RNA–Protein interactions for RNA: ENST00000460657.1

CPNE6-202, Transcript of copine 6, humanhuman

TSL 2

Gene CPNE6, Length 4,540 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6-202ENST00000460657 FILIP1LQ4L180 1135 aa14.07□□□□□ -0.16
CPNE6-202ENST00000460657 GPT2Q8TD30 523 aa14.07□□□□□ -0.16
CPNE6-202ENST00000460657 GNL3LQ9NVN8 582 aaKnown RBP14.07□□□□□ -0.16
CPNE6-202ENST00000460657 RGS12O14924 1447 aa14.07□□□□□ -0.16
CPNE6-202ENST00000460657 CAMSAP1Q5T5Y3 1602 aa14.07□□□□□ -0.16
CPNE6-202ENST00000460657 TDO2P48775 406 aa14.07□□□□□ -0.16
CPNE6-202ENST00000460657 C16orf45Q96MC5 204 aaPredicted RBP14.07□□□□□ -0.16
CPNE6-202ENST00000460657 SNRKQ9NRH2 765 aa14.07□□□□□ -0.16
CPNE6-202ENST00000460657 SLC27A2O14975 620 aa14.07□□□□□ -0.16
CPNE6-202ENST00000460657 USP16Q9Y5T5 823 aa14.07□□□□□ -0.16
CPNE6-202ENST00000460657 ADGRB1O14514 1584 aa14.07□□□□□ -0.16
CPNE6-202ENST00000460657 NEXMIFQ5QGS0 1516 aa14.07□□□□□ -0.16
CPNE6-202ENST00000460657 CHRNA2Q15822 529 aa14.07□□□□□ -0.16
CPNE6-202ENST00000460657 PTPRMP28827 1452 aa14.06□□□□□ -0.16
CPNE6-202ENST00000460657 TFCP2Q12800 502 aa14.06□□□□□ -0.16
CPNE6-202ENST00000460657 NUP133Q8WUM0 1156 aa14.06□□□□□ -0.16
CPNE6-202ENST00000460657 ORC3Q9UBD5 711 aaPredicted RBP14.06□□□□□ -0.16
CPNE6-202ENST00000460657 RPS6KB1P23443 525 aa14.06□□□□□ -0.16
CPNE6-202ENST00000460657 BEND3Q5T5X7 828 aa14.06□□□□□ -0.16
CPNE6-202ENST00000460657 FAM227BQ96M60 508 aa14.06□□□□□ -0.16
CPNE6-202ENST00000460657 VWDEQ8N2E2 1590 aa14.06□□□□□ -0.16
CPNE6-202ENST00000460657 SUCLG2Q96I99 432 aa14.06□□□□□ -0.16
CPNE6-202ENST00000460657 PCMTD1Q96MG8 357 aaPredicted RBP14.06□□□□□ -0.16
CPNE6-202ENST00000460657 ARHGEF40Q8TER5 1519 aa14.06□□□□□ -0.16
CPNE6-202ENST00000460657 ZFYP08048 801 aaPredicted RBP14.05□□□□□ -0.16
CPNE6-202ENST00000460657 PIP4K2AP48426 406 aaPredicted RBP14.05□□□□□ -0.16
CPNE6-202ENST00000460657 HAND2P61296 217 aa14.05□□□□□ -0.16
CPNE6-202ENST00000460657 CUL4AQ13619 759 aa14.05□□□□□ -0.16
CPNE6-202ENST00000460657 ZNF790Q6PG37 636 aa14.05□□□□□ -0.16
CPNE6-202ENST00000460657 CCDC186Q7Z3E2 898 aa14.05□□□□□ -0.16
CPNE6-202ENST00000460657 UBAC1Q9BSL1 405 aa14.05□□□□□ -0.16
CPNE6-202ENST00000460657 KIDINS220Q9ULH0 1771 aa14.05□□□□□ -0.16
CPNE6-202ENST00000460657 GSDMDP57764 484 aa14.05□□□□□ -0.16
CPNE6-202ENST00000460657 CFAP100Q494V2 611 aa14.05□□□□□ -0.16
CPNE6-202ENST00000460657 HSP90AB3PQ58FF7 597 aa14.05□□□□□ -0.16
CPNE6-202ENST00000460657 PAG1Q9NWQ8 432 aa14.05□□□□□ -0.16
CPNE6-202ENST00000460657 A0A0U1RQG5 324 aaPredicted RBP14.05□□□□□ -0.16
CPNE6-202ENST00000460657 SLC3A2P08195 630 aaKnown RBP14.05□□□□□ -0.16
CPNE6-202ENST00000460657 NCOA7Q8NI08 942 aa14.05□□□□□ -0.16
CPNE6-202ENST00000460657 KIF18AQ8NI77 898 aa14.05□□□□□ -0.16
CPNE6-202ENST00000460657 UNC5CLQ8IV45 518 aa14.05□□□□□ -0.16
CPNE6-202ENST00000460657 STK11IPQ8N1F8 1099 aa14.05□□□□□ -0.16
CPNE6-202ENST00000460657 UBE2Q2Q8WVN8 375 aa14.05□□□□□ -0.16
CPNE6-202ENST00000460657 METTL22Q9BUU2 404 aaPredicted RBP14.05□□□□□ -0.16
CPNE6-202ENST00000460657 DCAF5Q96JK2 942 aa14.04□□□□□ -0.16
CPNE6-202ENST00000460657 NAPBQ9H115 298 aa14.04□□□□□ -0.16
CPNE6-202ENST00000460657 PPFIA3O75145 1194 aa14.04□□□□□ -0.16
CPNE6-202ENST00000460657 DHX32Q7L7V1 743 aaKnown RBP14.04□□□□□ -0.16
CPNE6-202ENST00000460657 DNAJC25Q9H1X3 360 aa14.04□□□□□ -0.16
CPNE6-202ENST00000460657 DEPDC5O75140 1603 aa14.04□□□□□ -0.16
CPNE6-202ENST00000460657 ANKRD18BA2A2Z9 1011 aa14.04□□□□□ -0.16
CPNE6-202ENST00000460657 TERF1P54274 439 aa14.04□□□□□ -0.16
CPNE6-202ENST00000460657 CCDC70Q6NSX1 233 aa14.04□□□□□ -0.16
CPNE6-202ENST00000460657 POLR3DP05423 398 aaPredicted RBP14.03□□□□□ -0.16
CPNE6-202ENST00000460657 TEX13AQ9BXU3 409 aaPredicted RBP14.03□□□□□ -0.16
CPNE6-202ENST00000460657 KCNQ3O43525 872 aa14.03□□□□□ -0.16
CPNE6-202ENST00000460657 LDHAL6AQ6ZMR3 332 aa14.03□□□□□ -0.16
CPNE6-202ENST00000460657 SMARCE1Q969G3 411 aa14.03□□□□□ -0.16
CPNE6-202ENST00000460657 CHAMP1Q96JM3 812 aa14.03□□□□□ -0.16
CPNE6-202ENST00000460657 KIF2CQ99661 725 aa14.03□□□□□ -0.16
CPNE6-202ENST00000460657 TMX4Q9H1E5 349 aaPredicted RBP14.03□□□□□ -0.16
CPNE6-202ENST00000460657 LRP2BPQ9P2M1 347 aa14.03□□□□□ -0.16
CPNE6-202ENST00000460657 TXLNAP40222 546 aa14.03□□□□□ -0.16
CPNE6-202ENST00000460657 NLRP1Q9C000 1473 aa14.03□□□□□ -0.16
CPNE6-202ENST00000460657 KLF18A0A0U1RQI7 1052 aa14.03□□□□□ -0.16
CPNE6-202ENST00000460657 GIGYF1O75420 1035 aaPredicted RBP14.03□□□□□ -0.16
CPNE6-202ENST00000460657 TTF1Q15361 905 aaPredicted RBP14.03□□□□□ -0.16
CPNE6-202ENST00000460657 TNNI3KQ59H18 835 aa14.03□□□□□ -0.16
CPNE6-202ENST00000460657 CADPS2Q86UW7 1296 aa14.03□□□□□ -0.16
CPNE6-202ENST00000460657 KLHDC4Q8TBB5 520 aa14.03□□□□□ -0.16
CPNE6-202ENST00000460657 FPGT-TNNI3KV9GXZ4 949 aa14.03□□□□□ -0.16
CPNE6-202ENST00000460657 MAP3K12Q12852 859 aa14.02□□□□□ -0.16
CPNE6-202ENST00000460657 PPFIBP1Q86W92 1011 aa14.02□□□□□ -0.16
CPNE6-202ENST00000460657 MRPS27Q92552 414 aaKnown RBP14.02□□□□□ -0.16
CPNE6-202ENST00000460657 CEP131Q9UPN4 1083 aa14.02□□□□□ -0.16
CPNE6-202ENST00000460657 CCDC196A0A1B0GTZ2 297 aa14.02□□□□□ -0.17
CPNE6-202ENST00000460657 KCNG4Q8TDN1 519 aa14.02□□□□□ -0.17
CPNE6-202ENST00000460657 LSG1Q9H089 658 aaKnown RBP14.02□□□□□ -0.17
CPNE6-202ENST00000460657 TRMT112Q9UI30 125 aaKnown RBP14.02□□□□□ -0.17
CPNE6-202ENST00000460657 KDRP35968 1356 aa14.02□□□□□ -0.17
CPNE6-202ENST00000460657 IGHMBP2P38935 993 aaKnown RBP14.02□□□□□ -0.17
CPNE6-202ENST00000460657 SLC12A7Q9Y666 1083 aa14.02□□□□□ -0.17
CPNE6-202ENST00000460657 ZC3H13Q5T200 1668 aaKnown RBP14.01□□□□□ -0.17
CPNE6-202ENST00000460657 PTPDC1A2A3K4 754 aa14.01□□□□□ -0.17
CPNE6-202ENST00000460657 GOLGA8AA7E2F4 631 aa14.01□□□□□ -0.17
CPNE6-202ENST00000460657 GCKRQ14397 625 aa14.01□□□□□ -0.17
CPNE6-202ENST00000460657 ZCRB1Q8TBF4 217 aaKnown RBP14.01□□□□□ -0.17
CPNE6-202ENST00000460657 PAXBP1Q9Y5B6 917 aa14.01□□□□□ -0.17
CPNE6-202ENST00000460657 BIN1O00499 593 aa14.01□□□□□ -0.17
CPNE6-202ENST00000460657 RNF113AO15541 343 aaKnown RBP14.01□□□□□ -0.17
CPNE6-202ENST00000460657 PTH1RQ03431 593 aa14.01□□□□□ -0.17
CPNE6-202ENST00000460657 PKNOX2Q96KN3 472 aa14.01□□□□□ -0.17
CPNE6-202ENST00000460657 TRMT1Q9NXH9 659 aaKnown RBP14.01□□□□□ -0.17
CPNE6-202ENST00000460657 IARSP41252 1262 aaKnown RBP14.01□□□□□ -0.17
CPNE6-202ENST00000460657 APOBRQ0VD83 1088 aa14.01□□□□□ -0.17
CPNE6-202ENST00000460657 FAM173BQ6P4H8 233 aa14.01□□□□□ -0.17
CPNE6-202ENST00000460657 LUZP1Q86V48 1076 aa14.01□□□□□ -0.17
CPNE6-202ENST00000460657 ZSWIM6Q9HCJ5 1215 aa14.01□□□□□ -0.17
CPNE6-202ENST00000460657 ZNF500O60304 480 aaPredicted RBP14□□□□□ -0.17
CPNE6-202ENST00000460657 GPTP24298 496 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms