RNA–Protein interactions for RNA: ENST00000425516.1

CHCHD3P1-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3 pseudogene 1, humanhuman

BASIC

Gene CHCHD3P1, Length 676 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3P1-201ENST00000425516 A0A087WZG4 1122 aa9.06□□□□□ -0.96
CHCHD3P1-201ENST00000425516 PHF14O94880 888 aa9.06□□□□□ -0.96
CHCHD3P1-201ENST00000425516 GYS1P13807 737 aa9.06□□□□□ -0.96
CHCHD3P1-201ENST00000425516 BRPF1P55201 1214 aaPredicted RBP9.06□□□□□ -0.96
CHCHD3P1-201ENST00000425516 COPS6Q7L5N1 327 aa9.06□□□□□ -0.96
CHCHD3P1-201ENST00000425516 DZIP3Q86Y13 1208 aaKnown RBP9.06□□□□□ -0.96
CHCHD3P1-201ENST00000425516 SLC16A10Q8TF71 515 aa9.06□□□□□ -0.96
CHCHD3P1-201ENST00000425516 XAGE3Q8WTP9 111 aa9.06□□□□□ -0.96
CHCHD3P1-201ENST00000425516 SRP68Q9UHB9 627 aaKnown RBP9.06□□□□□ -0.96
CHCHD3P1-201ENST00000425516 TBC1D2BQ9UPU7 963 aa9.06□□□□□ -0.96
CHCHD3P1-201ENST00000425516 MAP3K15Q6ZN16 1313 aa9.05□□□□□ -0.96
CHCHD3P1-201ENST00000425516 CASZ1Q86V15 1759 aa9.05□□□□□ -0.96
CHCHD3P1-201ENST00000425516 ERVV-1B6SEH8 477 aa9.05□□□□□ -0.96
CHCHD3P1-201ENST00000425516 COL9A1P20849 921 aa9.05□□□□□ -0.96
CHCHD3P1-201ENST00000425516 RFC4P35249 363 aa9.05□□□□□ -0.96
CHCHD3P1-201ENST00000425516 HLFQ16534 295 aa9.05□□□□□ -0.96
CHCHD3P1-201ENST00000425516 STK31Q9BXU1 1019 aa9.05□□□□□ -0.96
CHCHD3P1-201ENST00000425516 C4AP0C0L4 1744 aa9.05□□□□□ -0.96
CHCHD3P1-201ENST00000425516 HRO43593 1189 aa9.04□□□□□ -0.96
CHCHD3P1-201ENST00000425516 TM4SF1P30408 202 aa9.04□□□□□ -0.96
CHCHD3P1-201ENST00000425516 AIMP1Q12904 312 aaKnown RBP9.04□□□□□ -0.96
CHCHD3P1-201ENST00000425516 FLIIQ13045 1269 aa9.04□□□□□ -0.96
CHCHD3P1-201ENST00000425516 USPL1Q5W0Q7 1092 aa9.04□□□□□ -0.96
CHCHD3P1-201ENST00000425516 CLEC4GQ6UXB4 293 aa9.04□□□□□ -0.96
CHCHD3P1-201ENST00000425516 GIGYF2Q6Y7W6 1299 aaKnown RBP9.04□□□□□ -0.96
CHCHD3P1-201ENST00000425516 ZNF330Q9Y3S2 320 aaPredicted RBP9.04□□□□□ -0.96
CHCHD3P1-201ENST00000425516 ADCY9O60503 1353 aa9.03□□□□□ -0.96
CHCHD3P1-201ENST00000425516 ZPR1O75312 459 aa9.03□□□□□ -0.96
CHCHD3P1-201ENST00000425516 BCAR3O75815 825 aa9.03□□□□□ -0.96
CHCHD3P1-201ENST00000425516 NLGN1Q8N2Q7 840 aa9.03□□□□□ -0.96
CHCHD3P1-201ENST00000425516 PLBD2Q8NHP8 589 aa9.03□□□□□ -0.96
CHCHD3P1-201ENST00000425516 BCL2L13Q9BXK5 485 aa9.03□□□□□ -0.96
CHCHD3P1-201ENST00000425516 ZBTB3Q9H5J0 574 aa9.03□□□□□ -0.96
CHCHD3P1-201ENST00000425516 ARIH1Q9Y4X5 557 aaPredicted RBP9.03□□□□□ -0.96
CHCHD3P1-201ENST00000425516 CACNA1FO60840 1977 aa9.03□□□□□ -0.96
CHCHD3P1-201ENST00000425516 COL24A1Q17RW2 1714 aa9.02□□□□□ -0.96
CHCHD3P1-201ENST00000425516 PI4KAP2A4QPH2 592 aa9.02□□□□□ -0.97
CHCHD3P1-201ENST00000425516 ZBTB7AO95365 584 aa9.02□□□□□ -0.97
CHCHD3P1-201ENST00000425516 PTGER2P43116 358 aa9.02□□□□□ -0.97
CHCHD3P1-201ENST00000425516 TBC1D9BQ66K14 1250 aa9.02□□□□□ -0.97
CHCHD3P1-201ENST00000425516 KSR2Q6VAB6 950 aa9.02□□□□□ -0.97
CHCHD3P1-201ENST00000425516 KIF6Q6ZMV9 814 aa9.02□□□□□ -0.97
CHCHD3P1-201ENST00000425516 NPM2Q86SE8 214 aaKnown RBP9.02□□□□□ -0.97
CHCHD3P1-201ENST00000425516 ZNF34Q8IZ26 560 aa9.02□□□□□ -0.97
CHCHD3P1-201ENST00000425516 PI4KAP1Q8N8J0 262 aa9.02□□□□□ -0.97
CHCHD3P1-201ENST00000425516 RNF166Q96A37 237 aaPredicted RBP9.02□□□□□ -0.97
CHCHD3P1-201ENST00000425516 ARXQ96QS3 562 aa9.02□□□□□ -0.97
CHCHD3P1-201ENST00000425516 MTFR1LQ9H019 292 aa9.02□□□□□ -0.97
CHCHD3P1-201ENST00000425516 SMC4Q9NTJ3 1288 aa9.02□□□□□ -0.97
CHCHD3P1-201ENST00000425516 VPS9D1Q9Y2B5 631 aa9.02□□□□□ -0.97
CHCHD3P1-201ENST00000425516 BCORQ6W2J9 1755 aa9.01□□□□□ -0.97
CHCHD3P1-201ENST00000425516 SCN7AQ01118 1682 aa9.01□□□□□ -0.97
CHCHD3P1-201ENST00000425516 DDX58O95786 925 aaKnown RBP9.01□□□□□ -0.97
CHCHD3P1-201ENST00000425516 PTPREP23469 700 aa9.01□□□□□ -0.97
CHCHD3P1-201ENST00000425516 TRIM28Q13263 835 aaKnown RBP9.01□□□□□ -0.97
CHCHD3P1-201ENST00000425516 TCIRG1Q13488 830 aa9.01□□□□□ -0.97
CHCHD3P1-201ENST00000425516 NFIXQ14938 502 aa9.01□□□□□ -0.97
CHCHD3P1-201ENST00000425516 TSR1Q2NL82 804 aaKnown RBP9.01□□□□□ -0.97
CHCHD3P1-201ENST00000425516 PROX2Q3B8N5 592 aa9.01□□□□□ -0.97
CHCHD3P1-201ENST00000425516 MSL1Q68DK7 614 aa9.01□□□□□ -0.97
CHCHD3P1-201ENST00000425516 TYW1BQ6NUM6 668 aa9.01□□□□□ -0.97
CHCHD3P1-201ENST00000425516 RIC3Q7Z5B4 369 aa9.01□□□□□ -0.97
CHCHD3P1-201ENST00000425516 ARHGAP45Q92619 1136 aa9.01□□□□□ -0.97
CHCHD3P1-201ENST00000425516 ZBED2Q9BTP6 218 aa9.01□□□□□ -0.97
CHCHD3P1-201ENST00000425516 ISCA1Q9BUE6 129 aa9.01□□□□□ -0.97
CHCHD3P1-201ENST00000425516 RCAN3Q9UKA8 241 aa9.01□□□□□ -0.97
CHCHD3P1-201ENST00000425516 NOB1Q9ULX3 412 aaKnown RBP9.01□□□□□ -0.97
CHCHD3P1-201ENST00000425516 PTPRCP08575 1304 aa9.01□□□□□ -0.97
CHCHD3P1-201ENST00000425516 ATP10DQ9P241 1426 aa9□□□□□ -0.97
CHCHD3P1-201ENST00000425516 F6X3S4 739 aa9□□□□□ -0.97
CHCHD3P1-201ENST00000425516 POLRMTO00411 1230 aaKnown RBP9□□□□□ -0.97
CHCHD3P1-201ENST00000425516 IGKV5-2P06315 115 aa9□□□□□ -0.97
CHCHD3P1-201ENST00000425516 DDR1Q08345 913 aa9□□□□□ -0.97
CHCHD3P1-201ENST00000425516 FKBP5Q13451 457 aaPredicted RBP9□□□□□ -0.97
CHCHD3P1-201ENST00000425516 NBR1Q14596 966 aa9□□□□□ -0.97
CHCHD3P1-201ENST00000425516 DNAAF4Q8WXU2 420 aa9□□□□□ -0.97
CHCHD3P1-201ENST00000425516 METTL22Q9BUU2 404 aaPredicted RBP9□□□□□ -0.97
CHCHD3P1-201ENST00000425516 ZNF652Q9Y2D9 606 aa9□□□□□ -0.97
CHCHD3P1-201ENST00000425516 MAP3K2Q9Y2U5 619 aa9□□□□□ -0.97
CHCHD3P1-201ENST00000425516 UBN2Q6ZU65 1347 aa9□□□□□ -0.97
CHCHD3P1-201ENST00000425516 KIF16BQ96L93 1317 aa9□□□□□ -0.97
CHCHD3P1-201ENST00000425516 NUP98P52948 1817 aa8.99□□□□□ -0.97
CHCHD3P1-201ENST00000425516 GRXCR2A6NFK2 248 aa8.99□□□□□ -0.97
CHCHD3P1-201ENST00000425516 MMP10P09238 476 aa8.99□□□□□ -0.97
CHCHD3P1-201ENST00000425516 HSP90AB3PQ58FF7 597 aa8.99□□□□□ -0.97
CHCHD3P1-201ENST00000425516 BEND3Q5T5X7 828 aa8.99□□□□□ -0.97
CHCHD3P1-201ENST00000425516 NLRP10Q86W26 655 aa8.99□□□□□ -0.97
CHCHD3P1-201ENST00000425516 SETDB2Q96T68 719 aa8.99□□□□□ -0.97
CHCHD3P1-201ENST00000425516 NIP7Q9Y221 180 aaKnown RBP eCLIP8.99□□□□□ -0.97
CHCHD3P1-201ENST00000425516 ATP5J2-PTCD1G3V325 749 aa8.98□□□□□ -0.97
CHCHD3P1-201ENST00000425516 TK2O00142 265 aa8.98□□□□□ -0.97
CHCHD3P1-201ENST00000425516 TRIM27P14373 513 aa8.98□□□□□ -0.97
CHCHD3P1-201ENST00000425516 GPTP24298 496 aa8.98□□□□□ -0.97
CHCHD3P1-201ENST00000425516 MLLT3P42568 568 aaPredicted RBP8.98□□□□□ -0.97
CHCHD3P1-201ENST00000425516 LINS1Q8NG48 757 aa8.98□□□□□ -0.97
CHCHD3P1-201ENST00000425516 MYD88Q99836 296 aa8.98□□□□□ -0.97
CHCHD3P1-201ENST00000425516 SPON1Q9HCB6 807 aa8.98□□□□□ -0.97
CHCHD3P1-201ENST00000425516 TNNQ9UQP3 1299 aa8.98□□□□□ -0.97
CHCHD3P1-201ENST00000425516 ARFGEF2Q9Y6D5 1785 aa8.98□□□□□ -0.97
CHCHD3P1-201ENST00000425516 SPDYE16A6NNV3 312 aaPredicted RBP8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms