RNA–Protein interactions for RNA: ENST00000458591.6

SCFD1-203, Transcript of sec1 family domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCFD1, Length 2,359 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-203ENST00000458591 MTERF4Q7Z6M4 381 aaKnown RBP16.82■□□□□ 0.28
SCFD1-203ENST00000458591 CHMP4AQ9BY43 222 aa16.82■□□□□ 0.28
SCFD1-203ENST00000458591 DACT1Q9NYF0 836 aa16.82■□□□□ 0.28
SCFD1-203ENST00000458591 MED23Q9ULK4 1368 aa16.82■□□□□ 0.28
SCFD1-203ENST00000458591 A0A0G2JLW4 131 aa16.81■□□□□ 0.28
SCFD1-203ENST00000458591 DYNC1I1O14576 645 aa16.81■□□□□ 0.28
SCFD1-203ENST00000458591 KRT85P78386 507 aa16.81■□□□□ 0.28
SCFD1-203ENST00000458591 DBNDD2Q9BQY9 259 aa16.81■□□□□ 0.28
SCFD1-203ENST00000458591 NLRP2Q9NX02 1062 aa16.81■□□□□ 0.28
SCFD1-203ENST00000458591 MRVI1Q9Y6F6 885 aa16.81■□□□□ 0.28
SCFD1-203ENST00000458591 FER1L4A9Z1Z3 1794 aa16.81■□□□□ 0.28
SCFD1-203ENST00000458591 PSMA5P28066 241 aa16.81■□□□□ 0.28
SCFD1-203ENST00000458591 PTPN12Q05209 780 aaKnown RBP16.81■□□□□ 0.28
SCFD1-203ENST00000458591 DDX46Q7L014 1031 aaKnown RBP16.81■□□□□ 0.28
SCFD1-203ENST00000458591 UBE3BQ7Z3V4 1068 aa16.81■□□□□ 0.28
SCFD1-203ENST00000458591 CEBPZQ03701 1054 aaKnown RBP16.8■□□□□ 0.28
SCFD1-203ENST00000458591 KRT28Q7Z3Y7 464 aa16.8■□□□□ 0.28
SCFD1-203ENST00000458591 RFX5P48382 616 aaPredicted RBP16.8■□□□□ 0.28
SCFD1-203ENST00000458591 SNRKQ9NRH2 765 aa16.8■□□□□ 0.28
SCFD1-203ENST00000458591 HIP1O00291 1037 aa16.79■□□□□ 0.28
SCFD1-203ENST00000458591 TYRO3Q06418 890 aa16.79■□□□□ 0.28
SCFD1-203ENST00000458591 NEXNQ0ZGT2 675 aa16.79■□□□□ 0.28
SCFD1-203ENST00000458591 TNNI3KQ59H18 835 aa16.79■□□□□ 0.28
SCFD1-203ENST00000458591 CABLES1Q8TDN4 633 aa16.79■□□□□ 0.28
SCFD1-203ENST00000458591 PGBD1Q96JS3 809 aa16.79■□□□□ 0.28
SCFD1-203ENST00000458591 SPATA32Q96LK8 384 aa16.79■□□□□ 0.28
SCFD1-203ENST00000458591 METTL22Q9BUU2 404 aaPredicted RBP16.79■□□□□ 0.28
SCFD1-203ENST00000458591 NUP62CLQ9H1M0 184 aa16.79■□□□□ 0.28
SCFD1-203ENST00000458591 SLC52A2Q9HAB3 445 aa16.79■□□□□ 0.28
SCFD1-203ENST00000458591 FPGT-TNNI3KV9GXZ4 949 aa16.79■□□□□ 0.28
SCFD1-203ENST00000458591 NR1I2O75469 434 aa16.79■□□□□ 0.28
SCFD1-203ENST00000458591 ANKRD13DQ6ZTN6 518 aa16.79■□□□□ 0.28
SCFD1-203ENST00000458591 Q6ZUG5 572 aa16.79■□□□□ 0.28
SCFD1-203ENST00000458591 A0A087WWV3 80 aa16.78■□□□□ 0.28
SCFD1-203ENST00000458591 CCDC192P0DO97 292 aa16.78■□□□□ 0.28
SCFD1-203ENST00000458591 RNF20Q5VTR2 975 aa16.78■□□□□ 0.28
SCFD1-203ENST00000458591 LEO1Q8WVC0 666 aaPredicted RBP16.78■□□□□ 0.28
SCFD1-203ENST00000458591 FTOQ9C0B1 505 aaKnown RBP eCLIP16.78■□□□□ 0.28
SCFD1-203ENST00000458591 NRBP1Q9UHY1 535 aa16.78■□□□□ 0.28
SCFD1-203ENST00000458591 KDM6AO15550 1401 aaPredicted RBP16.78■□□□□ 0.28
SCFD1-203ENST00000458591 CYP21A2P08686 494 aa16.78■□□□□ 0.28
SCFD1-203ENST00000458591 PTGS1P23219 599 aa16.78■□□□□ 0.28
SCFD1-203ENST00000458591 MAP3K11Q16584 847 aa16.78■□□□□ 0.28
SCFD1-203ENST00000458591 ANO6Q4KMQ2 910 aa16.78■□□□□ 0.28
SCFD1-203ENST00000458591 STOX1Q6ZVD7 989 aa16.78■□□□□ 0.28
SCFD1-203ENST00000458591 LRP10Q7Z4F1 713 aa16.78■□□□□ 0.28
SCFD1-203ENST00000458591 BRF1Q92994 677 aa16.78■□□□□ 0.28
SCFD1-203ENST00000458591 ERBB3P21860 1342 aa16.77■□□□□ 0.28
SCFD1-203ENST00000458591 ADGRL3Q9HAR2 1447 aa16.77■□□□□ 0.28
SCFD1-203ENST00000458591 HSP90B1P14625 803 aaKnown RBP16.77■□□□□ 0.28
SCFD1-203ENST00000458591 MYRIPQ8NFW9 859 aa16.77■□□□□ 0.28
SCFD1-203ENST00000458591 ZNF609O15014 1411 aa16.77■□□□□ 0.27
SCFD1-203ENST00000458591 PHKG2P15735 406 aa16.77■□□□□ 0.27
SCFD1-203ENST00000458591 CHRNA2Q15822 529 aa16.77■□□□□ 0.27
SCFD1-203ENST00000458591 ZNF710Q8N1W2 664 aa16.77■□□□□ 0.27
SCFD1-203ENST00000458591 RAPGEF4Q8WZA2 1011 aa16.77■□□□□ 0.27
SCFD1-203ENST00000458591 NEK1Q96PY6 1258 aa16.77■□□□□ 0.27
SCFD1-203ENST00000458591 TNMDQ9H2S6 317 aa16.77■□□□□ 0.27
SCFD1-203ENST00000458591 CBX8Q9HC52 389 aa16.77■□□□□ 0.27
SCFD1-203ENST00000458591 HDAC5Q9UQL6 1122 aa16.77■□□□□ 0.27
SCFD1-203ENST00000458591 NCAPD2Q15021 1401 aa16.76■□□□□ 0.27
SCFD1-203ENST00000458591 NPHP3Q7Z494 1330 aa16.76■□□□□ 0.27
SCFD1-203ENST00000458591 LRMPQ12912 555 aa16.76■□□□□ 0.27
SCFD1-203ENST00000458591 A0A087WZG4 1122 aa16.75■□□□□ 0.27
SCFD1-203ENST00000458591 GOLGA6L4A6NEF3 574 aa16.75■□□□□ 0.27
SCFD1-203ENST00000458591 ATP5JP18859 108 aa16.75■□□□□ 0.27
SCFD1-203ENST00000458591 KIAA1524Q8TCG1 905 aa16.75■□□□□ 0.27
SCFD1-203ENST00000458591 SCRN1Q12765 414 aa16.75■□□□□ 0.27
SCFD1-203ENST00000458591 CHST3Q7LGC8 479 aa16.75■□□□□ 0.27
SCFD1-203ENST00000458591 FAM200AQ8TCP9 573 aa16.75■□□□□ 0.27
SCFD1-203ENST00000458591 GTF3C6Q969F1 213 aa16.75■□□□□ 0.27
SCFD1-203ENST00000458591 COPRSQ9NQ92 184 aa16.75■□□□□ 0.27
SCFD1-203ENST00000458591 TIMM10P62072 90 aa16.74■□□□□ 0.27
SCFD1-203ENST00000458591 ANKRD1Q15327 319 aa16.74■□□□□ 0.27
SCFD1-203ENST00000458591 USPL1Q5W0Q7 1092 aa16.74■□□□□ 0.27
SCFD1-203ENST00000458591 BICD2Q8TD16 824 aa16.74■□□□□ 0.27
SCFD1-203ENST00000458591 DNAJC25Q9H1X3 360 aa16.74■□□□□ 0.27
SCFD1-203ENST00000458591 SPTLC3Q9NUV7 552 aa16.74■□□□□ 0.27
SCFD1-203ENST00000458591 RESTQ13127 1097 aa16.74■□□□□ 0.27
SCFD1-203ENST00000458591 LMBR1LQ6UX01 489 aa16.74■□□□□ 0.27
SCFD1-203ENST00000458591 NEUROD6Q96NK8 337 aa16.74■□□□□ 0.27
SCFD1-203ENST00000458591 CHD2O14647 1828 aaKnown RBP16.74■□□□□ 0.27
SCFD1-203ENST00000458591 CYP27B1O15528 508 aa16.73■□□□□ 0.27
SCFD1-203ENST00000458591 PDCP20941 246 aa16.73■□□□□ 0.27
SCFD1-203ENST00000458591 CCT2P78371 535 aaKnown RBP16.73■□□□□ 0.27
SCFD1-203ENST00000458591 CCDC186Q7Z3E2 898 aa16.73■□□□□ 0.27
SCFD1-203ENST00000458591 C5P01031 1676 aa16.73■□□□□ 0.27
SCFD1-203ENST00000458591 CSB-PGBD3P0DP91 1061 aa16.73■□□□□ 0.27
SCFD1-203ENST00000458591 GUCY1B3Q02153 619 aa16.73■□□□□ 0.27
SCFD1-203ENST00000458591 APOBRQ0VD83 1088 aa16.73■□□□□ 0.27
SCFD1-203ENST00000458591 TSGA10IPQ3SY00 556 aa16.73■□□□□ 0.27
SCFD1-203ENST00000458591 NCOA5Q9HCD5 579 aaKnown RBP16.73■□□□□ 0.27
SCFD1-203ENST00000458591 ELP1O95163 1332 aa16.73■□□□□ 0.27
SCFD1-203ENST00000458591 JCADQ9P266 1359 aa16.73■□□□□ 0.27
SCFD1-203ENST00000458591 GOLIM4O00461 696 aa16.72■□□□□ 0.27
SCFD1-203ENST00000458591 ERCC4Q92889 916 aaPredicted RBP16.72■□□□□ 0.27
SCFD1-203ENST00000458591 ZNF594Q96JF6 807 aaPredicted RBP16.72■□□□□ 0.27
SCFD1-203ENST00000458591 BCL11BQ9C0K0 894 aaPredicted RBP16.72■□□□□ 0.27
SCFD1-203ENST00000458591 NAP1L2Q9ULW6 460 aaPredicted RBP16.72■□□□□ 0.27
SCFD1-203ENST00000458591 TATP17735 454 aaPredicted RBP16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms