RNA–Protein interactions for RNA: ENST00000426196.5

HDAC6-206, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-206ENST00000426196 USP48Q86UV5 1035 aa18.87■□□□□ 0.61
HDAC6-206ENST00000426196 CNOT7Q9UIV1 285 aaKnown RBP18.87■□□□□ 0.61
HDAC6-206ENST00000426196 KDM3BQ7LBC6 1761 aa18.86■□□□□ 0.61
HDAC6-206ENST00000426196 ABCC4O15439 1325 aa18.86■□□□□ 0.61
HDAC6-206ENST00000426196 PARP10Q53GL7 1025 aa18.86■□□□□ 0.61
HDAC6-206ENST00000426196 ZNF34Q8IZ26 560 aa18.86■□□□□ 0.61
HDAC6-206ENST00000426196 MPNDQ8N594 471 aa18.86■□□□□ 0.61
HDAC6-206ENST00000426196 CCDC102AQ96A19 550 aa18.86■□□□□ 0.61
HDAC6-206ENST00000426196 FAM155AB1AL88 458 aaPredicted RBP18.85■□□□□ 0.61
HDAC6-206ENST00000426196 U2AF1L5P0DN76 240 aaPredicted RBP18.85■□□□□ 0.61
HDAC6-206ENST00000426196 MYL6BP14649 208 aa18.85■□□□□ 0.61
HDAC6-206ENST00000426196 U2AF1Q01081 240 aaKnown RBP eCLIP18.85■□□□□ 0.61
HDAC6-206ENST00000426196 MICALL2Q8IY33 904 aa18.85■□□□□ 0.61
HDAC6-206ENST00000426196 C2orf69Q8N8R5 385 aa18.85■□□□□ 0.61
HDAC6-206ENST00000426196 GBA2Q9HCG7 927 aaPredicted RBP18.85■□□□□ 0.61
HDAC6-206ENST00000426196 MIS18AQ9NYP9 233 aa18.85■□□□□ 0.61
HDAC6-206ENST00000426196 LAMB2P55268 1798 aa18.85■□□□□ 0.61
HDAC6-206ENST00000426196 ANKRD36CQ5JPF3 1778 aa18.85■□□□□ 0.61
HDAC6-206ENST00000426196 TRPA1O75762 1119 aa18.84■□□□□ 0.61
HDAC6-206ENST00000426196 BBOX1O75936 387 aa18.84■□□□□ 0.61
HDAC6-206ENST00000426196 ZNF157P51786 506 aaPredicted RBP18.84■□□□□ 0.61
HDAC6-206ENST00000426196 KIF23Q02241 960 aaPredicted RBP18.84■□□□□ 0.61
HDAC6-206ENST00000426196 GIGYF2Q6Y7W6 1299 aaKnown RBP18.84■□□□□ 0.61
HDAC6-206ENST00000426196 KRT26Q7Z3Y9 468 aa18.84■□□□□ 0.61
HDAC6-206ENST00000426196 PNISRQ8TF01 805 aaKnown RBP18.84■□□□□ 0.61
HDAC6-206ENST00000426196 RNF186Q9NXI6 227 aa18.84■□□□□ 0.61
HDAC6-206ENST00000426196 CTU1Q7Z7A3 348 aaKnown RBP18.83■□□□□ 0.6
HDAC6-206ENST00000426196 SP8Q8IXZ3 490 aa18.83■□□□□ 0.6
HDAC6-206ENST00000426196 PCGF6Q9BYE7 350 aa18.83■□□□□ 0.6
HDAC6-206ENST00000426196 DLG5Q8TDM6 1919 aa18.82■□□□□ 0.6
HDAC6-206ENST00000426196 SHTN1A0MZ66 631 aa18.82■□□□□ 0.6
HDAC6-206ENST00000426196 DPF2Q92785 391 aa18.82■□□□□ 0.6
HDAC6-206ENST00000426196 UTP14AQ9BVJ6 771 aaKnown RBP18.82■□□□□ 0.6
HDAC6-206ENST00000426196 SLC10A5Q5PT55 438 aa18.81■□□□□ 0.6
HDAC6-206ENST00000426196 YDJCA8MPS7 323 aa18.8■□□□□ 0.6
HDAC6-206ENST00000426196 DLK2Q6UY11 383 aa18.8■□□□□ 0.6
HDAC6-206ENST00000426196 SAMD7Q7Z3H4 446 aa18.8■□□□□ 0.6
HDAC6-206ENST00000426196 DCPSQ96C86 337 aaKnown RBP18.8■□□□□ 0.6
HDAC6-206ENST00000426196 TAF1P21675 1872 aa18.8■□□□□ 0.6
HDAC6-206ENST00000426196 ERBB4Q15303 1308 aa18.79■□□□□ 0.6
HDAC6-206ENST00000426196 EIF4A1P60842 406 aaKnown RBP18.79■□□□□ 0.6
HDAC6-206ENST00000426196 TBC1D10BQ4KMP7 808 aaPredicted RBP18.79■□□□□ 0.6
HDAC6-206ENST00000426196 DDX46Q7L014 1031 aaKnown RBP18.79■□□□□ 0.6
HDAC6-206ENST00000426196 ZBTB12Q9Y330 459 aaPredicted RBP18.79■□□□□ 0.6
HDAC6-206ENST00000426196 LRRC37AA6NMS7 1700 aa18.78■□□□□ 0.6
HDAC6-206ENST00000426196 DUOX1Q9NRD9 1551 aa18.78■□□□□ 0.6
HDAC6-206ENST00000426196 ADM5C9JUS6 153 aa18.78■□□□□ 0.6
HDAC6-206ENST00000426196 SLC10A3P09131 477 aa18.78■□□□□ 0.6
HDAC6-206ENST00000426196 REM2Q8IYK8 340 aaPredicted RBP18.78■□□□□ 0.6
HDAC6-206ENST00000426196 DDX60Q8IY21 1712 aaKnown RBP18.77■□□□□ 0.6
HDAC6-206ENST00000426196 MKI67P46013 3256 aaKnown RBP18.77■□□□□ 0.6
HDAC6-206ENST00000426196 PSMD14O00487 310 aa18.77■□□□□ 0.6
HDAC6-206ENST00000426196 NEFMP07197 916 aa18.77■□□□□ 0.6
HDAC6-206ENST00000426196 RPS12P25398 132 aaKnown RBP18.77■□□□□ 0.6
HDAC6-206ENST00000426196 GRAPQ13588 217 aa18.77■□□□□ 0.6
HDAC6-206ENST00000426196 TMC4Q7Z404 712 aa18.77■□□□□ 0.6
HDAC6-206ENST00000426196 GRAPLQ8TC17 118 aaPredicted RBP18.77■□□□□ 0.6
HDAC6-206ENST00000426196 CSRNP1Q96S65 589 aa18.77■□□□□ 0.6
HDAC6-206ENST00000426196 HPS5Q9UPZ3 1129 aa18.77■□□□□ 0.6
HDAC6-206ENST00000426196 PKN2Q16513 984 aaKnown RBP18.76■□□□□ 0.59
HDAC6-206ENST00000426196 SULF1Q8IWU6 871 aa18.76■□□□□ 0.59
HDAC6-206ENST00000426196 GCC1Q96CN9 775 aa18.76■□□□□ 0.59
HDAC6-206ENST00000426196 HCLS1P14317 486 aaPredicted RBP18.75■□□□□ 0.59
HDAC6-206ENST00000426196 WASHC4Q2M389 1173 aa18.75■□□□□ 0.59
HDAC6-206ENST00000426196 RBM26Q5T8P6 1007 aaKnown RBP18.75■□□□□ 0.59
HDAC6-206ENST00000426196 EGFRP00533 1210 aa18.74■□□□□ 0.59
HDAC6-206ENST00000426196 HSP90AB3PQ58FF7 597 aa18.74■□□□□ 0.59
HDAC6-206ENST00000426196 DBNDD1Q9H9R9 158 aa18.74■□□□□ 0.59
HDAC6-206ENST00000426196 HDAC9Q9UKV0 1011 aa18.74■□□□□ 0.59
HDAC6-206ENST00000426196 KIF4BQ2VIQ3 1234 aa18.73■□□□□ 0.59
HDAC6-206ENST00000426196 GGA3Q9NZ52 723 aa18.73■□□□□ 0.59
HDAC6-206ENST00000426196 RASAL3Q86YV0 1011 aa18.72■□□□□ 0.59
HDAC6-206ENST00000426196 THUMPD2Q9BTF0 503 aaKnown RBP18.72■□□□□ 0.59
HDAC6-206ENST00000426196 SH3TC1Q8TE82 1336 aa18.72■□□□□ 0.59
HDAC6-206ENST00000426196 PAPPA2Q9BXP8 1791 aa18.71■□□□□ 0.59
HDAC6-206ENST00000426196 NLRP10Q86W26 655 aa18.71■□□□□ 0.59
HDAC6-206ENST00000426196 CDCA5Q96FF9 252 aa18.71■□□□□ 0.59
HDAC6-206ENST00000426196 TRMT112Q9UI30 125 aaKnown RBP18.71■□□□□ 0.59
HDAC6-206ENST00000426196 NSFL1CQ9UNZ2 370 aaKnown RBP18.71■□□□□ 0.59
HDAC6-206ENST00000426196 C6orf229H3BNL8 230 aa18.7■□□□□ 0.58
HDAC6-206ENST00000426196 RIMBP2O15034 1052 aa18.7■□□□□ 0.58
HDAC6-206ENST00000426196 ECE2O60344 883 aa18.7■□□□□ 0.58
HDAC6-206ENST00000426196 LRP10Q7Z4F1 713 aa18.7■□□□□ 0.58
HDAC6-206ENST00000426196 CENPFP49454 3210 aa18.7■□□□□ 0.58
HDAC6-206ENST00000426196 SCN9AQ15858 1988 aa18.7■□□□□ 0.58
HDAC6-206ENST00000426196 EIF2S2P20042 333 aaKnown RBP18.69■□□□□ 0.58
HDAC6-206ENST00000426196 PPP2R1AP30153 589 aa18.69■□□□□ 0.58
HDAC6-206ENST00000426196 FKBP1BP68106 108 aa18.69■□□□□ 0.58
HDAC6-206ENST00000426196 EYA3Q99504 573 aa18.69■□□□□ 0.58
HDAC6-206ENST00000426196 RTL9Q8NET4 1388 aa18.68■□□□□ 0.58
HDAC6-206ENST00000426196 PDIA6Q15084 440 aa18.68■□□□□ 0.58
HDAC6-206ENST00000426196 ZNF296Q8WUU4 475 aaPredicted RBP18.68■□□□□ 0.58
HDAC6-206ENST00000426196 HTTP42858 3142 aa18.67■□□□□ 0.58
HDAC6-206ENST00000426196 DOK7Q18PE1 504 aa18.67■□□□□ 0.58
HDAC6-206ENST00000426196 PROSER3Q2NL68 480 aa18.67■□□□□ 0.58
HDAC6-206ENST00000426196 POLLQ9UGP5 575 aa18.67■□□□□ 0.58
HDAC6-206ENST00000426196 TSPYL4Q9UJ04 414 aa18.67■□□□□ 0.58
HDAC6-206ENST00000426196 ANXA1P04083 346 aa18.66■□□□□ 0.58
HDAC6-206ENST00000426196 TCIRG1Q13488 830 aa18.66■□□□□ 0.58
HDAC6-206ENST00000426196 NFE2L2Q16236 605 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms