RNA–Protein interactions for RNA: ENST00000428130.6

RDH11-202, Transcript of retinol dehydrogenase 11, humanhuman

TSL 2 BASIC

Gene RDH11, Length 1,064 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-202ENST00000428130 PCGF6Q9BYE7 350 aa13.72□□□□□ -0.21
RDH11-202ENST00000428130 ZBTB3Q9H5J0 574 aa13.72□□□□□ -0.21
RDH11-202ENST00000428130 RNF216Q9NWF9 866 aaPredicted RBP13.72□□□□□ -0.21
RDH11-202ENST00000428130 HUNKP57058 714 aa13.71□□□□□ -0.21
RDH11-202ENST00000428130 CFAP53Q96M91 514 aa13.71□□□□□ -0.21
RDH11-202ENST00000428130 NLRP3Q96P20 1036 aa13.71□□□□□ -0.21
RDH11-202ENST00000428130 BCL2L13Q9BXK5 485 aa13.71□□□□□ -0.21
RDH11-202ENST00000428130 TMX4Q9H1E5 349 aaPredicted RBP13.71□□□□□ -0.21
RDH11-202ENST00000428130 RRP7AQ9Y3A4 280 aaKnown RBP13.71□□□□□ -0.21
RDH11-202ENST00000428130 SHTN1A0MZ66 631 aa13.7□□□□□ -0.22
RDH11-202ENST00000428130 FAM155AB1AL88 458 aaPredicted RBP13.7□□□□□ -0.22
RDH11-202ENST00000428130 RAD17O75943 681 aa13.7□□□□□ -0.22
RDH11-202ENST00000428130 U2AF1L5P0DN76 240 aaPredicted RBP13.7□□□□□ -0.22
RDH11-202ENST00000428130 MYL6BP14649 208 aa13.7□□□□□ -0.22
RDH11-202ENST00000428130 SOX10P56693 466 aa13.7□□□□□ -0.22
RDH11-202ENST00000428130 U2AF1Q01081 240 aaKnown RBP eCLIP13.7□□□□□ -0.22
RDH11-202ENST00000428130 KIAA2012Q0VF49 1180 aa13.7□□□□□ -0.22
RDH11-202ENST00000428130 DLK2Q6UY11 383 aa13.7□□□□□ -0.22
RDH11-202ENST00000428130 GIGYF2Q6Y7W6 1299 aaKnown RBP13.7□□□□□ -0.22
RDH11-202ENST00000428130 SAGE1Q9NXZ1 904 aa13.7□□□□□ -0.22
RDH11-202ENST00000428130 NUDCQ9Y266 331 aa13.7□□□□□ -0.22
RDH11-202ENST00000428130 YDJCA8MPS7 323 aa13.69□□□□□ -0.22
RDH11-202ENST00000428130 TNIP1Q15025 636 aa13.69□□□□□ -0.22
RDH11-202ENST00000428130 SLC10A5Q5PT55 438 aa13.69□□□□□ -0.22
RDH11-202ENST00000428130 DPP8Q6V1X1 898 aaPredicted RBP13.69□□□□□ -0.22
RDH11-202ENST00000428130 PPP1R42Q7Z4L9 355 aa13.69□□□□□ -0.22
RDH11-202ENST00000428130 USP48Q86UV5 1035 aa13.69□□□□□ -0.22
RDH11-202ENST00000428130 CNOT7Q9UIV1 285 aaKnown RBP13.69□□□□□ -0.22
RDH11-202ENST00000428130 EIF4A1P60842 406 aaKnown RBP13.68□□□□□ -0.22
RDH11-202ENST00000428130 PARP10Q53GL7 1025 aa13.68□□□□□ -0.22
RDH11-202ENST00000428130 RGMBQ6NW40 437 aa13.68□□□□□ -0.22
RDH11-202ENST00000428130 SP8Q8IXZ3 490 aa13.68□□□□□ -0.22
RDH11-202ENST00000428130 MPNDQ8N594 471 aa13.68□□□□□ -0.22
RDH11-202ENST00000428130 BBOX1O75936 387 aa13.67□□□□□ -0.22
RDH11-202ENST00000428130 PRPF38BQ5VTL8 546 aaKnown RBP13.67□□□□□ -0.22
RDH11-202ENST00000428130 MICALL2Q8IY33 904 aa13.67□□□□□ -0.22
RDH11-202ENST00000428130 PNISRQ8TF01 805 aaKnown RBP13.67□□□□□ -0.22
RDH11-202ENST00000428130 SCN9AQ15858 1988 aa13.67□□□□□ -0.22
RDH11-202ENST00000428130 PSME4Q14997 1843 aa13.67□□□□□ -0.22
RDH11-202ENST00000428130 ERBB4Q15303 1308 aa13.66□□□□□ -0.22
RDH11-202ENST00000428130 H7C1D1 291 aa13.66□□□□□ -0.22
RDH11-202ENST00000428130 KIF23Q02241 960 aaPredicted RBP13.66□□□□□ -0.22
RDH11-202ENST00000428130 UTP14AQ9BVJ6 771 aaKnown RBP13.66□□□□□ -0.22
RDH11-202ENST00000428130 GBA2Q9HCG7 927 aaPredicted RBP13.66□□□□□ -0.22
RDH11-202ENST00000428130 RNF186Q9NXI6 227 aa13.66□□□□□ -0.22
RDH11-202ENST00000428130 TRPA1O75762 1119 aa13.65□□□□□ -0.22
RDH11-202ENST00000428130 EGFRP00533 1210 aa13.65□□□□□ -0.22
RDH11-202ENST00000428130 SAMD7Q7Z3H4 446 aa13.65□□□□□ -0.22
RDH11-202ENST00000428130 LRP10Q7Z4F1 713 aa13.65□□□□□ -0.22
RDH11-202ENST00000428130 DPF2Q92785 391 aa13.65□□□□□ -0.22
RDH11-202ENST00000428130 CCDC102AQ96A19 550 aa13.65□□□□□ -0.22
RDH11-202ENST00000428130 ZBTB12Q9Y330 459 aaPredicted RBP13.65□□□□□ -0.22
RDH11-202ENST00000428130 COL4A1P02462 1669 aa13.64□□□□□ -0.23
RDH11-202ENST00000428130 ZNF157P51786 506 aaPredicted RBP13.64□□□□□ -0.23
RDH11-202ENST00000428130 KRT26Q7Z3Y9 468 aa13.64□□□□□ -0.23
RDH11-202ENST00000428130 C2orf69Q8N8R5 385 aa13.64□□□□□ -0.23
RDH11-202ENST00000428130 ADM5C9JUS6 153 aa13.63□□□□□ -0.23
RDH11-202ENST00000428130 PSMD14O00487 310 aa13.63□□□□□ -0.23
RDH11-202ENST00000428130 SLC10A3P09131 477 aa13.63□□□□□ -0.23
RDH11-202ENST00000428130 PPP2R1AP30153 589 aa13.63□□□□□ -0.23
RDH11-202ENST00000428130 GRAPQ13588 217 aa13.63□□□□□ -0.23
RDH11-202ENST00000428130 PDIA6Q15084 440 aa13.63□□□□□ -0.23
RDH11-202ENST00000428130 TBC1D10BQ4KMP7 808 aaPredicted RBP13.63□□□□□ -0.23
RDH11-202ENST00000428130 CTU1Q7Z7A3 348 aaKnown RBP13.63□□□□□ -0.23
RDH11-202ENST00000428130 GRAPLQ8TC17 118 aaPredicted RBP13.63□□□□□ -0.23
RDH11-202ENST00000428130 THUMPD2Q9BTF0 503 aaKnown RBP13.63□□□□□ -0.23
RDH11-202ENST00000428130 MKI67P46013 3256 aaKnown RBP13.62□□□□□ -0.23
RDH11-202ENST00000428130 HCLS1P14317 486 aaPredicted RBP13.62□□□□□ -0.23
RDH11-202ENST00000428130 DDX46Q7L014 1031 aaKnown RBP13.62□□□□□ -0.23
RDH11-202ENST00000428130 CSRNP1Q96S65 589 aa13.62□□□□□ -0.23
RDH11-202ENST00000428130 PAPPA2Q9BXP8 1791 aa13.62□□□□□ -0.23
RDH11-202ENST00000428130 TMC4Q7Z404 712 aa13.61□□□□□ -0.23
RDH11-202ENST00000428130 NLRP10Q86W26 655 aa13.61□□□□□ -0.23
RDH11-202ENST00000428130 DCPSQ96C86 337 aaKnown RBP13.61□□□□□ -0.23
RDH11-202ENST00000428130 DBNDD1Q9H9R9 158 aa13.61□□□□□ -0.23
RDH11-202ENST00000428130 HTTP42858 3142 aa13.61□□□□□ -0.23
RDH11-202ENST00000428130 RTL9Q8NET4 1388 aa13.6□□□□□ -0.23
RDH11-202ENST00000428130 ANXA1P04083 346 aa13.6□□□□□ -0.23
RDH11-202ENST00000428130 RPS12P25398 132 aaKnown RBP13.6□□□□□ -0.23
RDH11-202ENST00000428130 CENPFP49454 3210 aa13.6□□□□□ -0.23
RDH11-202ENST00000428130 WASHC4Q2M389 1173 aa13.6□□□□□ -0.23
RDH11-202ENST00000428130 PROSER3Q2NL68 480 aa13.6□□□□□ -0.23
RDH11-202ENST00000428130 HPS5Q9UPZ3 1129 aa13.6□□□□□ -0.23
RDH11-202ENST00000428130 HSP90AB3PQ58FF7 597 aa13.59□□□□□ -0.23
RDH11-202ENST00000428130 RBM26Q5T8P6 1007 aaKnown RBP13.59□□□□□ -0.23
RDH11-202ENST00000428130 RASAL3Q86YV0 1011 aa13.59□□□□□ -0.23
RDH11-202ENST00000428130 KCNQ5Q9NR82 932 aa13.59□□□□□ -0.23
RDH11-202ENST00000428130 TRMT112Q9UI30 125 aaKnown RBP13.59□□□□□ -0.23
RDH11-202ENST00000428130 SH3TC1Q8TE82 1336 aa13.59□□□□□ -0.23
RDH11-202ENST00000428130 RIMBP2O15034 1052 aa13.58□□□□□ -0.24
RDH11-202ENST00000428130 ECE2O60344 883 aa13.58□□□□□ -0.24
RDH11-202ENST00000428130 EIF2S2P20042 333 aaKnown RBP13.58□□□□□ -0.24
RDH11-202ENST00000428130 NFE2L2Q16236 605 aa13.58□□□□□ -0.24
RDH11-202ENST00000428130 KIF4BQ2VIQ3 1234 aa13.58□□□□□ -0.24
RDH11-202ENST00000428130 REM2Q8IYK8 340 aaPredicted RBP13.58□□□□□ -0.24
RDH11-202ENST00000428130 CDCA5Q96FF9 252 aa13.58□□□□□ -0.24
RDH11-202ENST00000428130 PLEKHF1Q96S99 279 aa13.58□□□□□ -0.24
RDH11-202ENST00000428130 RNF39Q9H2S5 420 aa13.58□□□□□ -0.24
RDH11-202ENST00000428130 GGA3Q9NZ52 723 aa13.58□□□□□ -0.24
RDH11-202ENST00000428130 ASTN2O75129 1339 aaPredicted RBP13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms