RNA–Protein interactions for RNA: ENST00000454822.5

RPE-216, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 2 BASIC

Gene RPE, Length 2,130 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-216ENST00000454822 DZIP3Q86Y13 1208 aaKnown RBP10.67□□□□□ -0.7
RPE-216ENST00000454822 CCDC171Q6TFL3 1326 aa10.67□□□□□ -0.7
RPE-216ENST00000454822 CDHR2Q9BYE9 1310 aa10.67□□□□□ -0.7
RPE-216ENST00000454822 LOC102724428A0A0B4J2F2 783 aa10.67□□□□□ -0.7
RPE-216ENST00000454822 A0A0D9SFI3 127 aa10.67□□□□□ -0.7
RPE-216ENST00000454822 ATP6V1AP38606 617 aa10.67□□□□□ -0.7
RPE-216ENST00000454822 EIF5P55010 431 aaKnown RBP10.67□□□□□ -0.7
RPE-216ENST00000454822 SIK1P57059 783 aa10.67□□□□□ -0.7
RPE-216ENST00000454822 NUCB2P80303 420 aa10.67□□□□□ -0.7
RPE-216ENST00000454822 CUL4AQ13619 759 aa10.67□□□□□ -0.7
RPE-216ENST00000454822 PRPF40BQ6NWY9 871 aaKnown RBP10.67□□□□□ -0.7
RPE-216ENST00000454822 KCNB2Q92953 911 aa10.67□□□□□ -0.7
RPE-216ENST00000454822 GBP4Q96PP9 640 aa10.67□□□□□ -0.7
RPE-216ENST00000454822 CCDC85AQ96PX6 553 aaPredicted RBP10.67□□□□□ -0.7
RPE-216ENST00000454822 NDUFB9Q9Y6M9 179 aa10.67□□□□□ -0.7
RPE-216ENST00000454822 DDX11L8A8MPP1 907 aa10.66□□□□□ -0.7
RPE-216ENST00000454822 IFIT5Q13325 482 aaKnown RBP10.66□□□□□ -0.7
RPE-216ENST00000454822 NECTIN1Q15223 517 aa10.66□□□□□ -0.7
RPE-216ENST00000454822 MAP4K1Q92918 833 aa10.66□□□□□ -0.7
RPE-216ENST00000454822 NGLY1Q96IV0 654 aa10.66□□□□□ -0.7
RPE-216ENST00000454822 DNAJC2Q99543 621 aaKnown RBP10.66□□□□□ -0.7
RPE-216ENST00000454822 CCDC87Q9NVE4 849 aa10.66□□□□□ -0.7
RPE-216ENST00000454822 CEP126Q9P2H0 1117 aa10.66□□□□□ -0.7
RPE-216ENST00000454822 FBXO3Q9UK99 471 aa10.66□□□□□ -0.7
RPE-216ENST00000454822 FAM98CQ17RN3 349 aaKnown RBP10.66□□□□□ -0.7
RPE-216ENST00000454822 NOL8Q76FK4 1167 aaKnown RBP10.66□□□□□ -0.7
RPE-216ENST00000454822 ZNF34Q8IZ26 560 aa10.66□□□□□ -0.7
RPE-216ENST00000454822 C8orf37Q96NL8 207 aa10.66□□□□□ -0.7
RPE-216ENST00000454822 TRMT112Q9UI30 125 aaKnown RBP10.66□□□□□ -0.7
RPE-216ENST00000454822 RBM8AQ9Y5S9 174 aaKnown RBP10.66□□□□□ -0.7
RPE-216ENST00000454822 A0A1B0GUL7 405 aa10.65□□□□□ -0.7
RPE-216ENST00000454822 IRS4O14654 1257 aaPredicted RBP10.65□□□□□ -0.7
RPE-216ENST00000454822 KCNQ2O43526 872 aa10.65□□□□□ -0.7
RPE-216ENST00000454822 TRAK2O60296 914 aa10.65□□□□□ -0.7
RPE-216ENST00000454822 CYP2E1P05181 493 aaPredicted RBP10.65□□□□□ -0.7
RPE-216ENST00000454822 CRKLP46109 303 aaKnown RBP10.65□□□□□ -0.7
RPE-216ENST00000454822 ITPK1Q13572 414 aa10.65□□□□□ -0.7
RPE-216ENST00000454822 VPS72Q15906 364 aa10.65□□□□□ -0.7
RPE-216ENST00000454822 TAF7LQ5H9L4 462 aa10.65□□□□□ -0.7
RPE-216ENST00000454822 CLEC17AQ6ZS10 378 aa10.65□□□□□ -0.7
RPE-216ENST00000454822 TTLL11Q8NHH1 800 aa10.65□□□□□ -0.7
RPE-216ENST00000454822 TTC14Q96N46 770 aa10.65□□□□□ -0.7
RPE-216ENST00000454822 NUP98P52948 1817 aa10.65□□□□□ -0.71
RPE-216ENST00000454822 PKP1Q13835 747 aa10.64□□□□□ -0.71
RPE-216ENST00000454822 CREB3L3Q68CJ9 461 aa10.64□□□□□ -0.71
RPE-216ENST00000454822 DDX46Q7L014 1031 aaKnown RBP10.64□□□□□ -0.71
RPE-216ENST00000454822 ZNF589Q86UQ0 364 aaPredicted RBP10.64□□□□□ -0.71
RPE-216ENST00000454822 INTS4Q96HW7 963 aaKnown RBP10.64□□□□□ -0.71
RPE-216ENST00000454822 MED23Q9ULK4 1368 aa10.64□□□□□ -0.71
RPE-216ENST00000454822 ZNF609O15014 1411 aa10.64□□□□□ -0.71
RPE-216ENST00000454822 CASTP20810 708 aaKnown RBP10.64□□□□□ -0.71
RPE-216ENST00000454822 KCNJ4P48050 445 aa10.64□□□□□ -0.71
RPE-216ENST00000454822 CTSWP56202 376 aa10.64□□□□□ -0.71
RPE-216ENST00000454822 ADCK5Q3MIX3 580 aa10.64□□□□□ -0.71
RPE-216ENST00000454822 KBTBD3Q8NAB2 608 aa10.64□□□□□ -0.71
RPE-216ENST00000454822 SMARCC1Q92922 1105 aaPredicted RBP10.64□□□□□ -0.71
RPE-216ENST00000454822 TM6SF1Q9BZW5 370 aa10.64□□□□□ -0.71
RPE-216ENST00000454822 GREM2Q9H772 168 aa10.64□□□□□ -0.71
RPE-216ENST00000454822 AKAP2Q9Y2D5 859 aa10.64□□□□□ -0.71
RPE-216ENST00000454822 RFX7Q2KHR2 1363 aa10.64□□□□□ -0.71
RPE-216ENST00000454822 PALLDQ8WX93 1383 aa10.64□□□□□ -0.71
RPE-216ENST00000454822 JCADQ9P266 1359 aa10.64□□□□□ -0.71
RPE-216ENST00000454822 BCL9LQ86UU0 1499 aa10.64□□□□□ -0.71
RPE-216ENST00000454822 UBN2Q6ZU65 1347 aa10.63□□□□□ -0.71
RPE-216ENST00000454822 SLC27A2O14975 620 aa10.63□□□□□ -0.71
RPE-216ENST00000454822 PDE8AO60658 829 aa10.63□□□□□ -0.71
RPE-216ENST00000454822 TAF5LO75529 589 aa10.63□□□□□ -0.71
RPE-216ENST00000454822 BAG4O95429 457 aaKnown RBP10.63□□□□□ -0.71
RPE-216ENST00000454822 CHGBP05060 677 aa10.63□□□□□ -0.71
RPE-216ENST00000454822 CPA1P15085 419 aa10.63□□□□□ -0.71
RPE-216ENST00000454822 ZKSCAN1P17029 563 aaPredicted RBP10.63□□□□□ -0.71
RPE-216ENST00000454822 ITGA6P23229 1130 aa10.63□□□□□ -0.71
RPE-216ENST00000454822 AK2P54819 239 aa10.63□□□□□ -0.71
RPE-216ENST00000454822 JAKMIP1Q96N16 626 aaKnown RBP10.63□□□□□ -0.71
RPE-216ENST00000454822 ZSWIM6Q9HCJ5 1215 aa10.63□□□□□ -0.71
RPE-216ENST00000454822 PAG1Q9NWQ8 432 aa10.63□□□□□ -0.71
RPE-216ENST00000454822 ZDHHC9Q9Y397 364 aa10.63□□□□□ -0.71
RPE-216ENST00000454822 RIPOR2Q9Y4F9 1068 aa10.63□□□□□ -0.71
RPE-216ENST00000454822 ANKRD36CQ5JPF3 1778 aa10.63□□□□□ -0.71
RPE-216ENST00000454822 ANKRD18BA2A2Z9 1011 aa10.63□□□□□ -0.71
RPE-216ENST00000454822 GOLIM4O00461 696 aa10.63□□□□□ -0.71
RPE-216ENST00000454822 IFIT1P09914 478 aaKnown RBP10.63□□□□□ -0.71
RPE-216ENST00000454822 FNBP4Q8N3X1 1017 aaPredicted RBP10.63□□□□□ -0.71
RPE-216ENST00000454822 CAMTA2O94983 1202 aa10.62□□□□□ -0.71
RPE-216ENST00000454822 ADORA1P30542 326 aa10.62□□□□□ -0.71
RPE-216ENST00000454822 MCMDC2Q4G0Z9 681 aa10.62□□□□□ -0.71
RPE-216ENST00000454822 SUSD4Q5VX71 490 aa10.62□□□□□ -0.71
RPE-216ENST00000454822 LDHAL6AQ6ZMR3 332 aa10.62□□□□□ -0.71
RPE-216ENST00000454822 RUFY3Q7L099 469 aa10.62□□□□□ -0.71
RPE-216ENST00000454822 TICAM2Q86XR7 235 aa10.62□□□□□ -0.71
RPE-216ENST00000454822 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.62□□□□□ -0.71
RPE-216ENST00000454822 XAGE2Q96GT9 111 aa10.62□□□□□ -0.71
RPE-216ENST00000454822 PDRG1Q9NUG6 133 aa10.62□□□□□ -0.71
RPE-216ENST00000454822 LIMCH1Q9UPQ0 1083 aa10.62□□□□□ -0.71
RPE-216ENST00000454822 CYP46A1Q9Y6A2 500 aa10.62□□□□□ -0.71
RPE-216ENST00000454822 CCDC158Q5M9N0 1113 aa10.61□□□□□ -0.71
RPE-216ENST00000454822 GORABQ5T7V8 394 aa10.61□□□□□ -0.71
RPE-216ENST00000454822 VPS53Q5VIR6 699 aa10.61□□□□□ -0.71
RPE-216ENST00000454822 RNF20Q5VTR2 975 aa10.61□□□□□ -0.71
RPE-216ENST00000454822 SEC62Q99442 399 aaKnown RBP10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms