RNA–Protein interactions for RNA: ENST00000434424.5

PTPRK-212, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 3

Gene PTPRK, Length 555 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-212ENST00000434424 RNF19AQ9NV58 838 aa10.84□□□□□ -0.67
PTPRK-212ENST00000434424 SMARCA5O60264 1052 aaPredicted RBP10.83□□□□□ -0.68
PTPRK-212ENST00000434424 MSX1P28360 303 aa10.83□□□□□ -0.68
PTPRK-212ENST00000434424 USP5P45974 858 aa10.83□□□□□ -0.68
PTPRK-212ENST00000434424 FANCCQ00597 558 aa10.83□□□□□ -0.68
PTPRK-212ENST00000434424 ENOX2Q16206 610 aaKnown RBP10.83□□□□□ -0.68
PTPRK-212ENST00000434424 SPATA32Q96LK8 384 aa10.83□□□□□ -0.68
PTPRK-212ENST00000434424 TGIF2Q9GZN2 237 aa10.83□□□□□ -0.68
PTPRK-212ENST00000434424 CDK2AP1O14519 115 aa10.82□□□□□ -0.68
PTPRK-212ENST00000434424 C2CD2LO14523 706 aa10.82□□□□□ -0.68
PTPRK-212ENST00000434424 ZBTB39O15060 712 aa10.82□□□□□ -0.68
PTPRK-212ENST00000434424 ATCAYQ86WG3 371 aa10.82□□□□□ -0.68
PTPRK-212ENST00000434424 GALNT6Q8NCL4 622 aa10.82□□□□□ -0.68
PTPRK-212ENST00000434424 NGLY1Q96IV0 654 aa10.82□□□□□ -0.68
PTPRK-212ENST00000434424 TANGO6Q9C0B7 1094 aa10.82□□□□□ -0.68
PTPRK-212ENST00000434424 CCSER2Q9H7U1 834 aa10.82□□□□□ -0.68
PTPRK-212ENST00000434424 POLIQ9UNA4 740 aa10.82□□□□□ -0.68
PTPRK-212ENST00000434424 PNMA6FA0A0J9YX94 578 aa10.81□□□□□ -0.68
PTPRK-212ENST00000434424 KRBA1A5PL33 1030 aa10.81□□□□□ -0.68
PTPRK-212ENST00000434424 HOXB4P17483 251 aaPredicted RBP10.81□□□□□ -0.68
PTPRK-212ENST00000434424 MZF1P28698 734 aaPredicted RBP10.81□□□□□ -0.68
PTPRK-212ENST00000434424 ZNF76P36508 570 aa10.81□□□□□ -0.68
PTPRK-212ENST00000434424 GNASQ5JWF2 1037 aa10.81□□□□□ -0.68
PTPRK-212ENST00000434424 TMEM214Q6NUQ4 689 aaKnown RBP10.81□□□□□ -0.68
PTPRK-212ENST00000434424 GJD3Q8N144 294 aa10.81□□□□□ -0.68
PTPRK-212ENST00000434424 SETDB2Q96T68 719 aa10.81□□□□□ -0.68
PTPRK-212ENST00000434424 NDFIP2Q9NV92 336 aa10.81□□□□□ -0.68
PTPRK-212ENST00000434424 COL8A1P27658 744 aa10.8□□□□□ -0.68
PTPRK-212ENST00000434424 DNM1Q05193 864 aaKnown RBP10.8□□□□□ -0.68
PTPRK-212ENST00000434424 LBRQ14739 615 aaKnown RBP10.8□□□□□ -0.68
PTPRK-212ENST00000434424 TLR1Q15399 786 aa10.8□□□□□ -0.68
PTPRK-212ENST00000434424 SLC43A3Q8NBI5 491 aa10.8□□□□□ -0.68
PTPRK-212ENST00000434424 PHF24Q9UPV7 400 aa10.8□□□□□ -0.68
PTPRK-212ENST00000434424 SERTM1A2A2V5 107 aa10.79□□□□□ -0.68
PTPRK-212ENST00000434424 C11orf91Q3C1V1 193 aa10.79□□□□□ -0.68
PTPRK-212ENST00000434424 POTEAQ6S8J7 498 aa10.79□□□□□ -0.68
PTPRK-212ENST00000434424 EDARADDQ8WWZ3 215 aa10.79□□□□□ -0.68
PTPRK-212ENST00000434424 TINF2Q9BSI4 451 aa10.79□□□□□ -0.68
PTPRK-212ENST00000434424 CAPN10Q9HC96 672 aa10.79□□□□□ -0.68
PTPRK-212ENST00000434424 SCRIBQ14160 1630 aa10.79□□□□□ -0.68
PTPRK-212ENST00000434424 GNA15P30679 374 aa10.78□□□□□ -0.68
PTPRK-212ENST00000434424 FAM26DQ5JW98 314 aa10.78□□□□□ -0.68
PTPRK-212ENST00000434424 PPARGC1BQ86YN6 1023 aaKnown RBP10.78□□□□□ -0.68
PTPRK-212ENST00000434424 EDEM1Q92611 657 aa10.78□□□□□ -0.68
PTPRK-212ENST00000434424 ABHD17AQ96GS6 310 aa10.78□□□□□ -0.68
PTPRK-212ENST00000434424 ATXN7L1Q9ULK2 861 aaPredicted RBP10.78□□□□□ -0.68
PTPRK-212ENST00000434424 CUX2O14529 1486 aa10.78□□□□□ -0.68
PTPRK-212ENST00000434424 BNIP3LO60238 219 aa10.77□□□□□ -0.69
PTPRK-212ENST00000434424 PDGFAP04085 211 aa10.77□□□□□ -0.69
PTPRK-212ENST00000434424 CTBSQ01459 385 aa10.77□□□□□ -0.69
PTPRK-212ENST00000434424 GNL2Q13823 731 aaKnown RBP10.77□□□□□ -0.69
PTPRK-212ENST00000434424 TEAD4Q15561 434 aa10.77□□□□□ -0.69
PTPRK-212ENST00000434424 ALDH16A1Q8IZ83 802 aa10.77□□□□□ -0.69
PTPRK-212ENST00000434424 RHBDD1Q8TEB9 315 aa10.77□□□□□ -0.69
PTPRK-212ENST00000434424 FBF1Q8TES7 1133 aa10.77□□□□□ -0.69
PTPRK-212ENST00000434424 GDF2Q9UK05 429 aaPredicted RBP10.77□□□□□ -0.69
PTPRK-212ENST00000434424 ZNF232Q9UNY5 417 aa10.77□□□□□ -0.69
PTPRK-212ENST00000434424 IQSEC3Q9UPP2 1182 aaPredicted RBP10.77□□□□□ -0.69
PTPRK-212ENST00000434424 USP3Q9Y6I4 520 aa10.77□□□□□ -0.69
PTPRK-212ENST00000434424 EML1O00423 815 aa10.76□□□□□ -0.69
PTPRK-212ENST00000434424 PCSK2P16519 638 aa10.76□□□□□ -0.69
PTPRK-212ENST00000434424 ZAP70P43403 619 aa10.76□□□□□ -0.69
PTPRK-212ENST00000434424 HIRAP54198 1017 aaPredicted RBP10.76□□□□□ -0.69
PTPRK-212ENST00000434424 DGKZQ13574 1117 aa10.76□□□□□ -0.69
PTPRK-212ENST00000434424 RTN1Q16799 776 aa10.76□□□□□ -0.69
PTPRK-212ENST00000434424 PGBD3Q8N328 593 aa10.76□□□□□ -0.69
PTPRK-212ENST00000434424 FRMD6Q96NE9 622 aa10.76□□□□□ -0.69
PTPRK-212ENST00000434424 CSRNP1Q96S65 589 aa10.76□□□□□ -0.69
PTPRK-212ENST00000434424 CRISPLD1Q9H336 500 aa10.76□□□□□ -0.69
PTPRK-212ENST00000434424 NLRP2Q9NX02 1062 aa10.76□□□□□ -0.69
PTPRK-212ENST00000434424 PRKAG2Q9UGJ0 569 aa10.76□□□□□ -0.69
PTPRK-212ENST00000434424 HCN2Q9UL51 889 aa10.76□□□□□ -0.69
PTPRK-212ENST00000434424 MKL2Q9ULH7 1088 aa10.76□□□□□ -0.69
PTPRK-212ENST00000434424 HCN4Q9Y3Q4 1203 aa10.76□□□□□ -0.69
PTPRK-212ENST00000434424 NOS2P35228 1153 aa10.75□□□□□ -0.69
PTPRK-212ENST00000434424 LINC00114Q6XXX2 140 aa10.75□□□□□ -0.69
PTPRK-212ENST00000434424 DPH6Q7L8W6 267 aa10.75□□□□□ -0.69
PTPRK-212ENST00000434424 ETFBKMTQ8IXQ9 262 aa10.75□□□□□ -0.69
PTPRK-212ENST00000434424 GOLGA6L1Q8N7Z2 621 aa10.75□□□□□ -0.69
PTPRK-212ENST00000434424 IFT43Q96FT9 208 aa10.75□□□□□ -0.69
PTPRK-212ENST00000434424 CABP1Q9NZU7 370 aa10.75□□□□□ -0.69
PTPRK-212ENST00000434424 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.75□□□□□ -0.69
PTPRK-212ENST00000434424 AK5Q9Y6K8 562 aa10.75□□□□□ -0.69
PTPRK-212ENST00000434424 DCAF1Q9Y4B6 1507 aa10.74□□□□□ -0.69
PTPRK-212ENST00000434424 NEFLP07196 543 aa10.74□□□□□ -0.69
PTPRK-212ENST00000434424 BMP4P12644 408 aa10.74□□□□□ -0.69
PTPRK-212ENST00000434424 ATP2B1P20020 1258 aa10.74□□□□□ -0.69
PTPRK-212ENST00000434424 FGFR3P22607 806 aa10.74□□□□□ -0.69
PTPRK-212ENST00000434424 GTF2E1P29083 439 aaPredicted RBP10.74□□□□□ -0.69
PTPRK-212ENST00000434424 EFHC2Q5JST6 749 aa10.74□□□□□ -0.69
PTPRK-212ENST00000434424 SH3PXD2AQ5TCZ1 1133 aa10.74□□□□□ -0.69
PTPRK-212ENST00000434424 ACBD3Q9H3P7 528 aa10.74□□□□□ -0.69
PTPRK-212ENST00000434424 SUV39H2Q9H5I1 410 aa10.74□□□□□ -0.69
PTPRK-212ENST00000434424 RRAGCQ9HB90 399 aa10.74□□□□□ -0.69
PTPRK-212ENST00000434424 GGA1Q9UJY5 639 aa10.74□□□□□ -0.69
PTPRK-212ENST00000434424 CADPSQ9ULU8 1353 aa10.74□□□□□ -0.69
PTPRK-212ENST00000434424 ERCC6Q03468 1493 aa10.74□□□□□ -0.69
PTPRK-212ENST00000434424 XP32Q5T750 250 aa10.73□□□□□ -0.69
PTPRK-212ENST00000434424 SLCO4C1Q6ZQN7 724 aa10.73□□□□□ -0.69
PTPRK-212ENST00000434424 TTC16Q8NEE8 873 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms