RNA–Protein interactions for RNA: ENST00000455954.2

CHCHD4P3-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 4 pseudogene 3, humanhuman

BASIC

Gene CHCHD4P3, Length 410 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD4P3-201ENST00000455954 KCNQ3O43525 872 aa12.07□□□□□ -0.48
CHCHD4P3-201ENST00000455954 CCT4P50991 539 aaKnown RBP12.07□□□□□ -0.48
CHCHD4P3-201ENST00000455954 TAF7Q15545 349 aaPredicted RBP12.07□□□□□ -0.48
CHCHD4P3-201ENST00000455954 GPR162Q16538 588 aa12.07□□□□□ -0.48
CHCHD4P3-201ENST00000455954 SRCIN1Q9C0H9 1055 aa12.07□□□□□ -0.48
CHCHD4P3-201ENST00000455954 ZBTB1Q9Y2K1 713 aa12.07□□□□□ -0.48
CHCHD4P3-201ENST00000455954 SALL3Q9BXA9 1300 aa12.07□□□□□ -0.48
CHCHD4P3-201ENST00000455954 USP42Q9H9J4 1324 aaKnown RBP12.07□□□□□ -0.48
CHCHD4P3-201ENST00000455954 ZPR1O75312 459 aa12.06□□□□□ -0.48
CHCHD4P3-201ENST00000455954 TPM3P06753 285 aa12.06□□□□□ -0.48
CHCHD4P3-201ENST00000455954 GTF2F1P35269 517 aaKnown RBP eCLIP12.06□□□□□ -0.48
CHCHD4P3-201ENST00000455954 ZGPATQ8N5A5 531 aaKnown RBP12.06□□□□□ -0.48
CHCHD4P3-201ENST00000455954 MYRIPQ8NFW9 859 aa12.06□□□□□ -0.48
CHCHD4P3-201ENST00000455954 TMX3Q96JJ7 454 aa12.06□□□□□ -0.48
CHCHD4P3-201ENST00000455954 SRP68Q9UHB9 627 aaKnown RBP12.06□□□□□ -0.48
CHCHD4P3-201ENST00000455954 WDR33Q9C0J8 1336 aaKnown RBP12.06□□□□□ -0.48
CHCHD4P3-201ENST00000455954 SYCE3A1L190 88 aa12.05□□□□□ -0.48
CHCHD4P3-201ENST00000455954 CHL1O00533 1208 aa12.05□□□□□ -0.48
CHCHD4P3-201ENST00000455954 ESYT1Q9BSJ8 1104 aa12.05□□□□□ -0.48
CHCHD4P3-201ENST00000455954 RBM27Q9P2N5 1060 aaKnown RBP12.05□□□□□ -0.48
CHCHD4P3-201ENST00000455954 NARFQ9UHQ1 456 aa12.05□□□□□ -0.48
CHCHD4P3-201ENST00000455954 PARP3Q9Y6F1 533 aa12.05□□□□□ -0.48
CHCHD4P3-201ENST00000455954 C4AP0C0L4 1744 aa12.05□□□□□ -0.48
CHCHD4P3-201ENST00000455954 COL15A1P39059 1388 aa12.05□□□□□ -0.48
CHCHD4P3-201ENST00000455954 A0A087WZG4 1122 aa12.04□□□□□ -0.48
CHCHD4P3-201ENST00000455954 SNRPA1P09661 255 aaKnown RBP12.04□□□□□ -0.48
CHCHD4P3-201ENST00000455954 PDE1AP54750 535 aa12.04□□□□□ -0.48
CHCHD4P3-201ENST00000455954 EIF5P55010 431 aaKnown RBP12.04□□□□□ -0.48
CHCHD4P3-201ENST00000455954 PKP1Q13835 747 aa12.04□□□□□ -0.48
CHCHD4P3-201ENST00000455954 UTP14CQ5TAP6 766 aaKnown RBP12.04□□□□□ -0.48
CHCHD4P3-201ENST00000455954 USPL1Q5W0Q7 1092 aa12.04□□□□□ -0.48
CHCHD4P3-201ENST00000455954 PIBF1Q8WXW3 757 aa12.04□□□□□ -0.48
CHCHD4P3-201ENST00000455954 STAP2Q9UGK3 403 aa12.04□□□□□ -0.48
CHCHD4P3-201ENST00000455954 YY1P25490 414 aa12.03□□□□□ -0.48
CHCHD4P3-201ENST00000455954 IL6STP40189 918 aaPredicted RBP12.03□□□□□ -0.48
CHCHD4P3-201ENST00000455954 THUMPD2Q9BTF0 503 aaKnown RBP12.03□□□□□ -0.48
CHCHD4P3-201ENST00000455954 CCDC94Q9BW85 323 aaPredicted RBP12.03□□□□□ -0.48
CHCHD4P3-201ENST00000455954 MIS18AQ9NYP9 233 aa12.03□□□□□ -0.48
CHCHD4P3-201ENST00000455954 TCHHQ07283 1943 aa12.03□□□□□ -0.48
CHCHD4P3-201ENST00000455954 GRIN3BO60391 1043 aa12.02□□□□□ -0.49
CHCHD4P3-201ENST00000455954 A1BGP04217 495 aa12.02□□□□□ -0.49
CHCHD4P3-201ENST00000455954 PTMAP06454 111 aaKnown RBP12.02□□□□□ -0.49
CHCHD4P3-201ENST00000455954 PDIA4P13667 645 aaKnown RBP12.02□□□□□ -0.49
CHCHD4P3-201ENST00000455954 TM4SF1P30408 202 aa12.02□□□□□ -0.49
CHCHD4P3-201ENST00000455954 NEK4P51957 841 aa12.02□□□□□ -0.49
CHCHD4P3-201ENST00000455954 CCDC183Q5T5S1 534 aa12.02□□□□□ -0.49
CHCHD4P3-201ENST00000455954 C16orf71Q8IYS4 520 aaPredicted RBP12.02□□□□□ -0.49
CHCHD4P3-201ENST00000455954 SPTLC3Q9NUV7 552 aa12.02□□□□□ -0.49
CHCHD4P3-201ENST00000455954 FAM13BQ9NYF5 915 aa12.02□□□□□ -0.49
CHCHD4P3-201ENST00000455954 USP16Q9Y5T5 823 aa12.02□□□□□ -0.49
CHCHD4P3-201ENST00000455954 RPAP1Q9BWH6 1393 aaPredicted RBP12.02□□□□□ -0.49
CHCHD4P3-201ENST00000455954 PRAMEF22A3QJZ6 481 aa12.01□□□□□ -0.49
CHCHD4P3-201ENST00000455954 GNAI3P08754 354 aa12.01□□□□□ -0.49
CHCHD4P3-201ENST00000455954 TGFB2P61812 414 aa12.01□□□□□ -0.49
CHCHD4P3-201ENST00000455954 PRDM4Q9UKN5 801 aa12.01□□□□□ -0.49
CHCHD4P3-201ENST00000455954 ZNF330Q9Y3S2 320 aaPredicted RBP12.01□□□□□ -0.49
CHCHD4P3-201ENST00000455954 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.01□□□□□ -0.49
CHCHD4P3-201ENST00000455954 ELL2O00472 640 aaPredicted RBP12□□□□□ -0.49
CHCHD4P3-201ENST00000455954 GNAI2P04899 355 aa12□□□□□ -0.49
CHCHD4P3-201ENST00000455954 YBX3P16989 372 aaKnown RBP eCLIP12□□□□□ -0.49
CHCHD4P3-201ENST00000455954 RBM10P98175 930 aaKnown RBP12□□□□□ -0.49
CHCHD4P3-201ENST00000455954 DDR1Q08345 913 aa12□□□□□ -0.49
CHCHD4P3-201ENST00000455954 OTUD7AQ8TE49 926 aaPredicted RBP12□□□□□ -0.49
CHCHD4P3-201ENST00000455954 BCL2L12Q9HB09 334 aa12□□□□□ -0.49
CHCHD4P3-201ENST00000455954 ATP6V1DQ9Y5K8 247 aa12□□□□□ -0.49
CHCHD4P3-201ENST00000455954 C10orf71Q711Q0 1435 aa12□□□□□ -0.49
CHCHD4P3-201ENST00000455954 POLRMTO00411 1230 aaKnown RBP11.99□□□□□ -0.49
CHCHD4P3-201ENST00000455954 CHMLP26374 656 aa11.99□□□□□ -0.49
CHCHD4P3-201ENST00000455954 EIF4A1P60842 406 aaKnown RBP11.99□□□□□ -0.49
CHCHD4P3-201ENST00000455954 NFIXQ14938 502 aa11.99□□□□□ -0.49
CHCHD4P3-201ENST00000455954 MEIS3Q99687 375 aa11.99□□□□□ -0.49
CHCHD4P3-201ENST00000455954 LRRCC1Q9C099 1032 aa11.99□□□□□ -0.49
CHCHD4P3-201ENST00000455954 BABAM1Q9NWV8 329 aa11.99□□□□□ -0.49
CHCHD4P3-201ENST00000455954 TBC1D2BQ9UPU7 963 aa11.99□□□□□ -0.49
CHCHD4P3-201ENST00000455954 SMARCA5O60264 1052 aaPredicted RBP11.98□□□□□ -0.49
CHCHD4P3-201ENST00000455954 GIGYF1O75420 1035 aaPredicted RBP11.98□□□□□ -0.49
CHCHD4P3-201ENST00000455954 MX1P20591 662 aa11.98□□□□□ -0.49
CHCHD4P3-201ENST00000455954 UBE2HP62256 183 aa11.98□□□□□ -0.49
CHCHD4P3-201ENST00000455954 FKBP5Q13451 457 aaPredicted RBP11.98□□□□□ -0.49
CHCHD4P3-201ENST00000455954 USP25Q9UHP3 1055 aa11.98□□□□□ -0.49
CHCHD4P3-201ENST00000455954 TSPYL4Q9UJ04 414 aa11.98□□□□□ -0.49
CHCHD4P3-201ENST00000455954 NSFL1CQ9UNZ2 370 aaKnown RBP11.98□□□□□ -0.49
CHCHD4P3-201ENST00000455954 KIF13BQ9NQT8 1826 aa11.97□□□□□ -0.49
CHCHD4P3-201ENST00000455954 KDM3BQ7LBC6 1761 aa11.97□□□□□ -0.49
CHCHD4P3-201ENST00000455954 A0A0G2JLW4 131 aa11.97□□□□□ -0.49
CHCHD4P3-201ENST00000455954 NBPF26B4DH59 902 aa11.97□□□□□ -0.49
CHCHD4P3-201ENST00000455954 SERPINB2P05120 415 aa11.97□□□□□ -0.49
CHCHD4P3-201ENST00000455954 DPEP1P16444 411 aa11.97□□□□□ -0.49
CHCHD4P3-201ENST00000455954 HSPA4P34932 840 aa11.97□□□□□ -0.49
CHCHD4P3-201ENST00000455954 PIP4K2AP48426 406 aaPredicted RBP11.97□□□□□ -0.49
CHCHD4P3-201ENST00000455954 NBPF10Q6P3W6 841 aaKnown RBP11.97□□□□□ -0.49
CHCHD4P3-201ENST00000455954 DZIP3Q86Y13 1208 aaKnown RBP11.97□□□□□ -0.49
CHCHD4P3-201ENST00000455954 NBPF15Q8N660 670 aa11.97□□□□□ -0.49
CHCHD4P3-201ENST00000455954 DIAPH3Q9NSV4 1193 aa11.97□□□□□ -0.49
CHCHD4P3-201ENST00000455954 GOLGA6L6A8MZA4 724 aa11.96□□□□□ -0.49
CHCHD4P3-201ENST00000455954 RAB11FIP3O75154 756 aa11.96□□□□□ -0.49
CHCHD4P3-201ENST00000455954 CAMTA2O94983 1202 aa11.96□□□□□ -0.49
CHCHD4P3-201ENST00000455954 ATP8B2P98198 1209 aa11.96□□□□□ -0.49
CHCHD4P3-201ENST00000455954 NOLC1Q14978 699 aaKnown RBP eCLIP11.96□□□□□ -0.49
CHCHD4P3-201ENST00000455954 SYCP1Q15431 976 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms