RNA–Protein interactions for RNA: ENST00000444166.1

COMMD1-203, Transcript of copper metabolism domain containing 1, humanhuman

TSL 3

Gene COMMD1, Length 743 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-203ENST00000444166 DPP8Q6V1X1 898 aaPredicted RBP13.45□□□□□ -0.26
COMMD1-203ENST00000444166 GIGYF2Q6Y7W6 1299 aaKnown RBP13.45□□□□□ -0.26
COMMD1-203ENST00000444166 CTU1Q7Z7A3 348 aaKnown RBP13.45□□□□□ -0.26
COMMD1-203ENST00000444166 SP8Q8IXZ3 490 aa13.45□□□□□ -0.26
COMMD1-203ENST00000444166 MICALL2Q8IY33 904 aa13.45□□□□□ -0.26
COMMD1-203ENST00000444166 NLRP3Q96P20 1036 aa13.45□□□□□ -0.26
COMMD1-203ENST00000444166 ZBTB3Q9H5J0 574 aa13.45□□□□□ -0.26
COMMD1-203ENST00000444166 GBA2Q9HCG7 927 aaPredicted RBP13.45□□□□□ -0.26
COMMD1-203ENST00000444166 MIS18AQ9NYP9 233 aa13.45□□□□□ -0.26
COMMD1-203ENST00000444166 POLR2AP24928 1970 aaKnown RBP13.45□□□□□ -0.26
COMMD1-203ENST00000444166 AKAP11Q9UKA4 1901 aa13.45□□□□□ -0.26
COMMD1-203ENST00000444166 H7C1D1 291 aa13.44□□□□□ -0.26
COMMD1-203ENST00000444166 TRPA1O75762 1119 aa13.44□□□□□ -0.26
COMMD1-203ENST00000444166 PARP10Q53GL7 1025 aa13.44□□□□□ -0.26
COMMD1-203ENST00000444166 KRT26Q7Z3Y9 468 aa13.44□□□□□ -0.26
COMMD1-203ENST00000444166 MPNDQ8N594 471 aa13.44□□□□□ -0.26
COMMD1-203ENST00000444166 DPF2Q92785 391 aa13.44□□□□□ -0.26
COMMD1-203ENST00000444166 TMX4Q9H1E5 349 aaPredicted RBP13.44□□□□□ -0.26
COMMD1-203ENST00000444166 KDM3BQ7LBC6 1761 aa13.44□□□□□ -0.26
COMMD1-203ENST00000444166 BBOX1O75936 387 aa13.43□□□□□ -0.26
COMMD1-203ENST00000444166 EGFRP00533 1210 aa13.43□□□□□ -0.26
COMMD1-203ENST00000444166 SLC10A3P09131 477 aa13.43□□□□□ -0.26
COMMD1-203ENST00000444166 SAMD7Q7Z3H4 446 aa13.43□□□□□ -0.26
COMMD1-203ENST00000444166 LRP10Q7Z4F1 713 aa13.43□□□□□ -0.26
COMMD1-203ENST00000444166 PPP1R42Q7Z4L9 355 aa13.43□□□□□ -0.26
COMMD1-203ENST00000444166 CSRNP1Q96S65 589 aa13.43□□□□□ -0.26
COMMD1-203ENST00000444166 HPS5Q9UPZ3 1129 aa13.43□□□□□ -0.26
COMMD1-203ENST00000444166 RRP7AQ9Y3A4 280 aaKnown RBP13.43□□□□□ -0.26
COMMD1-203ENST00000444166 MKI67P46013 3256 aaKnown RBP13.42□□□□□ -0.26
COMMD1-203ENST00000444166 MYL6BP14649 208 aa13.42□□□□□ -0.26
COMMD1-203ENST00000444166 ZNF157P51786 506 aaPredicted RBP13.42□□□□□ -0.26
COMMD1-203ENST00000444166 EIF4A1P60842 406 aaKnown RBP13.42□□□□□ -0.26
COMMD1-203ENST00000444166 C2orf69Q8N8R5 385 aa13.42□□□□□ -0.26
COMMD1-203ENST00000444166 ZBTB12Q9Y330 459 aaPredicted RBP13.42□□□□□ -0.26
COMMD1-203ENST00000444166 LAMB2P55268 1798 aa13.42□□□□□ -0.26
COMMD1-203ENST00000444166 ANKRD36CQ5JPF3 1778 aa13.42□□□□□ -0.26
COMMD1-203ENST00000444166 LRRC37AA6NMS7 1700 aa13.42□□□□□ -0.26
COMMD1-203ENST00000444166 ADM5C9JUS6 153 aa13.41□□□□□ -0.26
COMMD1-203ENST00000444166 UTP14AQ9BVJ6 771 aaKnown RBP13.41□□□□□ -0.26
COMMD1-203ENST00000444166 HTTP42858 3142 aa13.41□□□□□ -0.26
COMMD1-203ENST00000444166 ERBB4Q15303 1308 aa13.4□□□□□ -0.26
COMMD1-203ENST00000444166 PSMD14O00487 310 aa13.4□□□□□ -0.26
COMMD1-203ENST00000444166 U2AF1L5P0DN76 240 aaPredicted RBP13.4□□□□□ -0.26
COMMD1-203ENST00000444166 U2AF1Q01081 240 aaKnown RBP eCLIP13.4□□□□□ -0.26
COMMD1-203ENST00000444166 TBC1D10BQ4KMP7 808 aaPredicted RBP13.4□□□□□ -0.26
COMMD1-203ENST00000444166 PNISRQ8TF01 805 aaKnown RBP13.4□□□□□ -0.26
COMMD1-203ENST00000444166 CFAP53Q96M91 514 aa13.4□□□□□ -0.26
COMMD1-203ENST00000444166 NUDCQ9Y266 331 aa13.4□□□□□ -0.26
COMMD1-203ENST00000444166 TRIM26Q12899 539 aaPredicted RBP13.39□□□□□ -0.27
COMMD1-203ENST00000444166 GRAPQ13588 217 aa13.39□□□□□ -0.27
COMMD1-203ENST00000444166 GRAPLQ8TC17 118 aaPredicted RBP13.39□□□□□ -0.27
COMMD1-203ENST00000444166 DCPSQ96C86 337 aaKnown RBP13.39□□□□□ -0.27
COMMD1-203ENST00000444166 TAF1P21675 1872 aa13.38□□□□□ -0.27
COMMD1-203ENST00000444166 RTL9Q8NET4 1388 aa13.38□□□□□ -0.27
COMMD1-203ENST00000444166 HCLS1P14317 486 aaPredicted RBP13.38□□□□□ -0.27
COMMD1-203ENST00000444166 RPS12P25398 132 aaKnown RBP13.38□□□□□ -0.27
COMMD1-203ENST00000444166 PDIA6Q15084 440 aa13.38□□□□□ -0.27
COMMD1-203ENST00000444166 PKN2Q16513 984 aaKnown RBP13.38□□□□□ -0.27
COMMD1-203ENST00000444166 RASAL3Q86YV0 1011 aa13.38□□□□□ -0.27
COMMD1-203ENST00000444166 REM2Q8IYK8 340 aaPredicted RBP13.38□□□□□ -0.27
COMMD1-203ENST00000444166 CNGB1Q14028 1251 aaPredicted RBP13.37□□□□□ -0.27
COMMD1-203ENST00000444166 DDX46Q7L014 1031 aaKnown RBP13.37□□□□□ -0.27
COMMD1-203ENST00000444166 TMC4Q7Z404 712 aa13.37□□□□□ -0.27
COMMD1-203ENST00000444166 NLRP10Q86W26 655 aa13.37□□□□□ -0.27
COMMD1-203ENST00000444166 GCC1Q96CN9 775 aa13.37□□□□□ -0.27
COMMD1-203ENST00000444166 DLG5Q8TDM6 1919 aa13.37□□□□□ -0.27
COMMD1-203ENST00000444166 ASTN2O75129 1339 aaPredicted RBP13.37□□□□□ -0.27
COMMD1-203ENST00000444166 WASHC4Q2M389 1173 aa13.36□□□□□ -0.27
COMMD1-203ENST00000444166 SULF1Q8IWU6 871 aa13.36□□□□□ -0.27
COMMD1-203ENST00000444166 CDCA5Q96FF9 252 aa13.36□□□□□ -0.27
COMMD1-203ENST00000444166 THUMPD2Q9BTF0 503 aaKnown RBP13.36□□□□□ -0.27
COMMD1-203ENST00000444166 DBNDD1Q9H9R9 158 aa13.36□□□□□ -0.27
COMMD1-203ENST00000444166 KCNQ5Q9NR82 932 aa13.36□□□□□ -0.27
COMMD1-203ENST00000444166 GGA3Q9NZ52 723 aa13.36□□□□□ -0.27
COMMD1-203ENST00000444166 KIAA0100Q14667 2235 aaKnown RBP13.36□□□□□ -0.27
COMMD1-203ENST00000444166 SCN9AQ15858 1988 aa13.36□□□□□ -0.27
COMMD1-203ENST00000444166 PROSER3Q2NL68 480 aa13.35□□□□□ -0.27
COMMD1-203ENST00000444166 KIF4BQ2VIQ3 1234 aa13.35□□□□□ -0.27
COMMD1-203ENST00000444166 RBM26Q5T8P6 1007 aaKnown RBP13.35□□□□□ -0.27
COMMD1-203ENST00000444166 ZNF296Q8WUU4 475 aaPredicted RBP13.35□□□□□ -0.27
COMMD1-203ENST00000444166 PAPPA2Q9BXP8 1791 aa13.35□□□□□ -0.27
COMMD1-203ENST00000444166 CEP290O15078 2479 aa13.34□□□□□ -0.27
COMMD1-203ENST00000444166 ZNF609O15014 1411 aa13.34□□□□□ -0.27
COMMD1-203ENST00000444166 ECE2O60344 883 aa13.34□□□□□ -0.27
COMMD1-203ENST00000444166 FKBP1BP68106 108 aa13.34□□□□□ -0.27
COMMD1-203ENST00000444166 NOM1Q5C9Z4 860 aaKnown RBP13.34□□□□□ -0.27
COMMD1-203ENST00000444166 HABP4Q5JVS0 413 aaKnown RBP13.34□□□□□ -0.27
COMMD1-203ENST00000444166 POLLQ9UGP5 575 aa13.34□□□□□ -0.27
COMMD1-203ENST00000444166 SH3TC1Q8TE82 1336 aa13.34□□□□□ -0.27
COMMD1-203ENST00000444166 COL4A1P02462 1669 aa13.34□□□□□ -0.27
COMMD1-203ENST00000444166 DDX60Q8IY21 1712 aaKnown RBP13.33□□□□□ -0.27
COMMD1-203ENST00000444166 VIL1P09327 827 aaKnown RBP13.33□□□□□ -0.28
COMMD1-203ENST00000444166 PPP2R1AP30153 589 aa13.33□□□□□ -0.28
COMMD1-203ENST00000444166 FBXO46Q6PJ61 603 aaPredicted RBP13.33□□□□□ -0.28
COMMD1-203ENST00000444166 PCGF6Q9BYE7 350 aa13.33□□□□□ -0.28
COMMD1-203ENST00000444166 HDAC9Q9UKV0 1011 aa13.33□□□□□ -0.28
COMMD1-203ENST00000444166 RIMBP2O15034 1052 aa13.32□□□□□ -0.28
COMMD1-203ENST00000444166 TBC1D8O95759 1140 aa13.32□□□□□ -0.28
COMMD1-203ENST00000444166 ANXA1P04083 346 aa13.32□□□□□ -0.28
COMMD1-203ENST00000444166 ZNF280AP59817 542 aaPredicted RBP13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms