RNA–Protein interactions for RNA: ENST00000461004.1

RTN4-212, Transcript of reticulon 4, humanhuman

TSL 3

Gene RTN4, Length 422 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-212ENST00000461004 TJP1Q07157 1748 aa9.54□□□□□ -0.88
RTN4-212ENST00000461004 HEG1Q9ULI3 1381 aa9.54□□□□□ -0.88
RTN4-212ENST00000461004 MYH14Q7Z406 1995 aaKnown RBP9.54□□□□□ -0.88
RTN4-212ENST00000461004 CHL1O00533 1208 aa9.54□□□□□ -0.88
RTN4-212ENST00000461004 A1BGP04217 495 aa9.54□□□□□ -0.88
RTN4-212ENST00000461004 LMOD3Q0VAK6 560 aa9.54□□□□□ -0.88
RTN4-212ENST00000461004 SAMD7Q7Z3H4 446 aa9.54□□□□□ -0.88
RTN4-212ENST00000461004 MRPL50Q8N5N7 158 aaKnown RBP9.54□□□□□ -0.88
RTN4-212ENST00000461004 ZFRQ96KR1 1074 aaKnown RBP9.54□□□□□ -0.88
RTN4-212ENST00000461004 FMNL2Q96PY5 1086 aa9.54□□□□□ -0.88
RTN4-212ENST00000461004 C4BP0C0L5 1744 aa9.53□□□□□ -0.88
RTN4-212ENST00000461004 UBR2Q8IWV8 1755 aa9.53□□□□□ -0.88
RTN4-212ENST00000461004 ZNF853P0CG23 659 aa9.53□□□□□ -0.88
RTN4-212ENST00000461004 RC3H1Q5TC82 1133 aaKnown RBP9.53□□□□□ -0.88
RTN4-212ENST00000461004 ZBTB1Q9Y2K1 713 aa9.53□□□□□ -0.88
RTN4-212ENST00000461004 TUBGCP6Q96RT7 1819 aa9.53□□□□□ -0.88
RTN4-212ENST00000461004 CNTNAP4Q9C0A0 1308 aa9.53□□□□□ -0.88
RTN4-212ENST00000461004 DDX11L8A8MPP1 907 aa9.52□□□□□ -0.89
RTN4-212ENST00000461004 GIGYF1O75420 1035 aaPredicted RBP9.52□□□□□ -0.89
RTN4-212ENST00000461004 RPS6KA4O75676 772 aa9.52□□□□□ -0.89
RTN4-212ENST00000461004 SLC10A3P09131 477 aa9.52□□□□□ -0.89
RTN4-212ENST00000461004 SNRPA1P09661 255 aaKnown RBP9.52□□□□□ -0.89
RTN4-212ENST00000461004 CANXP27824 592 aaKnown RBP9.52□□□□□ -0.89
RTN4-212ENST00000461004 CCDC27Q2M243 656 aa9.52□□□□□ -0.89
RTN4-212ENST00000461004 MSL1Q68DK7 614 aa9.52□□□□□ -0.89
RTN4-212ENST00000461004 TSR2Q969E8 191 aaKnown RBP9.52□□□□□ -0.89
RTN4-212ENST00000461004 BEGAINQ9BUH8 593 aa9.52□□□□□ -0.89
RTN4-212ENST00000461004 MBIPQ9NS73 344 aa9.52□□□□□ -0.89
RTN4-212ENST00000461004 CCDC87Q9NVE4 849 aa9.52□□□□□ -0.89
RTN4-212ENST00000461004 SRP68Q9UHB9 627 aaKnown RBP9.52□□□□□ -0.89
RTN4-212ENST00000461004 COL5A3P25940 1745 aaPredicted RBP9.51□□□□□ -0.89
RTN4-212ENST00000461004 KDM3BQ7LBC6 1761 aa9.51□□□□□ -0.89
RTN4-212ENST00000461004 CD46P15529 392 aa9.51□□□□□ -0.89
RTN4-212ENST00000461004 TMEM132AQ24JP5 1023 aa9.51□□□□□ -0.89
RTN4-212ENST00000461004 NBPF10Q6P3W6 841 aaKnown RBP9.51□□□□□ -0.89
RTN4-212ENST00000461004 NBPF15Q8N660 670 aa9.51□□□□□ -0.89
RTN4-212ENST00000461004 NECTIN2Q92692 538 aa9.51□□□□□ -0.89
RTN4-212ENST00000461004 RTCBQ9Y3I0 505 aaKnown RBP9.51□□□□□ -0.89
RTN4-212ENST00000461004 CASZ1Q86V15 1759 aa9.5□□□□□ -0.89
RTN4-212ENST00000461004 ELL2O00472 640 aaPredicted RBP9.5□□□□□ -0.89
RTN4-212ENST00000461004 STARD3NLO95772 234 aa9.5□□□□□ -0.89
RTN4-212ENST00000461004 EIF2S2P20042 333 aaKnown RBP9.5□□□□□ -0.89
RTN4-212ENST00000461004 SSFA2P28290 1259 aa9.5□□□□□ -0.89
RTN4-212ENST00000461004 TRAPPC3LQ5T215 181 aa9.5□□□□□ -0.89
RTN4-212ENST00000461004 C8orf58Q8NAV2 365 aa9.5□□□□□ -0.89
RTN4-212ENST00000461004 IFT57Q9NWB7 429 aa9.5□□□□□ -0.89
RTN4-212ENST00000461004 ZNF831Q5JPB2 1677 aa9.5□□□□□ -0.89
RTN4-212ENST00000461004 UBR3Q6ZT12 1888 aa9.5□□□□□ -0.89
RTN4-212ENST00000461004 SOS1Q07889 1333 aaPredicted RBP9.5□□□□□ -0.89
RTN4-212ENST00000461004 ANXA1P04083 346 aa9.49□□□□□ -0.89
RTN4-212ENST00000461004 EIF5P55010 431 aaKnown RBP9.49□□□□□ -0.89
RTN4-212ENST00000461004 NGEFQ8N5V2 710 aa9.49□□□□□ -0.89
RTN4-212ENST00000461004 TSPYL6Q8N831 410 aa9.49□□□□□ -0.89
RTN4-212ENST00000461004 TEX13AQ9BXU3 409 aaPredicted RBP9.49□□□□□ -0.89
RTN4-212ENST00000461004 BABAM1Q9NWV8 329 aa9.49□□□□□ -0.89
RTN4-212ENST00000461004 ZNF330Q9Y3S2 320 aaPredicted RBP9.49□□□□□ -0.89
RTN4-212ENST00000461004 ZNF521Q96K83 1311 aa9.49□□□□□ -0.89
RTN4-212ENST00000461004 GYS1P13807 737 aa9.48□□□□□ -0.89
RTN4-212ENST00000461004 GNAI1P63096 354 aa9.48□□□□□ -0.89
RTN4-212ENST00000461004 PROSER3Q2NL68 480 aa9.48□□□□□ -0.89
RTN4-212ENST00000461004 DUSP27Q5VZP5 1158 aa9.48□□□□□ -0.89
RTN4-212ENST00000461004 DDRGK1Q96HY6 314 aa9.48□□□□□ -0.89
RTN4-212ENST00000461004 MTFR1LQ9H019 292 aa9.48□□□□□ -0.89
RTN4-212ENST00000461004 SPON1Q9HCB6 807 aa9.48□□□□□ -0.89
RTN4-212ENST00000461004 TBC1D2BQ9UPU7 963 aa9.48□□□□□ -0.89
RTN4-212ENST00000461004 CICQ96RK0 1608 aaPredicted RBP9.48□□□□□ -0.89
RTN4-212ENST00000461004 TCERG1O14776 1098 aaKnown RBP9.47□□□□□ -0.89
RTN4-212ENST00000461004 MYL6BP14649 208 aa9.47□□□□□ -0.89
RTN4-212ENST00000461004 RFC4P35249 363 aa9.47□□□□□ -0.89
RTN4-212ENST00000461004 CALD1Q05682 793 aaKnown RBP9.47□□□□□ -0.89
RTN4-212ENST00000461004 USPL1Q5W0Q7 1092 aa9.47□□□□□ -0.89
RTN4-212ENST00000461004 WDR63Q8IWG1 891 aa9.47□□□□□ -0.89
RTN4-212ENST00000461004 FLAD1Q8NFF5 587 aa9.47□□□□□ -0.89
RTN4-212ENST00000461004 IL16Q14005 1332 aa9.47□□□□□ -0.89
RTN4-212ENST00000461004 QSER1Q2KHR3 1735 aa9.46□□□□□ -0.89
RTN4-212ENST00000461004 IL6STP40189 918 aaPredicted RBP9.46□□□□□ -0.9
RTN4-212ENST00000461004 BCAMP50895 628 aa9.46□□□□□ -0.9
RTN4-212ENST00000461004 TTLL7Q6ZT98 887 aa9.46□□□□□ -0.9
RTN4-212ENST00000461004 LRP10Q7Z4F1 713 aa9.46□□□□□ -0.9
RTN4-212ENST00000461004 SULF1Q8IWU6 871 aa9.46□□□□□ -0.9
RTN4-212ENST00000461004 SLC16A10Q8TF71 515 aa9.46□□□□□ -0.9
RTN4-212ENST00000461004 ARXQ96QS3 562 aa9.46□□□□□ -0.9
RTN4-212ENST00000461004 USP42Q9H9J4 1324 aaKnown RBP9.46□□□□□ -0.9
RTN4-212ENST00000461004 FANCIQ9NVI1 1328 aa9.46□□□□□ -0.9
RTN4-212ENST00000461004 COL15A1P39059 1388 aa9.46□□□□□ -0.9
RTN4-212ENST00000461004 HMGB2P26583 209 aaKnown RBP9.45□□□□□ -0.9
RTN4-212ENST00000461004 EXOSC9Q06265 439 aaKnown RBP9.45□□□□□ -0.9
RTN4-212ENST00000461004 RDH13Q8NBN7 331 aa9.45□□□□□ -0.9
RTN4-212ENST00000461004 CHPF2Q9P2E5 772 aa9.45□□□□□ -0.9
RTN4-212ENST00000461004 NARFQ9UHQ1 456 aa9.45□□□□□ -0.9
RTN4-212ENST00000461004 SRCAPQ6ZRS2 3230 aa9.45□□□□□ -0.9
RTN4-212ENST00000461004 SOWAHBA6NEL2 793 aa9.44□□□□□ -0.9
RTN4-212ENST00000461004 ZPR1O75312 459 aa9.44□□□□□ -0.9
RTN4-212ENST00000461004 CAMTA2O94983 1202 aa9.44□□□□□ -0.9
RTN4-212ENST00000461004 MMP10P09238 476 aa9.44□□□□□ -0.9
RTN4-212ENST00000461004 HNRNPUQ00839 825 aaKnown RBP eCLIP9.44□□□□□ -0.9
RTN4-212ENST00000461004 DDR1Q08345 913 aa9.44□□□□□ -0.9
RTN4-212ENST00000461004 SLFN5Q08AF3 891 aa9.44□□□□□ -0.9
RTN4-212ENST00000461004 HLFQ16534 295 aa9.44□□□□□ -0.9
RTN4-212ENST00000461004 HDGFL1Q5TGJ6 251 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms