RNA–Protein interactions for RNA: ENST00000436481.1

RHBDD1-206, Transcript of rhomboid domain containing 1, humanhuman

TSL 3

Gene RHBDD1, Length 777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD1-206ENST00000436481 TNRC6CQ9HCJ0 1690 aaKnown RBP16.2■□□□□ 0.18
RHBDD1-206ENST00000436481 ANKRD31Q8N7Z5 1873 aa16.2■□□□□ 0.18
RHBDD1-206ENST00000436481 KLRG2A4D1S0 409 aaPredicted RBP16.19■□□□□ 0.18
RHBDD1-206ENST00000436481 CSF1RP07333 972 aa16.19■□□□□ 0.18
RHBDD1-206ENST00000436481 SF3B3Q15393 1217 aaKnown RBP16.19■□□□□ 0.18
RHBDD1-206ENST00000436481 RABL6Q3YEC7 729 aaPredicted RBP16.19■□□□□ 0.18
RHBDD1-206ENST00000436481 CCDC152Q4G0S7 254 aa16.19■□□□□ 0.18
RHBDD1-206ENST00000436481 CCDC85AQ96PX6 553 aaPredicted RBP16.19■□□□□ 0.18
RHBDD1-206ENST00000436481 CHMP3Q9Y3E7 222 aa16.19■□□□□ 0.18
RHBDD1-206ENST00000436481 CRY2Q49AN0 593 aa16.18■□□□□ 0.18
RHBDD1-206ENST00000436481 GREM2Q9H772 168 aa16.18■□□□□ 0.18
RHBDD1-206ENST00000436481 PPP1R1BQ9UD71 204 aaPredicted RBP16.18■□□□□ 0.18
RHBDD1-206ENST00000436481 FAM161AQ3B820 660 aa16.17■□□□□ 0.18
RHBDD1-206ENST00000436481 CEP85Q6P2H3 762 aa16.17■□□□□ 0.18
RHBDD1-206ENST00000436481 KLHL34Q8N239 644 aa16.17■□□□□ 0.18
RHBDD1-206ENST00000436481 RPGRQ92834 1020 aaKnown RBP16.17■□□□□ 0.18
RHBDD1-206ENST00000436481 PCDHB15Q9Y5E8 787 aa16.17■□□□□ 0.18
RHBDD1-206ENST00000436481 CD2APQ9Y5K6 639 aa16.17■□□□□ 0.18
RHBDD1-206ENST00000436481 KIF13BQ9NQT8 1826 aa16.17■□□□□ 0.18
RHBDD1-206ENST00000436481 H0YIN7 160 aa16.16■□□□□ 0.18
RHBDD1-206ENST00000436481 SRGAP3O43295 1099 aa16.16■□□□□ 0.18
RHBDD1-206ENST00000436481 ATP8B2P98198 1209 aa16.16■□□□□ 0.18
RHBDD1-206ENST00000436481 MTX1Q13505 466 aa16.16■□□□□ 0.18
RHBDD1-206ENST00000436481 C2CD5Q86YS7 1000 aa16.16■□□□□ 0.18
RHBDD1-206ENST00000436481 RPAP2Q8IXW5 612 aaPredicted RBP16.16■□□□□ 0.18
RHBDD1-206ENST00000436481 PDZRN3Q9UPQ7 1066 aa16.16■□□□□ 0.18
RHBDD1-206ENST00000436481 RTL9Q8NET4 1388 aa16.15■□□□□ 0.18
RHBDD1-206ENST00000436481 PNMA6EA0A0J9YXQ4 647 aa16.15■□□□□ 0.18
RHBDD1-206ENST00000436481 SRGNP10124 158 aa16.15■□□□□ 0.18
RHBDD1-206ENST00000436481 ITGA6P23229 1130 aa16.15■□□□□ 0.18
RHBDD1-206ENST00000436481 TGFB2P61812 414 aa16.15■□□□□ 0.18
RHBDD1-206ENST00000436481 IFIT5Q13325 482 aaKnown RBP16.15■□□□□ 0.18
RHBDD1-206ENST00000436481 CCDC57Q2TAC2 916 aa16.15■□□□□ 0.18
RHBDD1-206ENST00000436481 DDX46Q7L014 1031 aaKnown RBP16.15■□□□□ 0.18
RHBDD1-206ENST00000436481 RBM17Q96I25 401 aaKnown RBP16.15■□□□□ 0.18
RHBDD1-206ENST00000436481 ANKRD18BA2A2Z9 1011 aa16.14■□□□□ 0.17
RHBDD1-206ENST00000436481 NPR1P16066 1061 aa16.14■□□□□ 0.17
RHBDD1-206ENST00000436481 CHRNA5P30532 468 aa16.14■□□□□ 0.17
RHBDD1-206ENST00000436481 HOXA10P31260 410 aaPredicted RBP16.14■□□□□ 0.17
RHBDD1-206ENST00000436481 SIRT2Q8IXJ6 389 aa16.14■□□□□ 0.17
RHBDD1-206ENST00000436481 MASTLQ96GX5 879 aa16.14■□□□□ 0.17
RHBDD1-206ENST00000436481 SEC31BQ9NQW1 1179 aa16.14■□□□□ 0.17
RHBDD1-206ENST00000436481 A0A0G2JLW4 131 aa16.13■□□□□ 0.17
RHBDD1-206ENST00000436481 HMMRO75330 724 aa16.13■□□□□ 0.17
RHBDD1-206ENST00000436481 DPEP1P16444 411 aa16.13■□□□□ 0.17
RHBDD1-206ENST00000436481 POLA2Q14181 598 aa16.13■□□□□ 0.17
RHBDD1-206ENST00000436481 ERICH6BQ5W0A0 696 aa16.13■□□□□ 0.17
RHBDD1-206ENST00000436481 SSH3Q8TE77 659 aa16.13■□□□□ 0.17
RHBDD1-206ENST00000436481 ZNF622Q969S3 477 aaKnown RBP eCLIP16.13■□□□□ 0.17
RHBDD1-206ENST00000436481 CDC5LQ99459 802 aaKnown RBP16.13■□□□□ 0.17
RHBDD1-206ENST00000436481 COL11A2P13942 1736 aaPredicted RBP16.13■□□□□ 0.17
RHBDD1-206ENST00000436481 GOLGB1Q14789 3259 aaKnown RBP16.13■□□□□ 0.17
RHBDD1-206ENST00000436481 RFX5P48382 616 aaPredicted RBP16.12■□□□□ 0.17
RHBDD1-206ENST00000436481 TAF7LQ5H9L4 462 aa16.12■□□□□ 0.17
RHBDD1-206ENST00000436481 STYK1Q6J9G0 422 aa16.12■□□□□ 0.17
RHBDD1-206ENST00000436481 CRAMP1Q96RY5 1269 aa16.12■□□□□ 0.17
RHBDD1-206ENST00000436481 FHDC1Q9C0D6 1143 aaPredicted RBP16.12■□□□□ 0.17
RHBDD1-206ENST00000436481 TAF1P21675 1872 aa16.12■□□□□ 0.17
RHBDD1-206ENST00000436481 KCNA3P22001 575 aa16.11■□□□□ 0.17
RHBDD1-206ENST00000436481 ALDH1B1P30837 517 aa16.11■□□□□ 0.17
RHBDD1-206ENST00000436481 GRAPQ13588 217 aa16.11■□□□□ 0.17
RHBDD1-206ENST00000436481 ANKRD18AQ8IVF6 992 aa16.11■□□□□ 0.17
RHBDD1-206ENST00000436481 GRAPLQ8TC17 118 aaPredicted RBP16.11■□□□□ 0.17
RHBDD1-206ENST00000436481 CELF1Q92879 486 aaKnown RBP16.11■□□□□ 0.17
RHBDD1-206ENST00000436481 ZNF594Q96JF6 807 aaPredicted RBP16.11■□□□□ 0.17
RHBDD1-206ENST00000436481 LRP5O75197 1615 aa16.1■□□□□ 0.17
RHBDD1-206ENST00000436481 IGHMBP2P38935 993 aaKnown RBP16.1■□□□□ 0.17
RHBDD1-206ENST00000436481 RPS8P62241 208 aaKnown RBP16.1■□□□□ 0.17
RHBDD1-206ENST00000436481 PTPN12Q05209 780 aaKnown RBP16.1■□□□□ 0.17
RHBDD1-206ENST00000436481 KLHDC4Q8TBB5 520 aa16.1■□□□□ 0.17
RHBDD1-206ENST00000436481 CNKSR1Q969H4 720 aa16.1■□□□□ 0.17
RHBDD1-206ENST00000436481 COPRSQ9NQ92 184 aa16.1■□□□□ 0.17
RHBDD1-206ENST00000436481 PA2G4Q9UQ80 394 aaKnown RBP16.1■□□□□ 0.17
RHBDD1-206ENST00000436481 KIAA1551Q9HCM1 1747 aa16.1■□□□□ 0.17
RHBDD1-206ENST00000436481 DLEC1Q9Y238 1755 aa16.09■□□□□ 0.17
RHBDD1-206ENST00000436481 BBOX1O75936 387 aa16.09■□□□□ 0.17
RHBDD1-206ENST00000436481 HDAC1Q13547 482 aaPredicted RBP16.09■□□□□ 0.17
RHBDD1-206ENST00000436481 NLGN2Q8NFZ4 835 aa16.09■□□□□ 0.17
RHBDD1-206ENST00000436481 MPHOSPH8Q99549 860 aa16.09■□□□□ 0.17
RHBDD1-206ENST00000436481 RWDD1Q9H446 243 aaPredicted RBP16.09■□□□□ 0.17
RHBDD1-206ENST00000436481 COL4A1P02462 1669 aa16.08■□□□□ 0.17
RHBDD1-206ENST00000436481 LDHAL6AQ6ZMR3 332 aa16.08■□□□□ 0.16
RHBDD1-206ENST00000436481 TTLL6Q8N841 843 aa16.08■□□□□ 0.16
RHBDD1-206ENST00000436481 SYT17Q9BSW7 474 aa16.08■□□□□ 0.16
RHBDD1-206ENST00000436481 SIL1Q9H173 461 aa16.08■□□□□ 0.16
RHBDD1-206ENST00000436481 PIM2Q9P1W9 311 aa16.08■□□□□ 0.16
RHBDD1-206ENST00000436481 PPEF1O14829 653 aaPredicted RBP16.07■□□□□ 0.16
RHBDD1-206ENST00000436481 SURF6O75683 361 aaKnown RBP16.07■□□□□ 0.16
RHBDD1-206ENST00000436481 PRPF40BQ6NWY9 871 aaKnown RBP16.07■□□□□ 0.16
RHBDD1-206ENST00000436481 PUS3Q9BZE2 481 aaKnown RBP16.07■□□□□ 0.16
RHBDD1-206ENST00000436481 CNNM1Q9NRU3 951 aa16.07■□□□□ 0.16
RHBDD1-206ENST00000436481 BSDC1Q9NW68 430 aaPredicted RBP16.07■□□□□ 0.16
RHBDD1-206ENST00000436481 SPEF2Q9C093 1822 aa16.07■□□□□ 0.16
RHBDD1-206ENST00000436481 CACNA1SQ13698 1873 aa16.06■□□□□ 0.16
RHBDD1-206ENST00000436481 EYA2O00167 538 aa16.06■□□□□ 0.16
RHBDD1-206ENST00000436481 IGHDP01880 384 aa16.06■□□□□ 0.16
RHBDD1-206ENST00000436481 G3BP1Q13283 466 aaKnown RBP eCLIP16.06■□□□□ 0.16
RHBDD1-206ENST00000436481 LRRC24Q50LG9 513 aa16.06■□□□□ 0.16
RHBDD1-206ENST00000436481 TMC4Q7Z404 712 aa16.06■□□□□ 0.16
RHBDD1-206ENST00000436481 PPP4R2Q9NY27 417 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms