RNA–Protein interactions for RNA: ENST00000428128.1

RGPD1-203, Transcript of RANBP2-like and GRIP domain containing 1, humanhuman

TSL 1 (best)

Gene RGPD1, Length 3,479 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD1-203ENST00000428128 CLTCL1P53675 1640 aa4.05□□□□□ -1.76
RGPD1-203ENST00000428128 ARFGEF1Q9Y6D6 1849 aa4.05□□□□□ -1.76
RGPD1-203ENST00000428128 RPGRIP1LQ68CZ1 1315 aa4.05□□□□□ -1.76
RGPD1-203ENST00000428128 PKD1L3Q7Z443 1732 aa4.05□□□□□ -1.76
RGPD1-203ENST00000428128 GRXCR2A6NFK2 248 aa4.05□□□□□ -1.76
RGPD1-203ENST00000428128 ATMINO43313 823 aaPredicted RBP4.05□□□□□ -1.76
RGPD1-203ENST00000428128 EN1Q05925 392 aaPredicted RBP4.05□□□□□ -1.76
RGPD1-203ENST00000428128 CSPP1Q1MSJ5 1256 aa4.05□□□□□ -1.76
RGPD1-203ENST00000428128 JMYQ8N9B5 988 aa4.05□□□□□ -1.76
RGPD1-203ENST00000428128 RASGRP4Q8TDF6 673 aa4.05□□□□□ -1.76
RGPD1-203ENST00000428128 TTC14Q96N46 770 aa4.05□□□□□ -1.76
RGPD1-203ENST00000428128 CABP2Q9NPB3 220 aa4.05□□□□□ -1.76
RGPD1-203ENST00000428128 UTP3Q9NQZ2 479 aaKnown RBP eCLIP4.05□□□□□ -1.76
RGPD1-203ENST00000428128 CCDC144AA2RUR9 1427 aa4.04□□□□□ -1.76
RGPD1-203ENST00000428128 EPB41L2O43491 1005 aaKnown RBP4.04□□□□□ -1.76
RGPD1-203ENST00000428128 TOM1O60784 492 aa4.04□□□□□ -1.76
RGPD1-203ENST00000428128 PRPF40AO75400 957 aaKnown RBP4.04□□□□□ -1.76
RGPD1-203ENST00000428128 EXOSC10Q01780 885 aaKnown RBP4.04□□□□□ -1.76
RGPD1-203ENST00000428128 ARID5AQ03989 594 aa4.04□□□□□ -1.76
RGPD1-203ENST00000428128 MORC3Q14149 939 aa4.04□□□□□ -1.76
RGPD1-203ENST00000428128 CITED4Q96RK1 184 aa4.04□□□□□ -1.76
RGPD1-203ENST00000428128 TSPAN18Q96SJ8 248 aa4.04□□□□□ -1.76
RGPD1-203ENST00000428128 PRKD2Q9BZL6 878 aa4.04□□□□□ -1.76
RGPD1-203ENST00000428128 HMX1Q9NP08 348 aaPredicted RBP4.04□□□□□ -1.76
RGPD1-203ENST00000428128 PARD3Q8TEW0 1356 aa4.04□□□□□ -1.76
RGPD1-203ENST00000428128 C4AP0C0L4 1744 aa4.04□□□□□ -1.76
RGPD1-203ENST00000428128 C4BP0C0L5 1744 aa4.04□□□□□ -1.76
RGPD1-203ENST00000428128 CCDC163A0A0D9SF12 145 aa4.04□□□□□ -1.76
RGPD1-203ENST00000428128 ZRANB2O95218 330 aaKnown RBP eCLIP4.04□□□□□ -1.76
RGPD1-203ENST00000428128 NDUFV2P19404 249 aa4.04□□□□□ -1.76
RGPD1-203ENST00000428128 KRT77Q7Z794 578 aa4.04□□□□□ -1.76
RGPD1-203ENST00000428128 CCSER2Q9H7U1 834 aa4.04□□□□□ -1.76
RGPD1-203ENST00000428128 CXXC1Q9P0U4 656 aaPredicted RBP4.04□□□□□ -1.76
RGPD1-203ENST00000428128 SF3B2Q13435 895 aaKnown RBP4.04□□□□□ -1.76
RGPD1-203ENST00000428128 GNL2Q13823 731 aaKnown RBP4.04□□□□□ -1.76
RGPD1-203ENST00000428128 CDCA8Q53HL2 280 aa4.04□□□□□ -1.76
RGPD1-203ENST00000428128 ICE2Q659A1 982 aa4.04□□□□□ -1.76
RGPD1-203ENST00000428128 IPO4Q8TEX9 1081 aaKnown RBP4.04□□□□□ -1.76
RGPD1-203ENST00000428128 TSC1Q92574 1164 aa4.04□□□□□ -1.76
RGPD1-203ENST00000428128 RBM33Q96EV2 1170 aaKnown RBP4.04□□□□□ -1.76
RGPD1-203ENST00000428128 IER2Q9BTL4 223 aa4.04□□□□□ -1.76
RGPD1-203ENST00000428128 TSPYL2Q9H2G4 693 aaPredicted RBP4.04□□□□□ -1.76
RGPD1-203ENST00000428128 CNTN3Q9P232 1028 aa4.04□□□□□ -1.76
RGPD1-203ENST00000428128 IQSEC3Q9UPP2 1182 aaPredicted RBP4.04□□□□□ -1.76
RGPD1-203ENST00000428128 PXDNQ92626 1479 aa4.03□□□□□ -1.76
RGPD1-203ENST00000428128 POTECB2RU33 542 aa4.03□□□□□ -1.76
RGPD1-203ENST00000428128 HSP90AA1P07900 732 aaKnown RBP4.03□□□□□ -1.76
RGPD1-203ENST00000428128 CD53P19397 219 aa4.03□□□□□ -1.76
RGPD1-203ENST00000428128 GTF2F1P35269 517 aaKnown RBP eCLIP4.03□□□□□ -1.76
RGPD1-203ENST00000428128 CBLBQ13191 982 aa4.03□□□□□ -1.76
RGPD1-203ENST00000428128 TBC1D10BQ4KMP7 808 aaPredicted RBP4.03□□□□□ -1.76
RGPD1-203ENST00000428128 CRTC2Q53ET0 693 aaPredicted RBP4.03□□□□□ -1.76
RGPD1-203ENST00000428128 PHTF2Q8N3S3 785 aa4.03□□□□□ -1.76
RGPD1-203ENST00000428128 CXorf38Q8TB03 319 aa4.03□□□□□ -1.76
RGPD1-203ENST00000428128 ATXN2LQ8WWM7 1075 aaKnown RBP4.03□□□□□ -1.76
RGPD1-203ENST00000428128 CAPN10Q9HC96 672 aa4.03□□□□□ -1.76
RGPD1-203ENST00000428128 MAP3K20Q9NYL2 800 aaKnown RBP4.03□□□□□ -1.76
RGPD1-203ENST00000428128 SIRPGQ9P1W8 387 aa4.03□□□□□ -1.76
RGPD1-203ENST00000428128 SPATA31A6Q5VVP1 1343 aa4.03□□□□□ -1.76
RGPD1-203ENST00000428128 PLEKHG1Q9ULL1 1385 aa4.03□□□□□ -1.76
RGPD1-203ENST00000428128 ADAMTS7Q9UKP4 1686 aa4.03□□□□□ -1.76
RGPD1-203ENST00000428128 CCDC189A1A4V9 331 aa4.03□□□□□ -1.76
RGPD1-203ENST00000428128 USP17L3A6NCW0 530 aa4.03□□□□□ -1.76
RGPD1-203ENST00000428128 USP17L4A6NCW7 530 aa4.03□□□□□ -1.76
RGPD1-203ENST00000428128 USP17L2Q6R6M4 530 aa4.03□□□□□ -1.76
RGPD1-203ENST00000428128 USP17L1Q7RTZ2 530 aa4.03□□□□□ -1.76
RGPD1-203ENST00000428128 IFNL1Q8IU54 200 aa4.03□□□□□ -1.76
RGPD1-203ENST00000428128 ZNF654Q8IZM8 581 aa4.03□□□□□ -1.76
RGPD1-203ENST00000428128 LSM14AQ8ND56 463 aaKnown RBP4.03□□□□□ -1.76
RGPD1-203ENST00000428128 MRFAP1L1Q96HT8 127 aa4.03□□□□□ -1.76
RGPD1-203ENST00000428128 TMEM121BQ9BXQ6 578 aaPredicted RBP4.03□□□□□ -1.76
RGPD1-203ENST00000428128 LGR6Q9HBX8 967 aa4.03□□□□□ -1.76
RGPD1-203ENST00000428128 KLRG2A4D1S0 409 aaPredicted RBP4.02□□□□□ -1.77
RGPD1-203ENST00000428128 POTEFA5A3E0 1075 aa4.02□□□□□ -1.77
RGPD1-203ENST00000428128 TIMM44O43615 452 aa4.02□□□□□ -1.77
RGPD1-203ENST00000428128 CAND2O75155 1236 aa4.02□□□□□ -1.77
RGPD1-203ENST00000428128 NR1I2O75469 434 aa4.02□□□□□ -1.77
RGPD1-203ENST00000428128 AP1G2O75843 785 aa4.02□□□□□ -1.77
RGPD1-203ENST00000428128 TTC39BQ5VTQ0 682 aaPredicted RBP4.02□□□□□ -1.77
RGPD1-203ENST00000428128 SIX5Q8N196 739 aa4.02□□□□□ -1.77
RGPD1-203ENST00000428128 FAM200AQ8TCP9 573 aa4.02□□□□□ -1.77
RGPD1-203ENST00000428128 SERINC2Q96SA4 455 aa4.02□□□□□ -1.77
RGPD1-203ENST00000428128 SCAPERQ9BY12 1400 aa4.02□□□□□ -1.77
RGPD1-203ENST00000428128 PRMT3O60678 531 aa4.02□□□□□ -1.77
RGPD1-203ENST00000428128 WDHD1O75717 1129 aaPredicted RBP4.02□□□□□ -1.77
RGPD1-203ENST00000428128 MAPK1P28482 360 aa4.02□□□□□ -1.77
RGPD1-203ENST00000428128 RBM10P98175 930 aaKnown RBP4.02□□□□□ -1.77
RGPD1-203ENST00000428128 SEMA3FQ13275 785 aa4.02□□□□□ -1.77
RGPD1-203ENST00000428128 C9orf131Q5VYM1 1079 aa4.02□□□□□ -1.77
RGPD1-203ENST00000428128 ANKMY2Q8IV38 441 aa4.02□□□□□ -1.77
RGPD1-203ENST00000428128 FAM9BQ8IZU0 186 aa4.02□□□□□ -1.77
RGPD1-203ENST00000428128 NKAIN3Q8N8D7 197 aa4.02□□□□□ -1.77
RGPD1-203ENST00000428128 CAMKK2Q96RR4 588 aa4.02□□□□□ -1.77
RGPD1-203ENST00000428128 ARNT2Q9HBZ2 717 aa4.02□□□□□ -1.77
RGPD1-203ENST00000428128 MSRB2Q9Y3D2 182 aa4.02□□□□□ -1.77
RGPD1-203ENST00000428128 KIF4AO95239 1232 aa4.02□□□□□ -1.77
RGPD1-203ENST00000428128 KRT72Q14CN4 511 aa4.02□□□□□ -1.77
RGPD1-203ENST00000428128 IER5LQ5T953 404 aa4.02□□□□□ -1.77
RGPD1-203ENST00000428128 POTEAQ6S8J7 498 aa4.02□□□□□ -1.77
RGPD1-203ENST00000428128 PPM1EQ8WY54 764 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms