RNA–Protein interactions for RNA: ENST00000455953.1

NCBP2-208, Transcript of nuclear cap binding protein subunit 2, humanhuman

TSL 5

Gene NCBP2, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP2-208ENST00000455953 SPIRE2Q8WWL2 714 aa9.59□□□□□ -0.87
NCBP2-208ENST00000455953 PIGBQ92521 554 aa9.59□□□□□ -0.87
NCBP2-208ENST00000455953 RTCBQ9Y3I0 505 aaKnown RBP9.59□□□□□ -0.87
NCBP2-208ENST00000455953 SALL2Q9Y467 1007 aaPredicted RBP9.59□□□□□ -0.87
NCBP2-208ENST00000455953 IGSF1Q8N6C5 1336 aa9.58□□□□□ -0.88
NCBP2-208ENST00000455953 RFC4P35249 363 aa9.58□□□□□ -0.88
NCBP2-208ENST00000455953 CC2D1BQ5T0F9 858 aaKnown RBP9.58□□□□□ -0.88
NCBP2-208ENST00000455953 TRAPPC3LQ5T215 181 aa9.58□□□□□ -0.88
NCBP2-208ENST00000455953 SULT6B1Q6IMI4 303 aa9.58□□□□□ -0.88
NCBP2-208ENST00000455953 COL23A1Q86Y22 540 aaPredicted RBP9.58□□□□□ -0.88
NCBP2-208ENST00000455953 NUTM1Q86Y26 1132 aa9.58□□□□□ -0.88
NCBP2-208ENST00000455953 ANKLE1Q8NAG6 615 aa9.58□□□□□ -0.88
NCBP2-208ENST00000455953 SYMPKQ92797 1274 aaKnown RBP9.58□□□□□ -0.88
NCBP2-208ENST00000455953 CFAP53Q96M91 514 aa9.58□□□□□ -0.88
NCBP2-208ENST00000455953 BEGAINQ9BUH8 593 aa9.58□□□□□ -0.88
NCBP2-208ENST00000455953 NCAPD2Q15021 1401 aa9.57□□□□□ -0.88
NCBP2-208ENST00000455953 NEFMP07197 916 aa9.57□□□□□ -0.88
NCBP2-208ENST00000455953 NDUFV2P19404 249 aa9.57□□□□□ -0.88
NCBP2-208ENST00000455953 PCDHGC3Q9UN70 934 aa9.57□□□□□ -0.88
NCBP2-208ENST00000455953 CD2APQ9Y5K6 639 aa9.57□□□□□ -0.88
NCBP2-208ENST00000455953 V9GY48 417 aaPredicted RBP9.57□□□□□ -0.88
NCBP2-208ENST00000455953 ZNF831Q5JPB2 1677 aa9.57□□□□□ -0.88
NCBP2-208ENST00000455953 DIAPH1O60610 1272 aaKnown RBP9.56□□□□□ -0.88
NCBP2-208ENST00000455953 LIAT1Q6ZQX7 453 aa9.56□□□□□ -0.88
NCBP2-208ENST00000455953 IRX2Q9BZI1 471 aaPredicted RBP9.56□□□□□ -0.88
NCBP2-208ENST00000455953 COL5A3P25940 1745 aaPredicted RBP9.56□□□□□ -0.88
NCBP2-208ENST00000455953 KIF7Q2M1P5 1343 aa9.56□□□□□ -0.88
NCBP2-208ENST00000455953 MOXD2PA6NHM9 499 aa9.55□□□□□ -0.88
NCBP2-208ENST00000455953 U2SURPO15042 1029 aaKnown RBP9.55□□□□□ -0.88
NCBP2-208ENST00000455953 TTC5Q8N0Z6 440 aa9.55□□□□□ -0.88
NCBP2-208ENST00000455953 NLGN1Q8N2Q7 840 aa9.55□□□□□ -0.88
NCBP2-208ENST00000455953 ASAP1Q9ULH1 1129 aa9.55□□□□□ -0.88
NCBP2-208ENST00000455953 PARP3Q9Y6F1 533 aa9.55□□□□□ -0.88
NCBP2-208ENST00000455953 PTCD1O75127 700 aaKnown RBP9.54□□□□□ -0.88
NCBP2-208ENST00000455953 GIGYF1O75420 1035 aaPredicted RBP9.54□□□□□ -0.88
NCBP2-208ENST00000455953 SLC19A1P41440 591 aa9.54□□□□□ -0.88
NCBP2-208ENST00000455953 Q3C1V9 767 aa9.54□□□□□ -0.88
NCBP2-208ENST00000455953 AKAP4Q5JQC9 854 aa9.54□□□□□ -0.88
NCBP2-208ENST00000455953 CCDC87Q9NVE4 849 aa9.54□□□□□ -0.88
NCBP2-208ENST00000455953 NUDCQ9Y266 331 aa9.54□□□□□ -0.88
NCBP2-208ENST00000455953 FDX1P10109 184 aa9.53□□□□□ -0.88
NCBP2-208ENST00000455953 MSS51Q4VC12 460 aa9.53□□□□□ -0.88
NCBP2-208ENST00000455953 ZNF784Q8NCA9 323 aaPredicted RBP9.53□□□□□ -0.88
NCBP2-208ENST00000455953 LINC00116Q8NCU8 138 aa9.53□□□□□ -0.88
NCBP2-208ENST00000455953 NLGN2Q8NFZ4 835 aa9.53□□□□□ -0.88
NCBP2-208ENST00000455953 USB1Q9BQ65 265 aaKnown RBP9.53□□□□□ -0.88
NCBP2-208ENST00000455953 TBC1D2Q9BYX2 928 aa9.53□□□□□ -0.88
NCBP2-208ENST00000455953 ATG3Q9NT62 314 aa9.53□□□□□ -0.88
NCBP2-208ENST00000455953 FCF1Q9Y324 198 aaKnown RBP9.53□□□□□ -0.88
NCBP2-208ENST00000455953 C4AP0C0L4 1744 aa9.53□□□□□ -0.88
NCBP2-208ENST00000455953 NPHP1O15259 732 aa9.52□□□□□ -0.89
NCBP2-208ENST00000455953 HMOX1P09601 288 aa9.52□□□□□ -0.89
NCBP2-208ENST00000455953 TEFQ10587 303 aa9.52□□□□□ -0.89
NCBP2-208ENST00000455953 NFATC2IPQ8NCF5 419 aa9.52□□□□□ -0.89
NCBP2-208ENST00000455953 N4BP2Q86UW6 1770 aaPredicted RBP9.52□□□□□ -0.89
NCBP2-208ENST00000455953 CNTNAP4Q9C0A0 1308 aa9.52□□□□□ -0.89
NCBP2-208ENST00000455953 MMP10P09238 476 aa9.51□□□□□ -0.89
NCBP2-208ENST00000455953 IL13P35225 146 aa9.51□□□□□ -0.89
NCBP2-208ENST00000455953 RC3H1Q5TC82 1133 aaKnown RBP9.51□□□□□ -0.89
NCBP2-208ENST00000455953 SPRYD7Q5W111 196 aa9.51□□□□□ -0.89
NCBP2-208ENST00000455953 AEBP1Q8IUX7 1158 aa9.51□□□□□ -0.89
NCBP2-208ENST00000455953 GAS2L2Q8NHY3 880 aa9.51□□□□□ -0.89
NCBP2-208ENST00000455953 CICQ96RK0 1608 aaPredicted RBP9.51□□□□□ -0.89
NCBP2-208ENST00000455953 KDRP35968 1356 aa9.5□□□□□ -0.89
NCBP2-208ENST00000455953 RPS6KA4O75676 772 aa9.5□□□□□ -0.89
NCBP2-208ENST00000455953 RTF1Q92541 710 aaKnown RBP9.5□□□□□ -0.89
NCBP2-208ENST00000455953 GPBP1L1Q9HC44 474 aaPredicted RBP9.5□□□□□ -0.89
NCBP2-208ENST00000455953 KIF13BQ9NQT8 1826 aa9.49□□□□□ -0.89
NCBP2-208ENST00000455953 KDM6AO15550 1401 aaPredicted RBP9.49□□□□□ -0.89
NCBP2-208ENST00000455953 TJP1Q07157 1748 aa9.49□□□□□ -0.89
NCBP2-208ENST00000455953 SENP3-EIF4A1A0A087X0R7 540 aa9.49□□□□□ -0.89
NCBP2-208ENST00000455953 STARD3NLO95772 234 aa9.49□□□□□ -0.89
NCBP2-208ENST00000455953 CRKLP46109 303 aaKnown RBP9.49□□□□□ -0.89
NCBP2-208ENST00000455953 MMP16P51512 607 aa9.49□□□□□ -0.89
NCBP2-208ENST00000455953 ITPK1Q13572 414 aa9.49□□□□□ -0.89
NCBP2-208ENST00000455953 TRIM67Q6ZTA4 783 aa9.49□□□□□ -0.89
NCBP2-208ENST00000455953 SLC52A2Q9HAB3 445 aa9.49□□□□□ -0.89
NCBP2-208ENST00000455953 MYH14Q7Z406 1995 aaKnown RBP9.49□□□□□ -0.89
NCBP2-208ENST00000455953 GNAT3A8MTJ3 354 aa9.48□□□□□ -0.89
NCBP2-208ENST00000455953 GFRA3O60609 400 aa9.48□□□□□ -0.89
NCBP2-208ENST00000455953 DXOO77932 396 aaKnown RBP9.48□□□□□ -0.89
NCBP2-208ENST00000455953 TGFB2P61812 414 aa9.48□□□□□ -0.89
NCBP2-208ENST00000455953 WWC3Q9ULE0 1092 aa9.48□□□□□ -0.89
NCBP2-208ENST00000455953 ZNF330Q9Y3S2 320 aaPredicted RBP9.48□□□□□ -0.89
NCBP2-208ENST00000455953 PCDHB15Q9Y5E8 787 aa9.48□□□□□ -0.89
NCBP2-208ENST00000455953 NPC1L1Q9UHC9 1359 aa9.48□□□□□ -0.89
NCBP2-208ENST00000455953 ARFGEF1Q9Y6D6 1849 aa9.47□□□□□ -0.89
NCBP2-208ENST00000455953 A0A087WZG4 1122 aa9.47□□□□□ -0.89
NCBP2-208ENST00000455953 C6orf229H3BNL8 230 aa9.47□□□□□ -0.89
NCBP2-208ENST00000455953 YBX3P16989 372 aaKnown RBP eCLIP9.47□□□□□ -0.89
NCBP2-208ENST00000455953 TEX13AQ9BXU3 409 aaPredicted RBP9.47□□□□□ -0.89
NCBP2-208ENST00000455953 PNNQ9H307 717 aaKnown RBP9.47□□□□□ -0.89
NCBP2-208ENST00000455953 BCS1LQ9Y276 419 aa9.47□□□□□ -0.89
NCBP2-208ENST00000455953 RNMTO43148 476 aaKnown RBP9.46□□□□□ -0.9
NCBP2-208ENST00000455953 U2AF1L5P0DN76 240 aaPredicted RBP9.46□□□□□ -0.9
NCBP2-208ENST00000455953 C1QTNF8P60827 252 aa9.46□□□□□ -0.9
NCBP2-208ENST00000455953 U2AF1Q01081 240 aaKnown RBP eCLIP9.46□□□□□ -0.9
NCBP2-208ENST00000455953 MTHFSDQ2M296 383 aaKnown RBP9.46□□□□□ -0.9
NCBP2-208ENST00000455953 RSBN1LQ6PCB5 846 aaPredicted RBP9.46□□□□□ -0.9
NCBP2-208ENST00000455953 ARHGAP27Q6ZUM4 889 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms