RNA–Protein interactions for RNA: ENST00000439445.5

CCDC66-207, Transcript of coiled-coil domain containing 66, humanhuman

TSL 3

Gene CCDC66, Length 709 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-207ENST00000439445 ABCC12Q96J65 1359 aa12.96□□□□□ -0.33
CCDC66-207ENST00000439445 MAPK8IP3Q9UPT6 1336 aa12.96□□□□□ -0.33
CCDC66-207ENST00000439445 TCERG1O14776 1098 aaKnown RBP12.96□□□□□ -0.33
CCDC66-207ENST00000439445 EIF6P56537 245 aaKnown RBP12.96□□□□□ -0.33
CCDC66-207ENST00000439445 CNTROBQ8N137 903 aa12.96□□□□□ -0.33
CCDC66-207ENST00000439445 KDM3BQ7LBC6 1761 aa12.96□□□□□ -0.34
CCDC66-207ENST00000439445 UBN2Q6ZU65 1347 aa12.95□□□□□ -0.34
CCDC66-207ENST00000439445 HOXA10P31260 410 aaPredicted RBP12.95□□□□□ -0.34
CCDC66-207ENST00000439445 VEGFBP49765 207 aa12.95□□□□□ -0.34
CCDC66-207ENST00000439445 MAP1SQ66K74 1059 aaPredicted RBP12.95□□□□□ -0.34
CCDC66-207ENST00000439445 MAMSTRQ6ZN01 415 aa12.95□□□□□ -0.34
CCDC66-207ENST00000439445 RBM17Q96I25 401 aaKnown RBP12.95□□□□□ -0.34
CCDC66-207ENST00000439445 CRAMP1Q96RY5 1269 aa12.95□□□□□ -0.34
CCDC66-207ENST00000439445 FOXN1O15353 648 aa12.94□□□□□ -0.34
CCDC66-207ENST00000439445 EIF2S2P20042 333 aaKnown RBP12.94□□□□□ -0.34
CCDC66-207ENST00000439445 LMOD1P29536 600 aaPredicted RBP12.94□□□□□ -0.34
CCDC66-207ENST00000439445 GRIPAP1Q4V328 841 aa12.94□□□□□ -0.34
CCDC66-207ENST00000439445 GIGYF2Q6Y7W6 1299 aaKnown RBP12.94□□□□□ -0.34
CCDC66-207ENST00000439445 PPP1R42Q7Z4L9 355 aa12.94□□□□□ -0.34
CCDC66-207ENST00000439445 ZNF34Q8IZ26 560 aa12.94□□□□□ -0.34
CCDC66-207ENST00000439445 LARGE2Q8N3Y3 721 aa12.94□□□□□ -0.34
CCDC66-207ENST00000439445 AIDAQ96BJ3 306 aa12.94□□□□□ -0.34
CCDC66-207ENST00000439445 TMX4Q9H1E5 349 aaPredicted RBP12.94□□□□□ -0.34
CCDC66-207ENST00000439445 PPEF1O14829 653 aaPredicted RBP12.93□□□□□ -0.34
CCDC66-207ENST00000439445 NTSR2O95665 410 aa12.93□□□□□ -0.34
CCDC66-207ENST00000439445 PLCG2P16885 1265 aa12.93□□□□□ -0.34
CCDC66-207ENST00000439445 GOLGA2Q08379 1002 aa12.93□□□□□ -0.34
CCDC66-207ENST00000439445 DEFB115Q30KQ5 88 aa12.93□□□□□ -0.34
CCDC66-207ENST00000439445 NLRP3Q96P20 1036 aa12.93□□□□□ -0.34
CCDC66-207ENST00000439445 TSPYL4Q9UJ04 414 aa12.93□□□□□ -0.34
CCDC66-207ENST00000439445 IBTKQ9P2D0 1353 aaPredicted RBP12.93□□□□□ -0.34
CCDC66-207ENST00000439445 ERBB4Q15303 1308 aa12.92□□□□□ -0.34
CCDC66-207ENST00000439445 PARP10Q53GL7 1025 aa12.92□□□□□ -0.34
CCDC66-207ENST00000439445 SNED1Q8TER0 1413 aa12.92□□□□□ -0.34
CCDC66-207ENST00000439445 RIC1Q4ADV7 1423 aa12.91□□□□□ -0.34
CCDC66-207ENST00000439445 EPS15P42566 896 aa12.91□□□□□ -0.34
CCDC66-207ENST00000439445 CTCFP49711 727 aaPredicted RBP12.91□□□□□ -0.34
CCDC66-207ENST00000439445 RIPK4P57078 832 aa12.91□□□□□ -0.34
CCDC66-207ENST00000439445 IRX5P78411 483 aaPredicted RBP12.91□□□□□ -0.34
CCDC66-207ENST00000439445 C3orf67Q6ZVT6 689 aa12.91□□□□□ -0.34
CCDC66-207ENST00000439445 SLC51AQ86UW1 340 aa12.91□□□□□ -0.34
CCDC66-207ENST00000439445 NIM1KQ8IY84 436 aa12.91□□□□□ -0.34
CCDC66-207ENST00000439445 UTP14AQ9BVJ6 771 aaKnown RBP12.91□□□□□ -0.34
CCDC66-207ENST00000439445 PRDM10Q9NQV6 1147 aa12.91□□□□□ -0.34
CCDC66-207ENST00000439445 ABT1Q9ULW3 272 aaKnown RBP12.91□□□□□ -0.34
CCDC66-207ENST00000439445 ADAMTSL1Q8N6G6 1762 aa12.91□□□□□ -0.34
CCDC66-207ENST00000439445 COL4A5P29400 1685 aa12.9□□□□□ -0.34
CCDC66-207ENST00000439445 RASSF10A6NK89 507 aa12.9□□□□□ -0.34
CCDC66-207ENST00000439445 PPIP5K2O43314 1243 aa12.9□□□□□ -0.34
CCDC66-207ENST00000439445 ANXA1P04083 346 aa12.9□□□□□ -0.34
CCDC66-207ENST00000439445 SCNN1DP51172 638 aa12.9□□□□□ -0.34
CCDC66-207ENST00000439445 PDIA6Q15084 440 aa12.9□□□□□ -0.34
CCDC66-207ENST00000439445 SLC10A5Q5PT55 438 aa12.9□□□□□ -0.34
CCDC66-207ENST00000439445 NECTIN2Q92692 538 aa12.9□□□□□ -0.34
CCDC66-207ENST00000439445 SCUBE2Q9NQ36 999 aa12.9□□□□□ -0.34
CCDC66-207ENST00000439445 DDX21Q9NR30 783 aaKnown RBP eCLIP12.9□□□□□ -0.34
CCDC66-207ENST00000439445 WBP1LQ9NX94 342 aa12.9□□□□□ -0.34
CCDC66-207ENST00000439445 ATP6V0A2Q9Y487 856 aa12.9□□□□□ -0.34
CCDC66-207ENST00000439445 LBX1P52954 281 aa12.89□□□□□ -0.35
CCDC66-207ENST00000439445 AIMP1Q12904 312 aaKnown RBP12.89□□□□□ -0.35
CCDC66-207ENST00000439445 MKRN3Q13064 507 aaKnown RBP12.89□□□□□ -0.35
CCDC66-207ENST00000439445 AOC3Q16853 763 aa12.89□□□□□ -0.35
CCDC66-207ENST00000439445 PROSER3Q2NL68 480 aa12.89□□□□□ -0.35
CCDC66-207ENST00000439445 LRP10Q7Z4F1 713 aa12.89□□□□□ -0.35
CCDC66-207ENST00000439445 FMR1Q06787 632 aaKnown RBP eCLIP12.88□□□□□ -0.35
CCDC66-207ENST00000439445 USP50Q70EL3 339 aaPredicted RBP12.88□□□□□ -0.35
CCDC66-207ENST00000439445 COPS6Q7L5N1 327 aa12.88□□□□□ -0.35
CCDC66-207ENST00000439445 SUPT20HQ8NEM7 779 aa12.88□□□□□ -0.35
CCDC66-207ENST00000439445 VPS33BQ9H267 617 aa12.88□□□□□ -0.35
CCDC66-207ENST00000439445 BABAM1Q9NWV8 329 aa12.88□□□□□ -0.35
CCDC66-207ENST00000439445 WDR33Q9C0J8 1336 aaKnown RBP12.88□□□□□ -0.35
CCDC66-207ENST00000439445 BBOX1O75936 387 aa12.87□□□□□ -0.35
CCDC66-207ENST00000439445 HCLS1P14317 486 aaPredicted RBP12.87□□□□□ -0.35
CCDC66-207ENST00000439445 TMPOP42166 694 aaKnown RBP12.87□□□□□ -0.35
CCDC66-207ENST00000439445 MAP2K1Q02750 393 aaPredicted RBP12.87□□□□□ -0.35
CCDC66-207ENST00000439445 CXCL9Q07325 125 aa12.87□□□□□ -0.35
CCDC66-207ENST00000439445 LMOD3Q0VAK6 560 aa12.87□□□□□ -0.35
CCDC66-207ENST00000439445 NEUROD2Q15784 382 aa12.87□□□□□ -0.35
CCDC66-207ENST00000439445 HSP90AB3PQ58FF7 597 aa12.87□□□□□ -0.35
CCDC66-207ENST00000439445 PAXIP1Q6ZW49 1069 aaPredicted RBP12.87□□□□□ -0.35
CCDC66-207ENST00000439445 NLRP10Q86W26 655 aa12.87□□□□□ -0.35
CCDC66-207ENST00000439445 MPNDQ8N594 471 aa12.87□□□□□ -0.35
CCDC66-207ENST00000439445 OCEL1Q9H607 264 aa12.87□□□□□ -0.35
CCDC66-207ENST00000439445 TRMT112Q9UI30 125 aaKnown RBP12.87□□□□□ -0.35
CCDC66-207ENST00000439445 ZNRF3Q9ULT6 936 aa12.87□□□□□ -0.35
CCDC66-207ENST00000439445 LTBP1Q14766 1721 aa12.87□□□□□ -0.35
CCDC66-207ENST00000439445 ABCC4O15439 1325 aa12.87□□□□□ -0.35
CCDC66-207ENST00000439445 TRAF5O00463 557 aa12.86□□□□□ -0.35
CCDC66-207ENST00000439445 RIOK3O14730 519 aaKnown RBP12.86□□□□□ -0.35
CCDC66-207ENST00000439445 GRM1Q13255 1194 aa12.86□□□□□ -0.35
CCDC66-207ENST00000439445 DPP8Q6V1X1 898 aaPredicted RBP12.86□□□□□ -0.35
CCDC66-207ENST00000439445 DDX46Q7L014 1031 aaKnown RBP12.86□□□□□ -0.35
CCDC66-207ENST00000439445 SP8Q8IXZ3 490 aa12.86□□□□□ -0.35
CCDC66-207ENST00000439445 XAGE3Q8WTP9 111 aa12.86□□□□□ -0.35
CCDC66-207ENST00000439445 ADARB2Q9NS39 739 aaKnown RBP12.86□□□□□ -0.35
CCDC66-207ENST00000439445 GPRC5DQ9NZD1 345 aa12.86□□□□□ -0.35
CCDC66-207ENST00000439445 TCIRG1Q13488 830 aa12.85□□□□□ -0.35
CCDC66-207ENST00000439445 RALBP1Q15311 655 aa12.85□□□□□ -0.35
CCDC66-207ENST00000439445 CST9Q5W186 159 aa12.85□□□□□ -0.35
CCDC66-207ENST00000439445 ZNF428Q96B54 188 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms