnown RBP14.77□□□□□ -0.04
KRT40-203ENST00000461923 CDC37L1Q7L3B6 337 aa14.77□□□□□ -0.04
KRT40-203ENST00000461923 NBPF15Q8N660 670 aa14.77□□□□□ -0.04
KRT40-203ENST00000461923 FUCA2Q9BTY2 467 aa14.77□□□□□ -0.04
KRT40-203ENST00000461923 NDUFB9Q9Y6M9 179 aa14.77□□□□□ -0.04
KRT40-203ENST00000461923 FOXO4P98177 505 aa14.77□□□□□ -0.05
KRT40-203ENST00000461923 KRT32Q14532 448 aa14.77□□□□□ -0.05
KRT40-203ENST00000461923 LMBR1LQ6UX01 489 aa14.77□□□□□ -0.05
KRT40-203ENST00000461923 H7C1W4 665 aa14.76□□□□□ -0.05
KRT40-203ENST00000461923 HCLS1P14317 486 aaPredicted RBP14.76□□□□□ -0.05
KRT40-203ENST00000461923 TPRNQ4KMQ1 711 aa14.76□□□□□ -0.05
KRT40-203ENST00000461923 DNAJC2Q99543 621 aaKnown RBP14.76□□□□□ -0.05
KRT40-203ENST00000461923 TOGARAM1Q9Y4F4 1720 aa14.76□□□□□ -0.05
KRT40-203ENST00000461923 ELP1O95163 1332 aa14.76□□□□□ -0.05
KRT40-203ENST00000461923 PCDH11XQ9BZA7 1347 aa14.76□□□□□ -0.05
KRT40-203ENST00000461923 PCDH11YQ9BZA8 1340 aa14.76□□□□□ -0.05
KRT40-203ENST00000461923 PALLDQ8WX93 1383 aa14.75□□□□□ -0.05
KRT40-203ENST00000461923 CHGBP05060 677 aa14.75□□□□□ -0.05
KRT40-203ENST00000461923 TPM2P07951 284 aa14.75□□□□□ -0.05
KRT40-203ENST00000461923 SEC62Q99442 399 aaKnown RBP14.75□□□□□ -0.05
KRT40-203ENST00000461923 SH3TC1Q8TE82 1336 aa14.75□□□□□ -0.05
KRT40-203ENST00000461923 KRT85P78386 507 aa14.75□□□□□ -0.05
KRT40-203ENST00000461923 MCMDC2Q4G0Z9 681 aa14.75□□□□□ -0.05
KRT40-203ENST00000461923 CCDC129Q6ZRS4 1044 aa14.75□□□□□ -0.05
KRT40-203ENST00000461923 TTC6Q86TZ1 520 aa14.75□□□□□ -0.05
KRT40-203ENST00000461923 U3KPZ7 1027 aaPredicted RBP14.75□□□□□ -0.05
KRT40-203ENST00000461923 GIMAP6Q6P9H5 292 aa14.74□□□□□ -0.05
KRT40-203ENST00000461923 DDX46Q7L014 1031 aaKnown RBP14.74□□□□□ -0.05
KRT40-203ENST00000461923 ATG9AQ7Z3C6 839 aa14.74□□□□□ -0.05
KRT40-203ENST00000461923 FERMT3Q86UX7 667 aa14.74□□□□□ -0.05
KRT40-203ENST00000461923 KBTBD3Q8NAB2 608 aa14.74□□□□□ -0.05
KRT40-203ENST00000461923 NEK1Q96PY6 1258 aa14.74□□□□□ -0.05
KRT40-203ENST00000461923 USP25Q9UHP3 1055 aa14.74□□□□□ -0.05
KRT40-203ENST00000461923 WDR17Q8IZU2 1322 aa14.74□□□□□ -0.05
KRT40-203ENST00000461923 COL5A2P05997 1499 aaPredicted RBP14.74□□□□□ -0.05
KRT40-203ENST00000461923 TTLL7Q6ZT98 887 aa14.74□□□□□ -0.05
KRT40-203ENST00000461923 GTF3C6Q969F1 213 aa14.74□□□□□ -0.05
KRT40-203ENST00000461923 CWC25Q9NXE8 425 aaPredicted RBP14.74□□□□□ -0.05
KRT40-203ENST00000461923 CYP21A2P08686 494 aa14.73□□□□□ -0.05
KRT40-203ENST00000461923 TERF1P54274 439 aa14.73□□□□□ -0.05
KRT40-203ENST00000461923 STK3Q13188 491 aa14.73□□□□□ -0.05
KRT40-203ENST00000461923 ERVV-2B6SEH9 535 aa14.72□□□□□ -0.05
KRT40-203ENST00000461923 PTMAP06454 111 aaKnown RBP14.72□□□□□ -0.05
KRT40-203ENST00000461923 FAM173BQ6P4H8 233 aa14.72□□□□□ -0.05
KRT40-203ENST00000461923 ZCRB1Q8TBF4 217 aaKnown RBP14.72□□□□□ -0.05
KRT40-203ENST00000461923 GPR108Q9NPR9 543 aa14.72□□□□□ -0.05
KRT40-203ENST00000461923 CHMP3Q9Y3E7 222 aa14.72□□□□□ -0.05
KRT40-203ENST00000461923 MYH3P11055 1940 aa14.72□□□□□ -0.05
KRT40-203ENST00000461923 DDX60Q8IY21 1712 aaKnown RBP14.72□□□□□ -0.05
KRT40-203ENST00000461923 NWD2Q9ULI1 1742 aa14.72□□□□□ -0.05
KRT40-203ENST00000461923 TNS2Q63HR2 1409 aa14.72□□□□□ -0.05
KRT40-203ENST00000461923 Q6ZUG5 572 aa14.72□□□□□ -0.05
KRT40-203ENST00000461923 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.72□□□□□ -0.05
KRT40-203ENST00000461923 ITGB4P16144 1822 aa14.71□□□□□ -0.05
KRT40-203ENST00000461923 TICAM2Q86XR7 235 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms