RNA–Protein interactions for RNA: ENST00000447726.6

PBX3-207, Transcript of PBX homeobox 3, humanhuman

TSL 1 (best) BASIC

Gene PBX3, Length 2,789 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-207ENST00000447726 TNMDQ9H2S6 317 aa19.41■□□□□ 0.7
PBX3-207ENST00000447726 NCAPD2Q15021 1401 aa19.4■□□□□ 0.7
PBX3-207ENST00000447726 GOLGA6L4A6NEF3 574 aa19.4■□□□□ 0.7
PBX3-207ENST00000447726 GTF2F1P35269 517 aaKnown RBP eCLIP19.4■□□□□ 0.7
PBX3-207ENST00000447726 LEO1Q8WVC0 666 aaPredicted RBP19.4■□□□□ 0.7
PBX3-207ENST00000447726 COL15A1P39059 1388 aa19.4■□□□□ 0.7
PBX3-207ENST00000447726 NEURL1BA8MQ27 555 aa19.4■□□□□ 0.7
PBX3-207ENST00000447726 PTGS1P23219 599 aa19.4■□□□□ 0.7
PBX3-207ENST00000447726 SCAND2PQ9GZW5 306 aaPredicted RBP19.4■□□□□ 0.7
PBX3-207ENST00000447726 ANO6Q4KMQ2 910 aa19.39■□□□□ 0.7
PBX3-207ENST00000447726 ORAI2Q96SN7 254 aa19.39■□□□□ 0.7
PBX3-207ENST00000447726 GCKRQ14397 625 aa19.39■□□□□ 0.69
PBX3-207ENST00000447726 DDX11Q96FC9 970 aa19.39■□□□□ 0.69
PBX3-207ENST00000447726 ALDH8A1Q9H2A2 487 aaPredicted RBP19.39■□□□□ 0.69
PBX3-207ENST00000447726 CBX8Q9HC52 389 aa19.39■□□□□ 0.69
PBX3-207ENST00000447726 DBNLQ9UJU6 430 aaKnown RBP19.39■□□□□ 0.69
PBX3-207ENST00000447726 PDIA4P13667 645 aaKnown RBP19.38■□□□□ 0.69
PBX3-207ENST00000447726 CCDC129Q6ZRS4 1044 aa19.38■□□□□ 0.69
PBX3-207ENST00000447726 XAGE3Q8WTP9 111 aa19.38■□□□□ 0.69
PBX3-207ENST00000447726 PGBD1Q96JS3 809 aa19.38■□□□□ 0.69
PBX3-207ENST00000447726 MYD88Q99836 296 aa19.38■□□□□ 0.69
PBX3-207ENST00000447726 NR1I2O75469 434 aa19.38■□□□□ 0.69
PBX3-207ENST00000447726 TSGA10IPQ3SY00 556 aa19.38■□□□□ 0.69
PBX3-207ENST00000447726 COPS6Q7L5N1 327 aa19.38■□□□□ 0.69
PBX3-207ENST00000447726 SEC62Q99442 399 aaKnown RBP19.38■□□□□ 0.69
PBX3-207ENST00000447726 HMG20BQ9P0W2 317 aa19.38■□□□□ 0.69
PBX3-207ENST00000447726 KIF3AQ9Y496 699 aa19.38■□□□□ 0.69
PBX3-207ENST00000447726 NPHP3Q7Z494 1330 aa19.38■□□□□ 0.69
PBX3-207ENST00000447726 PIP4K2AP48426 406 aaPredicted RBP19.38■□□□□ 0.69
PBX3-207ENST00000447726 JCADQ9P266 1359 aa19.37■□□□□ 0.69
PBX3-207ENST00000447726 GOLGA6L6A8MZA4 724 aa19.37■□□□□ 0.69
PBX3-207ENST00000447726 ZNF790Q6PG37 636 aa19.37■□□□□ 0.69
PBX3-207ENST00000447726 CHD2O14647 1828 aaKnown RBP19.37■□□□□ 0.69
PBX3-207ENST00000447726 TPM3P06753 285 aa19.37■□□□□ 0.69
PBX3-207ENST00000447726 NEXNQ0ZGT2 675 aa19.37■□□□□ 0.69
PBX3-207ENST00000447726 USPL1Q5W0Q7 1092 aa19.37■□□□□ 0.69
PBX3-207ENST00000447726 OVOS2A0A0G2JMS6 1433 aa19.36■□□□□ 0.69
PBX3-207ENST00000447726 TFCP2Q12800 502 aa19.36■□□□□ 0.69
PBX3-207ENST00000447726 BRF1Q92994 677 aa19.36■□□□□ 0.69
PBX3-207ENST00000447726 GTF3C6Q969F1 213 aa19.36■□□□□ 0.69
PBX3-207ENST00000447726 CCDC186Q7Z3E2 898 aa19.36■□□□□ 0.69
PBX3-207ENST00000447726 BICD2Q8TD16 824 aa19.36■□□□□ 0.69
PBX3-207ENST00000447726 NEK1Q96PY6 1258 aa19.36■□□□□ 0.69
PBX3-207ENST00000447726 LRRC2Q9BYS8 371 aa19.36■□□□□ 0.69
PBX3-207ENST00000447726 CLSTN2Q9H4D0 955 aa19.36■□□□□ 0.69
PBX3-207ENST00000447726 NRBP1Q9UHY1 535 aa19.36■□□□□ 0.69
PBX3-207ENST00000447726 LRMPQ12912 555 aa19.35■□□□□ 0.69
PBX3-207ENST00000447726 DDX19AQ9NUU7 478 aaKnown RBP19.35■□□□□ 0.69
PBX3-207ENST00000447726 ATP5JP18859 108 aa19.35■□□□□ 0.69
PBX3-207ENST00000447726 TNNI3KQ59H18 835 aa19.35■□□□□ 0.69
PBX3-207ENST00000447726 Q6ZUG5 572 aa19.35■□□□□ 0.69
PBX3-207ENST00000447726 DNAJC2Q99543 621 aaKnown RBP19.35■□□□□ 0.69
PBX3-207ENST00000447726 METTL22Q9BUU2 404 aaPredicted RBP19.35■□□□□ 0.69
PBX3-207ENST00000447726 CCDC94Q9BW85 323 aaPredicted RBP19.35■□□□□ 0.69
PBX3-207ENST00000447726 BCL2L12Q9HB09 334 aa19.35■□□□□ 0.69
PBX3-207ENST00000447726 FPGT-TNNI3KV9GXZ4 949 aa19.35■□□□□ 0.69
PBX3-207ENST00000447726 RIOK3O14730 519 aaKnown RBP19.34■□□□□ 0.69
PBX3-207ENST00000447726 PTPN12Q05209 780 aaKnown RBP19.34■□□□□ 0.69
PBX3-207ENST00000447726 RBM43Q6ZSC3 357 aaKnown RBP19.34■□□□□ 0.69
PBX3-207ENST00000447726 CYP21A2P08686 494 aa19.34■□□□□ 0.69
PBX3-207ENST00000447726 RFX5P48382 616 aaPredicted RBP19.34■□□□□ 0.69
PBX3-207ENST00000447726 RESTQ13127 1097 aa19.34■□□□□ 0.69
PBX3-207ENST00000447726 NFATC2IPQ8NCF5 419 aa19.34■□□□□ 0.69
PBX3-207ENST00000447726 DNAJC25Q9H1X3 360 aa19.34■□□□□ 0.69
PBX3-207ENST00000447726 COPRSQ9NQ92 184 aa19.34■□□□□ 0.69
PBX3-207ENST00000447726 HSP90B1P14625 803 aaKnown RBP19.33■□□□□ 0.69
PBX3-207ENST00000447726 TRIM5Q9C035 493 aa19.33■□□□□ 0.69
PBX3-207ENST00000447726 CCDC9Q9Y3X0 531 aaKnown RBP19.33■□□□□ 0.69
PBX3-207ENST00000447726 CEBPZQ03701 1054 aaKnown RBP19.33■□□□□ 0.68
PBX3-207ENST00000447726 KRT32Q14532 448 aa19.33■□□□□ 0.68
PBX3-207ENST00000447726 DRC7Q8IY82 874 aa19.33■□□□□ 0.68
PBX3-207ENST00000447726 DBNDD2Q9BQY9 259 aa19.33■□□□□ 0.68
PBX3-207ENST00000447726 ZNF609O15014 1411 aa19.33■□□□□ 0.68
PBX3-207ENST00000447726 ZNF496Q96IT1 587 aaPredicted RBP19.32■□□□□ 0.68
PBX3-207ENST00000447726 ZNF165P49910 485 aa19.32■□□□□ 0.68
PBX3-207ENST00000447726 ANKRD13DQ6ZTN6 518 aa19.32■□□□□ 0.68
PBX3-207ENST00000447726 DDX46Q7L014 1031 aaKnown RBP19.32■□□□□ 0.68
PBX3-207ENST00000447726 UBE3BQ7Z3V4 1068 aa19.32■□□□□ 0.68
PBX3-207ENST00000447726 USP16Q9Y5T5 823 aa19.32■□□□□ 0.68
PBX3-207ENST00000447726 FER1L4A9Z1Z3 1794 aa19.32■□□□□ 0.68
PBX3-207ENST00000447726 H3BQV1 296 aa19.32■□□□□ 0.68
PBX3-207ENST00000447726 ZNF75DP51815 510 aa19.32■□□□□ 0.68
PBX3-207ENST00000447726 SCRN1Q12765 414 aa19.32■□□□□ 0.68
PBX3-207ENST00000447726 SLFNL1Q499Z3 407 aa19.32■□□□□ 0.68
PBX3-207ENST00000447726 IFFO2Q5TF58 517 aa19.32■□□□□ 0.68
PBX3-207ENST00000447726 PRDM10Q9NQV6 1147 aa19.32■□□□□ 0.68
PBX3-207ENST00000447726 PHRF1Q9P1Y6 1649 aaKnown RBP19.32■□□□□ 0.68
PBX3-207ENST00000447726 FOSBP53539 338 aa19.31■□□□□ 0.68
PBX3-207ENST00000447726 SLC52A2Q9HAB3 445 aa19.31■□□□□ 0.68
PBX3-207ENST00000447726 MRC1P22897 1456 aa19.31■□□□□ 0.68
PBX3-207ENST00000447726 ZC3H6P61129 1189 aaKnown RBP19.31■□□□□ 0.68
PBX3-207ENST00000447726 STOX1Q6ZVD7 989 aa19.31■□□□□ 0.68
PBX3-207ENST00000447726 ANKLE2Q86XL3 938 aa19.31■□□□□ 0.68
PBX3-207ENST00000447726 PLA2G4DQ86XP0 818 aa19.31■□□□□ 0.68
PBX3-207ENST00000447726 TDRD7Q8NHU6 1098 aaKnown RBP19.31■□□□□ 0.68
PBX3-207ENST00000447726 ATP5J2-PTCD1G3V325 749 aa19.3■□□□□ 0.68
PBX3-207ENST00000447726 PTCD1O75127 700 aaKnown RBP19.3■□□□□ 0.68
PBX3-207ENST00000447726 CHAF1AQ13111 956 aaPredicted RBP19.3■□□□□ 0.68
PBX3-207ENST00000447726 FTOQ9C0B1 505 aaKnown RBP eCLIP19.3■□□□□ 0.68
PBX3-207ENST00000447726 LRP10Q7Z4F1 713 aa19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms