RNA–Protein interactions for RNA: ENST00000458046.6

SYNE2-207, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 2,669 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-207ENST00000458046 GYS2P54840 703 aa14.09□□□□□ -0.15
SYNE2-207ENST00000458046 SRCIN1Q9C0H9 1055 aa14.09□□□□□ -0.15
SYNE2-207ENST00000458046 LGR6Q9HBX8 967 aa14.09□□□□□ -0.15
SYNE2-207ENST00000458046 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.09□□□□□ -0.15
SYNE2-207ENST00000458046 ANXA1P04083 346 aa14.08□□□□□ -0.15
SYNE2-207ENST00000458046 TRPC5Q9UL62 973 aaPredicted RBP14.08□□□□□ -0.15
SYNE2-207ENST00000458046 SRGAP3O43295 1099 aa14.08□□□□□ -0.16
SYNE2-207ENST00000458046 ZNF500O60304 480 aaPredicted RBP14.08□□□□□ -0.16
SYNE2-207ENST00000458046 TBC1D12O60347 775 aa14.08□□□□□ -0.16
SYNE2-207ENST00000458046 NBPF7P0C2Y1 421 aaPredicted RBP14.08□□□□□ -0.16
SYNE2-207ENST00000458046 SSH3Q8TE77 659 aa14.08□□□□□ -0.16
SYNE2-207ENST00000458046 CUL4AQ13619 759 aa14.08□□□□□ -0.16
SYNE2-207ENST00000458046 C4orf46Q504U0 113 aa14.08□□□□□ -0.16
SYNE2-207ENST00000458046 EGFLAMQ63HQ2 1017 aa14.08□□□□□ -0.16
SYNE2-207ENST00000458046 ZNF280DQ6N043 979 aa14.08□□□□□ -0.16
SYNE2-207ENST00000458046 SOS1Q07889 1333 aaPredicted RBP14.07□□□□□ -0.16
SYNE2-207ENST00000458046 KCNQ3O43525 872 aa14.07□□□□□ -0.16
SYNE2-207ENST00000458046 NLGN1Q8N2Q7 840 aa14.07□□□□□ -0.16
SYNE2-207ENST00000458046 ZSCAN30Q86W11 494 aa14.07□□□□□ -0.16
SYNE2-207ENST00000458046 RHPN1Q8TCX5 695 aa14.07□□□□□ -0.16
SYNE2-207ENST00000458046 LARP6Q9BRS8 491 aaKnown RBP14.07□□□□□ -0.16
SYNE2-207ENST00000458046 GDPD2Q9HCC8 539 aa14.07□□□□□ -0.16
SYNE2-207ENST00000458046 RGPD8O14715 1765 aaPredicted RBP14.06□□□□□ -0.16
SYNE2-207ENST00000458046 DHX16O60231 1041 aaKnown RBP14.06□□□□□ -0.16
SYNE2-207ENST00000458046 CACTIN-AS1Q8N1I8 211 aa14.06□□□□□ -0.16
SYNE2-207ENST00000458046 GIPC2Q8TF65 315 aa14.06□□□□□ -0.16
SYNE2-207ENST00000458046 ZNF219Q9P2Y4 722 aaPredicted RBP14.06□□□□□ -0.16
SYNE2-207ENST00000458046 USTQ9Y2C2 406 aa14.06□□□□□ -0.16
SYNE2-207ENST00000458046 DISP2A7MBM2 1401 aa14.06□□□□□ -0.16
SYNE2-207ENST00000458046 SLIT1O75093 1534 aa14.06□□□□□ -0.16
SYNE2-207ENST00000458046 FMN2Q9NZ56 1722 aa14.06□□□□□ -0.16
SYNE2-207ENST00000458046 PI4KAP2A4QPH2 592 aa14.06□□□□□ -0.16
SYNE2-207ENST00000458046 NBPF6Q5VWK0 638 aa14.06□□□□□ -0.16
SYNE2-207ENST00000458046 PI4KAP1Q8N8J0 262 aa14.06□□□□□ -0.16
SYNE2-207ENST00000458046 NBPF4Q96M43 638 aa14.06□□□□□ -0.16
SYNE2-207ENST00000458046 PIK3C2AO00443 1686 aa14.05□□□□□ -0.16
SYNE2-207ENST00000458046 LRSAM1Q6UWE0 723 aa14.05□□□□□ -0.16
SYNE2-207ENST00000458046 CREBRFQ8IUR6 639 aa14.05□□□□□ -0.16
SYNE2-207ENST00000458046 RNF214Q8ND24 703 aa14.05□□□□□ -0.16
SYNE2-207ENST00000458046 RFX1P22670 979 aa14.05□□□□□ -0.16
SYNE2-207ENST00000458046 MSNP26038 577 aaKnown RBP14.05□□□□□ -0.16
SYNE2-207ENST00000458046 EIF4A1P60842 406 aaKnown RBP14.05□□□□□ -0.16
SYNE2-207ENST00000458046 E2F4Q16254 413 aa14.05□□□□□ -0.16
SYNE2-207ENST00000458046 PTPROQ16827 1216 aa14.05□□□□□ -0.16
SYNE2-207ENST00000458046 PI4K2BQ8TCG2 481 aa14.05□□□□□ -0.16
SYNE2-207ENST00000458046 TMEM94Q12767 1356 aa14.05□□□□□ -0.16
SYNE2-207ENST00000458046 hCG_2014768A0A024R1R8 64 aa14.04□□□□□ -0.16
SYNE2-207ENST00000458046 EVA1CP58658 441 aa14.04□□□□□ -0.16
SYNE2-207ENST00000458046 PPP4CP60510 307 aa14.04□□□□□ -0.16
SYNE2-207ENST00000458046 INTS4Q96HW7 963 aaKnown RBP14.04□□□□□ -0.16
SYNE2-207ENST00000458046 BABAM1Q9NWV8 329 aa14.04□□□□□ -0.16
SYNE2-207ENST00000458046 HDAC5Q9UQL6 1122 aa14.04□□□□□ -0.16
SYNE2-207ENST00000458046 WDHD1O75717 1129 aaPredicted RBP14.04□□□□□ -0.16
SYNE2-207ENST00000458046 HSPA4P34932 840 aa14.04□□□□□ -0.16
SYNE2-207ENST00000458046 ARHGEF10LQ9HCE6 1279 aa14.04□□□□□ -0.16
SYNE2-207ENST00000458046 DTNBO60941 627 aa14.03□□□□□ -0.16
SYNE2-207ENST00000458046 CWC27Q6UX04 472 aaKnown RBP14.03□□□□□ -0.16
SYNE2-207ENST00000458046 ATL2Q8NHH9 583 aa14.03□□□□□ -0.16
SYNE2-207ENST00000458046 DNAAF4Q8WXU2 420 aa14.03□□□□□ -0.16
SYNE2-207ENST00000458046 TMX4Q9H1E5 349 aaPredicted RBP14.03□□□□□ -0.16
SYNE2-207ENST00000458046 GOPCQ9HD26 462 aa14.03□□□□□ -0.16
SYNE2-207ENST00000458046 NRBP1Q9UHY1 535 aa14.03□□□□□ -0.16
SYNE2-207ENST00000458046 GADD45BO75293 160 aaPredicted RBP14.03□□□□□ -0.16
SYNE2-207ENST00000458046 BEND3Q5T5X7 828 aa14.03□□□□□ -0.16
SYNE2-207ENST00000458046 MPRIPQ6WCQ1 1025 aa14.03□□□□□ -0.16
SYNE2-207ENST00000458046 LRRC59Q96AG4 307 aaKnown RBP14.03□□□□□ -0.16
SYNE2-207ENST00000458046 KIF1BPQ96EK5 621 aa14.03□□□□□ -0.16
SYNE2-207ENST00000458046 SLAIN2Q9P270 581 aa14.03□□□□□ -0.16
SYNE2-207ENST00000458046 SPG7Q9UQ90 795 aa14.03□□□□□ -0.16
SYNE2-207ENST00000458046 XRN1Q8IZH2 1706 aaKnown RBP14.02□□□□□ -0.16
SYNE2-207ENST00000458046 POM121CA8CG34 1229 aa14.02□□□□□ -0.16
SYNE2-207ENST00000458046 MBD3O95983 291 aa14.02□□□□□ -0.16
SYNE2-207ENST00000458046 MPNDQ8N594 471 aa14.02□□□□□ -0.16
SYNE2-207ENST00000458046 GOLGA6CA6NDK9 693 aa14.02□□□□□ -0.17
SYNE2-207ENST00000458046 GOLGA6BA6NDN3 693 aa14.02□□□□□ -0.17
SYNE2-207ENST00000458046 SGSM2O43147 1006 aa14.02□□□□□ -0.17
SYNE2-207ENST00000458046 GOLGA6DP0CG33 693 aa14.02□□□□□ -0.17
SYNE2-207ENST00000458046 RASEFQ8IZ41 740 aa14.02□□□□□ -0.17
SYNE2-207ENST00000458046 GOLGA6AQ9NYA3 693 aa14.02□□□□□ -0.17
SYNE2-207ENST00000458046 SNX14Q9Y5W7 946 aa14.02□□□□□ -0.17
SYNE2-207ENST00000458046 AOX1Q06278 1338 aa14.02□□□□□ -0.17
SYNE2-207ENST00000458046 BTBD11A6QL63 1104 aa14.01□□□□□ -0.17
SYNE2-207ENST00000458046 CPA1P15085 419 aa14.01□□□□□ -0.17
SYNE2-207ENST00000458046 TEFQ10587 303 aa14.01□□□□□ -0.17
SYNE2-207ENST00000458046 CXorf38Q8TB03 319 aa14.01□□□□□ -0.17
SYNE2-207ENST00000458046 IP6K1Q92551 441 aa14.01□□□□□ -0.17
SYNE2-207ENST00000458046 PRR12Q9ULL5 1215 aa14.01□□□□□ -0.17
SYNE2-207ENST00000458046 PHF8Q9UPP1 1060 aa14.01□□□□□ -0.17
SYNE2-207ENST00000458046 WDR78Q5VTH9 848 aa14.01□□□□□ -0.17
SYNE2-207ENST00000458046 USP48Q86UV5 1035 aa14.01□□□□□ -0.17
SYNE2-207ENST00000458046 CNTROBQ8N137 903 aa14.01□□□□□ -0.17
SYNE2-207ENST00000458046 KCNB2Q92953 911 aa14.01□□□□□ -0.17
SYNE2-207ENST00000458046 PDLIM2Q96JY6 352 aa14.01□□□□□ -0.17
SYNE2-207ENST00000458046 TSPAN18Q96SJ8 248 aa14.01□□□□□ -0.17
SYNE2-207ENST00000458046 FAM208AQ9UK61 1670 aaKnown RBP14□□□□□ -0.17
SYNE2-207ENST00000458046 CCDC189A1A4V9 331 aa14□□□□□ -0.17
SYNE2-207ENST00000458046 RECKO95980 971 aa14□□□□□ -0.17
SYNE2-207ENST00000458046 PDE6BP35913 854 aa14□□□□□ -0.17
SYNE2-207ENST00000458046 IGBP1P78318 339 aa14□□□□□ -0.17
SYNE2-207ENST00000458046 SF3A1Q15459 793 aaKnown RBP14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms