RNA–Protein interactions for RNA: ENST00000455362.1

HMGB1P4-201, Transcript of high mobility group box 1 pseudogene 4, humanhuman

BASIC

Gene HMGB1P4, Length 567 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P4-201ENST00000455362 PCDHB9Q9Y5E1 797 aa6.84□□□□□ -1.31
HMGB1P4-201ENST00000455362 STRCP1A6NGW2 1772 aa6.84□□□□□ -1.31
HMGB1P4-201ENST00000455362 PARD3Q8TEW0 1356 aa6.83□□□□□ -1.32
HMGB1P4-201ENST00000455362 NWD1Q149M9 1564 aa6.83□□□□□ -1.32
HMGB1P4-201ENST00000455362 RGPD8O14715 1765 aaPredicted RBP6.83□□□□□ -1.32
HMGB1P4-201ENST00000455362 P4HBP07237 508 aaKnown RBP6.83□□□□□ -1.32
HMGB1P4-201ENST00000455362 PPP4CP60510 307 aa6.83□□□□□ -1.32
HMGB1P4-201ENST00000455362 CCDC144BQ3MJ40 725 aa6.83□□□□□ -1.32
HMGB1P4-201ENST00000455362 CCDC184Q52MB2 194 aa6.83□□□□□ -1.32
HMGB1P4-201ENST00000455362 BLOC1S3Q6QNY0 202 aa6.83□□□□□ -1.32
HMGB1P4-201ENST00000455362 HDGFL2Q7Z4V5 671 aaPredicted RBP6.83□□□□□ -1.32
HMGB1P4-201ENST00000455362 SLC43A3Q8NBI5 491 aa6.83□□□□□ -1.32
HMGB1P4-201ENST00000455362 ANKK1Q8NFD2 765 aa6.83□□□□□ -1.32
HMGB1P4-201ENST00000455362 RNF34Q969K3 372 aa6.83□□□□□ -1.32
HMGB1P4-201ENST00000455362 TINF2Q9BSI4 451 aa6.83□□□□□ -1.32
HMGB1P4-201ENST00000455362 MKNK1Q9BUB5 465 aa6.83□□□□□ -1.32
HMGB1P4-201ENST00000455362 WBP1LQ9NX94 342 aa6.83□□□□□ -1.32
HMGB1P4-201ENST00000455362 MAP10Q9P2G4 905 aa6.83□□□□□ -1.32
HMGB1P4-201ENST00000455362 IQSEC3Q9UPP2 1182 aaPredicted RBP6.83□□□□□ -1.32
HMGB1P4-201ENST00000455362 DNMT3AQ9Y6K1 912 aaPredicted RBP6.83□□□□□ -1.32
HMGB1P4-201ENST00000455362 CD163L1Q9NR16 1453 aa6.83□□□□□ -1.32
HMGB1P4-201ENST00000455362 PPIP5K1Q6PFW1 1433 aa6.83□□□□□ -1.32
HMGB1P4-201ENST00000455362 NSD3Q9BZ95 1437 aa6.83□□□□□ -1.32
HMGB1P4-201ENST00000455362 A0A1W2PP64 1363 aa6.82□□□□□ -1.32
HMGB1P4-201ENST00000455362 CGNL1Q0VF96 1302 aa6.82□□□□□ -1.32
HMGB1P4-201ENST00000455362 MYBBP1AQ9BQG0 1328 aaKnown RBP6.82□□□□□ -1.32
HMGB1P4-201ENST00000455362 ATP7BP35670 1465 aa6.82□□□□□ -1.32
HMGB1P4-201ENST00000455362 GOLGA8CPA6NN73 597 aa6.82□□□□□ -1.32
HMGB1P4-201ENST00000455362 CCNYL3P0C7X3 344 aa6.82□□□□□ -1.32
HMGB1P4-201ENST00000455362 ARHGAP4P98171 946 aa6.82□□□□□ -1.32
HMGB1P4-201ENST00000455362 SIX5Q8N196 739 aa6.82□□□□□ -1.32
HMGB1P4-201ENST00000455362 MICAL1Q8TDZ2 1067 aa6.82□□□□□ -1.32
HMGB1P4-201ENST00000455362 TGIF2Q9GZN2 237 aa6.82□□□□□ -1.32
HMGB1P4-201ENST00000455362 C19orf44Q9H6X5 657 aa6.82□□□□□ -1.32
HMGB1P4-201ENST00000455362 HCSTQ9UBK5 93 aa6.82□□□□□ -1.32
HMGB1P4-201ENST00000455362 SEPT3Q9UH03 358 aa6.82□□□□□ -1.32
HMGB1P4-201ENST00000455362 PCDHB3Q9Y5E6 796 aa6.82□□□□□ -1.32
HMGB1P4-201ENST00000455362 USP32Q8NFA0 1604 aa6.82□□□□□ -1.32
HMGB1P4-201ENST00000455362 CPSF1Q10570 1443 aaKnown RBP6.82□□□□□ -1.32
HMGB1P4-201ENST00000455362 ADGRL3Q9HAR2 1447 aa6.82□□□□□ -1.32
HMGB1P4-201ENST00000455362 NALCNQ8IZF0 1738 aa6.81□□□□□ -1.32
HMGB1P4-201ENST00000455362 FMN2Q9NZ56 1722 aa6.81□□□□□ -1.32
HMGB1P4-201ENST00000455362 NKTRP30414 1462 aaKnown RBP6.81□□□□□ -1.32
HMGB1P4-201ENST00000455362 FYB1O15117 783 aa6.81□□□□□ -1.32
HMGB1P4-201ENST00000455362 PTPN5P54829 565 aa6.81□□□□□ -1.32
HMGB1P4-201ENST00000455362 MTMR3Q13615 1198 aa6.81□□□□□ -1.32
HMGB1P4-201ENST00000455362 SCUBE3Q8IX30 993 aa6.81□□□□□ -1.32
HMGB1P4-201ENST00000455362 PHTF2Q8N3S3 785 aa6.81□□□□□ -1.32
HMGB1P4-201ENST00000455362 PMFBP1Q8TBY8 1022 aa6.81□□□□□ -1.32
HMGB1P4-201ENST00000455362 ARMC5Q96C12 935 aa6.81□□□□□ -1.32
HMGB1P4-201ENST00000455362 HINFPQ9BQA5 517 aa6.81□□□□□ -1.32
HMGB1P4-201ENST00000455362 ARHGAP9Q9BRR9 750 aa6.81□□□□□ -1.32
HMGB1P4-201ENST00000455362 TSR3Q9UJK0 312 aaKnown RBP6.81□□□□□ -1.32
HMGB1P4-201ENST00000455362 ANKARQ7Z5J8 1434 aa6.81□□□□□ -1.32
HMGB1P4-201ENST00000455362 NCOA3Q9Y6Q9 1424 aa6.81□□□□□ -1.32
HMGB1P4-201ENST00000455362 TOPAZ1Q8N9V7 1692 aa6.81□□□□□ -1.32
HMGB1P4-201ENST00000455362 ACEP12821 1306 aa6.8□□□□□ -1.32
HMGB1P4-201ENST00000455362 AKAP12Q02952 1782 aa6.8□□□□□ -1.32
HMGB1P4-201ENST00000455362 PTCD1O75127 700 aaKnown RBP6.8□□□□□ -1.32
HMGB1P4-201ENST00000455362 PPP2R1AP30153 589 aa6.8□□□□□ -1.32
HMGB1P4-201ENST00000455362 PSME1Q06323 249 aa6.8□□□□□ -1.32
HMGB1P4-201ENST00000455362 ECM1Q16610 540 aa6.8□□□□□ -1.32
HMGB1P4-201ENST00000455362 CCDC102BQ68D86 513 aa6.8□□□□□ -1.32
HMGB1P4-201ENST00000455362 CDC42BPGQ6DT37 1551 aa6.8□□□□□ -1.32
HMGB1P4-201ENST00000455362 SDE2Q6IQ49 451 aa6.8□□□□□ -1.32
HMGB1P4-201ENST00000455362 ZBTB33Q86T24 672 aa6.8□□□□□ -1.32
HMGB1P4-201ENST00000455362 MORC1Q86VD1 984 aa6.8□□□□□ -1.32
HMGB1P4-201ENST00000455362 NLRP13Q86W25 1043 aa6.8□□□□□ -1.32
HMGB1P4-201ENST00000455362 METTL16Q86W50 562 aaKnown RBP6.8□□□□□ -1.32
HMGB1P4-201ENST00000455362 NUDT12Q9BQG2 462 aa6.8□□□□□ -1.32
HMGB1P4-201ENST00000455362 METTL5Q9NRN9 209 aaKnown RBP6.8□□□□□ -1.32
HMGB1P4-201ENST00000455362 EVA1BQ9NVM1 165 aa6.8□□□□□ -1.32
HMGB1P4-201ENST00000455362 VTI1BQ9UEU0 232 aa6.8□□□□□ -1.32
HMGB1P4-201ENST00000455362 BRD4O60885 1362 aaPredicted RBP6.8□□□□□ -1.32
HMGB1P4-201ENST00000455362 NSD2O96028 1365 aa6.8□□□□□ -1.32
HMGB1P4-201ENST00000455362 TMEM94Q12767 1356 aa6.8□□□□□ -1.32
HMGB1P4-201ENST00000455362 ZNF335Q9H4Z2 1342 aaPredicted RBP6.79□□□□□ -1.32
HMGB1P4-201ENST00000455362 ITSN1Q15811 1721 aa6.79□□□□□ -1.32
HMGB1P4-201ENST00000455362 EDC4Q6P2E9 1401 aaKnown RBP6.79□□□□□ -1.32
HMGB1P4-201ENST00000455362 XIRP1Q702N8 1843 aaKnown RBP6.79□□□□□ -1.32
HMGB1P4-201ENST00000455362 SFI1A8K8P3 1242 aa6.79□□□□□ -1.32
HMGB1P4-201ENST00000455362 NDUFB5O43674 189 aa6.79□□□□□ -1.32
HMGB1P4-201ENST00000455362 SORBS3O60504 671 aa6.79□□□□□ -1.32
HMGB1P4-201ENST00000455362 RAB11FIP3O75154 756 aa6.79□□□□□ -1.32
HMGB1P4-201ENST00000455362 DNAJA1P31689 397 aaKnown RBP6.79□□□□□ -1.32
HMGB1P4-201ENST00000455362 GTF2IP78347 998 aa6.79□□□□□ -1.32
HMGB1P4-201ENST00000455362 TMC7Q7Z402 723 aa6.79□□□□□ -1.32
HMGB1P4-201ENST00000455362 DZIP3Q86Y13 1208 aaKnown RBP6.79□□□□□ -1.32
HMGB1P4-201ENST00000455362 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.79□□□□□ -1.32
HMGB1P4-201ENST00000455362 NGDNQ8NEJ9 315 aaKnown RBP6.79□□□□□ -1.32
HMGB1P4-201ENST00000455362 PNISRQ8TF01 805 aaKnown RBP6.79□□□□□ -1.32
HMGB1P4-201ENST00000455362 FAM161BQ96MY7 647 aa6.79□□□□□ -1.32
HMGB1P4-201ENST00000455362 RBCK1Q9BYM8 510 aa6.79□□□□□ -1.32
HMGB1P4-201ENST00000455362 PARP2Q9UGN5 583 aa6.79□□□□□ -1.32
HMGB1P4-201ENST00000455362 DOLKQ9UPQ8 538 aa6.79□□□□□ -1.32
HMGB1P4-201ENST00000455362 KIAA1024Q9UPX6 916 aa6.79□□□□□ -1.32
HMGB1P4-201ENST00000455362 HPS5Q9UPZ3 1129 aa6.79□□□□□ -1.32
HMGB1P4-201ENST00000455362 POLR3AO14802 1390 aaPredicted RBP6.79□□□□□ -1.32
HMGB1P4-201ENST00000455362 MON2Q7Z3U7 1717 aa6.79□□□□□ -1.32
HMGB1P4-201ENST00000455362 hCG_2014768A0A024R1R8 64 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms