RNA–Protein interactions for RNA: ENST00000440346.1

PTPA-221, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 4

Gene PTPA, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-221ENST00000440346 KRT24Q2M2I5 525 aa9.14□□□□□ -0.95
PTPA-221ENST00000440346 SLC51AQ86UW1 340 aa9.14□□□□□ -0.95
PTPA-221ENST00000440346 GPC2Q8N158 579 aa9.14□□□□□ -0.95
PTPA-221ENST00000440346 NYXQ9GZU5 481 aa9.14□□□□□ -0.95
PTPA-221ENST00000440346 DBF4Q9UBU7 674 aaPredicted RBP9.14□□□□□ -0.95
PTPA-221ENST00000440346 TMEM88BA6NKF7 163 aa9.13□□□□□ -0.95
PTPA-221ENST00000440346 VAMP4O75379 141 aa9.13□□□□□ -0.95
PTPA-221ENST00000440346 GPTP24298 496 aa9.13□□□□□ -0.95
PTPA-221ENST00000440346 GTF2E1P29083 439 aaPredicted RBP9.13□□□□□ -0.95
PTPA-221ENST00000440346 VEGFBP49765 207 aa9.13□□□□□ -0.95
PTPA-221ENST00000440346 EAPPQ56P03 285 aaPredicted RBP9.13□□□□□ -0.95
PTPA-221ENST00000440346 HDGFL1Q5TGJ6 251 aa9.13□□□□□ -0.95
PTPA-221ENST00000440346 CCDC30Q5VVM6 783 aa9.13□□□□□ -0.95
PTPA-221ENST00000440346 PNMA8AQ86V59 439 aaPredicted RBP9.13□□□□□ -0.95
PTPA-221ENST00000440346 TSPYL6Q8N831 410 aa9.13□□□□□ -0.95
PTPA-221ENST00000440346 DDX21Q9NR30 783 aaKnown RBP eCLIP9.13□□□□□ -0.95
PTPA-221ENST00000440346 RASSF10A6NK89 507 aa9.12□□□□□ -0.95
PTPA-221ENST00000440346 ELL2O00472 640 aaPredicted RBP9.12□□□□□ -0.95
PTPA-221ENST00000440346 NTSR2O95665 410 aa9.12□□□□□ -0.95
PTPA-221ENST00000440346 MYL6BP14649 208 aa9.12□□□□□ -0.95
PTPA-221ENST00000440346 ALDH1L2Q3SY69 923 aa9.12□□□□□ -0.95
PTPA-221ENST00000440346 SUSD4Q5VX71 490 aa9.12□□□□□ -0.95
PTPA-221ENST00000440346 MAP1SQ66K74 1059 aaPredicted RBP9.12□□□□□ -0.95
PTPA-221ENST00000440346 CC2D2BQ6DHV5 1058 aa9.12□□□□□ -0.95
PTPA-221ENST00000440346 KIF6Q6ZMV9 814 aa9.12□□□□□ -0.95
PTPA-221ENST00000440346 C3orf67Q6ZVT6 689 aa9.12□□□□□ -0.95
PTPA-221ENST00000440346 LRP10Q7Z4F1 713 aa9.12□□□□□ -0.95
PTPA-221ENST00000440346 ZNF34Q8IZ26 560 aa9.12□□□□□ -0.95
PTPA-221ENST00000440346 CNTROBQ8N137 903 aa9.12□□□□□ -0.95
PTPA-221ENST00000440346 YTHDC1Q96MU7 727 aaKnown RBP9.12□□□□□ -0.95
PTPA-221ENST00000440346 CRAMP1Q96RY5 1269 aa9.12□□□□□ -0.95
PTPA-221ENST00000440346 ZBTB3Q9H5J0 574 aa9.12□□□□□ -0.95
PTPA-221ENST00000440346 PRDM10Q9NQV6 1147 aa9.12□□□□□ -0.95
PTPA-221ENST00000440346 CLEC11AQ9Y240 323 aa9.12□□□□□ -0.95
PTPA-221ENST00000440346 POLR2AP24928 1970 aaKnown RBP9.12□□□□□ -0.95
PTPA-221ENST00000440346 DDX60Q8IY21 1712 aaKnown RBP9.11□□□□□ -0.95
PTPA-221ENST00000440346 EIF2S2P20042 333 aaKnown RBP9.11□□□□□ -0.95
PTPA-221ENST00000440346 SCNN1DP51172 638 aa9.11□□□□□ -0.95
PTPA-221ENST00000440346 PDIA6Q15084 440 aa9.11□□□□□ -0.95
PTPA-221ENST00000440346 GIGYF2Q6Y7W6 1299 aaKnown RBP9.11□□□□□ -0.95
PTPA-221ENST00000440346 JDP2Q8WYK2 163 aa9.11□□□□□ -0.95
PTPA-221ENST00000440346 RPGRQ92834 1020 aaKnown RBP9.11□□□□□ -0.95
PTPA-221ENST00000440346 STK31Q9BXU1 1019 aa9.11□□□□□ -0.95
PTPA-221ENST00000440346 HYPKQ9NX55 129 aa9.11□□□□□ -0.95
PTPA-221ENST00000440346 WBP1LQ9NX94 342 aa9.11□□□□□ -0.95
PTPA-221ENST00000440346 LRRC37AA6NMS7 1700 aa9.11□□□□□ -0.95
PTPA-221ENST00000440346 CTCFP49711 727 aaPredicted RBP9.1□□□□□ -0.95
PTPA-221ENST00000440346 GRIPAP1Q4V328 841 aa9.1□□□□□ -0.95
PTPA-221ENST00000440346 CHPF2Q9P2E5 772 aa9.1□□□□□ -0.95
PTPA-221ENST00000440346 GJA3Q9Y6H8 435 aa9.1□□□□□ -0.95
PTPA-221ENST00000440346 DUOX1Q9NRD9 1551 aa9.09□□□□□ -0.95
PTPA-221ENST00000440346 PPEF1O14829 653 aaPredicted RBP9.09□□□□□ -0.95
PTPA-221ENST00000440346 EPS15P42566 896 aa9.09□□□□□ -0.95
PTPA-221ENST00000440346 BRPF1P55201 1214 aaPredicted RBP9.09□□□□□ -0.95
PTPA-221ENST00000440346 EIF6P56537 245 aaKnown RBP9.09□□□□□ -0.95
PTPA-221ENST00000440346 FMR1Q06787 632 aaKnown RBP eCLIP9.09□□□□□ -0.95
PTPA-221ENST00000440346 PROSER3Q2NL68 480 aa9.09□□□□□ -0.95
PTPA-221ENST00000440346 DEFB115Q30KQ5 88 aa9.09□□□□□ -0.95
PTPA-221ENST00000440346 PARP10Q53GL7 1025 aa9.09□□□□□ -0.95
PTPA-221ENST00000440346 SLC10A5Q5PT55 438 aa9.09□□□□□ -0.95
PTPA-221ENST00000440346 LARGE2Q8N3Y3 721 aa9.09□□□□□ -0.95
PTPA-221ENST00000440346 RBM17Q96I25 401 aaKnown RBP9.09□□□□□ -0.95
PTPA-221ENST00000440346 TCERG1O14776 1098 aaKnown RBP9.08□□□□□ -0.96
PTPA-221ENST00000440346 PPP1R42Q7Z4L9 355 aa9.08□□□□□ -0.96
PTPA-221ENST00000440346 NECTIN2Q92692 538 aa9.08□□□□□ -0.96
PTPA-221ENST00000440346 AIDAQ96BJ3 306 aa9.08□□□□□ -0.96
PTPA-221ENST00000440346 ATP6V0A2Q9Y487 856 aa9.08□□□□□ -0.96
PTPA-221ENST00000440346 CASP8AP2Q9UKL3 1982 aa9.08□□□□□ -0.96
PTPA-221ENST00000440346 ABCC4O15439 1325 aa9.07□□□□□ -0.96
PTPA-221ENST00000440346 WDR33Q9C0J8 1336 aaKnown RBP9.07□□□□□ -0.96
PTPA-221ENST00000440346 PPIP5K2O43314 1243 aa9.07□□□□□ -0.96
PTPA-221ENST00000440346 DDX58O95786 925 aaKnown RBP9.07□□□□□ -0.96
PTPA-221ENST00000440346 ANXA1P04083 346 aa9.07□□□□□ -0.96
PTPA-221ENST00000440346 HSPA8P11142 646 aaKnown RBP9.07□□□□□ -0.96
PTPA-221ENST00000440346 LMOD1P29536 600 aaPredicted RBP9.07□□□□□ -0.96
PTPA-221ENST00000440346 LBX1P52954 281 aa9.07□□□□□ -0.96
PTPA-221ENST00000440346 RARSP54136 660 aaKnown RBP9.07□□□□□ -0.96
PTPA-221ENST00000440346 AOC3Q16853 763 aa9.07□□□□□ -0.96
PTPA-221ENST00000440346 USP50Q70EL3 339 aaPredicted RBP9.07□□□□□ -0.96
PTPA-221ENST00000440346 NIM1KQ8IY84 436 aa9.07□□□□□ -0.96
PTPA-221ENST00000440346 NLRP3Q96P20 1036 aa9.07□□□□□ -0.96
PTPA-221ENST00000440346 UTP14AQ9BVJ6 771 aaKnown RBP9.07□□□□□ -0.96
PTPA-221ENST00000440346 RTFDC1Q9BY42 306 aaPredicted RBP9.07□□□□□ -0.96
PTPA-221ENST00000440346 VPS33BQ9H267 617 aa9.07□□□□□ -0.96
PTPA-221ENST00000440346 ABT1Q9ULW3 272 aaKnown RBP9.07□□□□□ -0.96
PTPA-221ENST00000440346 COL4A1P02462 1669 aa9.07□□□□□ -0.96
PTPA-221ENST00000440346 PTPRCP08575 1304 aa9.06□□□□□ -0.96
PTPA-221ENST00000440346 KIF16BQ96L93 1317 aa9.06□□□□□ -0.96
PTPA-221ENST00000440346 SCN9AQ15858 1988 aa9.06□□□□□ -0.96
PTPA-221ENST00000440346 TRAF5O00463 557 aa9.06□□□□□ -0.96
PTPA-221ENST00000440346 CXCL9Q07325 125 aa9.06□□□□□ -0.96
PTPA-221ENST00000440346 FLIIQ13045 1269 aa9.06□□□□□ -0.96
PTPA-221ENST00000440346 MKRN4PQ13434 485 aaPredicted RBP9.06□□□□□ -0.96
PTPA-221ENST00000440346 CST9Q5W186 159 aa9.06□□□□□ -0.96
PTPA-221ENST00000440346 COPS6Q7L5N1 327 aa9.06□□□□□ -0.96
PTPA-221ENST00000440346 NLRP10Q86W26 655 aa9.06□□□□□ -0.96
PTPA-221ENST00000440346 MRPL50Q8N5N7 158 aaKnown RBP9.06□□□□□ -0.96
PTPA-221ENST00000440346 SPDYE1Q8NFV5 336 aaPredicted RBP9.06□□□□□ -0.96
PTPA-221ENST00000440346 PLBD2Q8NHP8 589 aa9.06□□□□□ -0.96
PTPA-221ENST00000440346 XAGE3Q8WTP9 111 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms