RNA–Protein interactions for RNA: ENST00000439681.1

UBR3-205, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 2

Gene UBR3, Length 2,183 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-205ENST00000439681 ST5P78524 1137 aa9.33□□□□□ -0.92
UBR3-205ENST00000439681 NLRP3Q96P20 1036 aa9.33□□□□□ -0.92
UBR3-205ENST00000439681 BRIP1Q9BX63 1249 aa9.33□□□□□ -0.92
UBR3-205ENST00000439681 GREM2Q9H772 168 aa9.33□□□□□ -0.92
UBR3-205ENST00000439681 KDM2BQ8NHM5 1336 aa9.33□□□□□ -0.92
UBR3-205ENST00000439681 ANKRD36CQ5JPF3 1778 aa9.33□□□□□ -0.92
UBR3-205ENST00000439681 PTPN12Q05209 780 aaKnown RBP9.33□□□□□ -0.92
UBR3-205ENST00000439681 FAM161AQ3B820 660 aa9.33□□□□□ -0.92
UBR3-205ENST00000439681 KLHDC4Q8TBB5 520 aa9.33□□□□□ -0.92
UBR3-205ENST00000439681 DCTPP1Q9H773 170 aa9.33□□□□□ -0.92
UBR3-205ENST00000439681 COL24A1Q17RW2 1714 aa9.32□□□□□ -0.92
UBR3-205ENST00000439681 NPHP1O15259 732 aa9.32□□□□□ -0.92
UBR3-205ENST00000439681 HMMRO75330 724 aa9.32□□□□□ -0.92
UBR3-205ENST00000439681 PTGER2P43116 358 aa9.32□□□□□ -0.92
UBR3-205ENST00000439681 CRY2Q49AN0 593 aa9.32□□□□□ -0.92
UBR3-205ENST00000439681 CCDC152Q4G0S7 254 aa9.32□□□□□ -0.92
UBR3-205ENST00000439681 SEC31BQ9NQW1 1179 aa9.32□□□□□ -0.92
UBR3-205ENST00000439681 PA2G4Q9UQ80 394 aaKnown RBP9.32□□□□□ -0.92
UBR3-205ENST00000439681 NOP58Q9Y2X3 529 aaKnown RBP9.32□□□□□ -0.92
UBR3-205ENST00000439681 CHMP3Q9Y3E7 222 aa9.32□□□□□ -0.92
UBR3-205ENST00000439681 RIC1Q4ADV7 1423 aa9.32□□□□□ -0.92
UBR3-205ENST00000439681 RTL9Q8NET4 1388 aa9.32□□□□□ -0.92
UBR3-205ENST00000439681 ITGA6P23229 1130 aa9.31□□□□□ -0.92
UBR3-205ENST00000439681 SMC5Q8IY18 1101 aa9.31□□□□□ -0.92
UBR3-205ENST00000439681 ZNF594Q96JF6 807 aaPredicted RBP9.31□□□□□ -0.92
UBR3-205ENST00000439681 COPRSQ9NQ92 184 aa9.31□□□□□ -0.92
UBR3-205ENST00000439681 CASZ1Q86V15 1759 aa9.31□□□□□ -0.92
UBR3-205ENST00000439681 IFIT5Q13325 482 aaKnown RBP9.31□□□□□ -0.92
UBR3-205ENST00000439681 CCDC57Q2TAC2 916 aa9.31□□□□□ -0.92
UBR3-205ENST00000439681 AFDNP55196 1824 aaKnown RBP9.31□□□□□ -0.92
UBR3-205ENST00000439681 ANKRD18BA2A2Z9 1011 aa9.3□□□□□ -0.92
UBR3-205ENST00000439681 SURF6O75683 361 aaKnown RBP9.3□□□□□ -0.92
UBR3-205ENST00000439681 HOXA10P31260 410 aaPredicted RBP9.3□□□□□ -0.92
UBR3-205ENST00000439681 CENPQQ7L2Z9 268 aaPredicted RBP9.3□□□□□ -0.92
UBR3-205ENST00000439681 POLD1P28340 1107 aa9.3□□□□□ -0.92
UBR3-205ENST00000439681 PDE6BP35913 854 aa9.3□□□□□ -0.92
UBR3-205ENST00000439681 ATG9AQ7Z3C6 839 aa9.3□□□□□ -0.92
UBR3-205ENST00000439681 GCC1Q96CN9 775 aa9.3□□□□□ -0.92
UBR3-205ENST00000439681 PUS3Q9BZE2 481 aaKnown RBP9.3□□□□□ -0.92
UBR3-205ENST00000439681 EXOC6BQ9Y2D4 811 aa9.3□□□□□ -0.92
UBR3-205ENST00000439681 NRXN2Q9P2S2 1712 aa9.29□□□□□ -0.92
UBR3-205ENST00000439681 SRGNP10124 158 aa9.29□□□□□ -0.92
UBR3-205ENST00000439681 LRRC24Q50LG9 513 aa9.29□□□□□ -0.92
UBR3-205ENST00000439681 CELF1Q92879 486 aaKnown RBP9.29□□□□□ -0.92
UBR3-205ENST00000439681 EYA2O00167 538 aa9.29□□□□□ -0.92
UBR3-205ENST00000439681 SASH1O94885 1247 aa9.29□□□□□ -0.92
UBR3-205ENST00000439681 DDX46Q7L014 1031 aaKnown RBP9.29□□□□□ -0.92
UBR3-205ENST00000439681 SIL1Q9H173 461 aa9.29□□□□□ -0.92
UBR3-205ENST00000439681 SPON1Q9HCB6 807 aa9.29□□□□□ -0.92
UBR3-205ENST00000439681 RIPOR2Q9Y4F9 1068 aa9.29□□□□□ -0.92
UBR3-205ENST00000439681 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.29□□□□□ -0.92
UBR3-205ENST00000439681 C10orf71Q711Q0 1435 aa9.28□□□□□ -0.92
UBR3-205ENST00000439681 RAB11FIP3O75154 756 aa9.28□□□□□ -0.92
UBR3-205ENST00000439681 CIAO1O76071 339 aa9.28□□□□□ -0.92
UBR3-205ENST00000439681 RPS8P62241 208 aaKnown RBP9.28□□□□□ -0.92
UBR3-205ENST00000439681 G3BP1Q13283 466 aaKnown RBP eCLIP9.28□□□□□ -0.92
UBR3-205ENST00000439681 C2CD5Q86YS7 1000 aa9.28□□□□□ -0.92
UBR3-205ENST00000439681 RBM17Q96I25 401 aaKnown RBP9.28□□□□□ -0.92
UBR3-205ENST00000439681 CRAMP1Q96RY5 1269 aa9.28□□□□□ -0.92
UBR3-205ENST00000439681 DDX60Q8IY21 1712 aaKnown RBP9.28□□□□□ -0.92
UBR3-205ENST00000439681 NPR1P16066 1061 aa9.27□□□□□ -0.92
UBR3-205ENST00000439681 CHRNA5P30532 468 aa9.27□□□□□ -0.92
UBR3-205ENST00000439681 NUCB1Q02818 461 aa9.27□□□□□ -0.92
UBR3-205ENST00000439681 GRAPQ13588 217 aa9.27□□□□□ -0.92
UBR3-205ENST00000439681 TAF7LQ5H9L4 462 aa9.27□□□□□ -0.92
UBR3-205ENST00000439681 LDHAL6AQ6ZMR3 332 aa9.27□□□□□ -0.92
UBR3-205ENST00000439681 GRAPLQ8TC17 118 aaPredicted RBP9.27□□□□□ -0.92
UBR3-205ENST00000439681 RPGRQ92834 1020 aaKnown RBP9.27□□□□□ -0.92
UBR3-205ENST00000439681 CDC5LQ99459 802 aaKnown RBP9.27□□□□□ -0.92
UBR3-205ENST00000439681 FBXO3Q9UK99 471 aa9.27□□□□□ -0.92
UBR3-205ENST00000439681 H0YIN7 160 aa9.27□□□□□ -0.93
UBR3-205ENST00000439681 APBB1O00213 710 aa9.27□□□□□ -0.93
UBR3-205ENST00000439681 SMARCA5O60264 1052 aaPredicted RBP9.27□□□□□ -0.93
UBR3-205ENST00000439681 COL4A1P02462 1669 aa9.27□□□□□ -0.93
UBR3-205ENST00000439681 KCNA3P22001 575 aa9.27□□□□□ -0.93
UBR3-205ENST00000439681 IL15P40933 162 aaPredicted RBP9.27□□□□□ -0.93
UBR3-205ENST00000439681 HSP90AB4PQ58FF6 505 aa9.27□□□□□ -0.93
UBR3-205ENST00000439681 ANKRD45Q5TZF3 282 aa9.27□□□□□ -0.93
UBR3-205ENST00000439681 SLC51AQ86UW1 340 aa9.27□□□□□ -0.93
UBR3-205ENST00000439681 ANKRD18AQ8IVF6 992 aa9.27□□□□□ -0.93
UBR3-205ENST00000439681 RHPN1Q8TCX5 695 aa9.27□□□□□ -0.93
UBR3-205ENST00000439681 MASTLQ96GX5 879 aa9.27□□□□□ -0.93
UBR3-205ENST00000439681 TNRC6CQ9HCJ0 1690 aaKnown RBP9.27□□□□□ -0.93
UBR3-205ENST00000439681 BSDC1Q9NW68 430 aaPredicted RBP9.27□□□□□ -0.93
UBR3-205ENST00000439681 PDZRN3Q9UPQ7 1066 aa9.27□□□□□ -0.93
UBR3-205ENST00000439681 A0A0G2JLW4 131 aa9.26□□□□□ -0.93
UBR3-205ENST00000439681 BBOX1O75936 387 aa9.26□□□□□ -0.93
UBR3-205ENST00000439681 IGHMBP2P38935 993 aaKnown RBP9.26□□□□□ -0.93
UBR3-205ENST00000439681 TFCP2Q12800 502 aa9.26□□□□□ -0.93
UBR3-205ENST00000439681 STYK1Q6J9G0 422 aa9.26□□□□□ -0.93
UBR3-205ENST00000439681 DPEP1P16444 411 aa9.26□□□□□ -0.93
UBR3-205ENST00000439681 TGFB2P61812 414 aa9.26□□□□□ -0.93
UBR3-205ENST00000439681 OS9Q13438 667 aaPredicted RBP9.26□□□□□ -0.93
UBR3-205ENST00000439681 CHD1LQ86WJ1 897 aa9.26□□□□□ -0.93
UBR3-205ENST00000439681 SKAP1Q86WV1 359 aa9.26□□□□□ -0.93
UBR3-205ENST00000439681 ERC1Q8IUD2 1116 aa9.26□□□□□ -0.93
UBR3-205ENST00000439681 C16orf71Q8IYS4 520 aaPredicted RBP9.26□□□□□ -0.93
UBR3-205ENST00000439681 KIF1BPQ96EK5 621 aa9.26□□□□□ -0.93
UBR3-205ENST00000439681 MPHOSPH8Q99549 860 aa9.26□□□□□ -0.93
UBR3-205ENST00000439681 LRRCC1Q9C099 1032 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms