RNA–Protein interactions for RNA: ENST00000423698.6

ERCC1-204, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 2 BASIC

Gene ERCC1, Length 3,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-204ENST00000423698 CABP4P57796 275 aa14.03□□□□□ -0.16
ERCC1-204ENST00000423698 GUCY1B3Q02153 619 aa14.03□□□□□ -0.16
ERCC1-204ENST00000423698 HSP90AB4PQ58FF6 505 aa14.03□□□□□ -0.16
ERCC1-204ENST00000423698 MTERF4Q7Z6M4 381 aaKnown RBP14.03□□□□□ -0.16
ERCC1-204ENST00000423698 DDX21Q9NR30 783 aaKnown RBP eCLIP14.03□□□□□ -0.16
ERCC1-204ENST00000423698 RPAP1Q9BWH6 1393 aaPredicted RBP14.02□□□□□ -0.16
ERCC1-204ENST00000423698 NEURL1BA8MQ27 555 aa14.02□□□□□ -0.16
ERCC1-204ENST00000423698 JAK2O60674 1132 aa14.02□□□□□ -0.16
ERCC1-204ENST00000423698 LARP1BQ659C4 914 aaKnown RBP14.02□□□□□ -0.16
ERCC1-204ENST00000423698 LMBR1LQ6UX01 489 aa14.02□□□□□ -0.16
ERCC1-204ENST00000423698 CLEC17AQ6ZS10 378 aa14.02□□□□□ -0.16
ERCC1-204ENST00000423698 TTLL7Q6ZT98 887 aa14.02□□□□□ -0.16
ERCC1-204ENST00000423698 CDC37L1Q7L3B6 337 aa14.02□□□□□ -0.16
ERCC1-204ENST00000423698 ZNF771Q7L3S4 317 aaPredicted RBP14.02□□□□□ -0.16
ERCC1-204ENST00000423698 ERBB3P21860 1342 aa14.02□□□□□ -0.17
ERCC1-204ENST00000423698 CYP27B1O15528 508 aa14.02□□□□□ -0.17
ERCC1-204ENST00000423698 ANAPC15P60006 121 aa14.02□□□□□ -0.17
ERCC1-204ENST00000423698 TTC14Q96N46 770 aa14.02□□□□□ -0.17
ERCC1-204ENST00000423698 NPHP4O75161 1426 aaPredicted RBP14.02□□□□□ -0.17
ERCC1-204ENST00000423698 ST3GAL1Q11201 340 aa14.01□□□□□ -0.17
ERCC1-204ENST00000423698 GCKRQ14397 625 aa14.01□□□□□ -0.17
ERCC1-204ENST00000423698 RUFY2Q8WXA3 655 aa14.01□□□□□ -0.17
ERCC1-204ENST00000423698 CCDC171Q6TFL3 1326 aa14.01□□□□□ -0.17
ERCC1-204ENST00000423698 MYRIPQ8NFW9 859 aa14.01□□□□□ -0.17
ERCC1-204ENST00000423698 SLC52A2Q9HAB3 445 aa14.01□□□□□ -0.17
ERCC1-204ENST00000423698 TMEM51Q9NW97 253 aa14.01□□□□□ -0.17
ERCC1-204ENST00000423698 DBNLQ9UJU6 430 aaKnown RBP14.01□□□□□ -0.17
ERCC1-204ENST00000423698 SLC27A2O14975 620 aa14.01□□□□□ -0.17
ERCC1-204ENST00000423698 ADGRL3Q9HAR2 1447 aa14□□□□□ -0.17
ERCC1-204ENST00000423698 GOLIM4O00461 696 aa14□□□□□ -0.17
ERCC1-204ENST00000423698 F13A1P00488 732 aa14□□□□□ -0.17
ERCC1-204ENST00000423698 BCL2L12Q9HB09 334 aa14□□□□□ -0.17
ERCC1-204ENST00000423698 NPHP3Q7Z494 1330 aa14□□□□□ -0.17
ERCC1-204ENST00000423698 PHKG2P15735 406 aa14□□□□□ -0.17
ERCC1-204ENST00000423698 CCT2P78371 535 aaKnown RBP14□□□□□ -0.17
ERCC1-204ENST00000423698 HS1BP3Q53T59 392 aa14□□□□□ -0.17
ERCC1-204ENST00000423698 VPS53Q5VIR6 699 aa14□□□□□ -0.17
ERCC1-204ENST00000423698 EVI5LQ96CN4 794 aa14□□□□□ -0.17
ERCC1-204ENST00000423698 NOLC1Q14978 699 aaKnown RBP eCLIP13.99□□□□□ -0.17
ERCC1-204ENST00000423698 LARP1Q6PKG0 1096 aaKnown RBP13.99□□□□□ -0.17
ERCC1-204ENST00000423698 TOM1L2Q6ZVM7 507 aa13.99□□□□□ -0.17
ERCC1-204ENST00000423698 SYNE4Q8N205 404 aa13.99□□□□□ -0.17
ERCC1-204ENST00000423698 LTN1O94822 1766 aa13.99□□□□□ -0.17
ERCC1-204ENST00000423698 MBD3O95983 291 aa13.99□□□□□ -0.17
ERCC1-204ENST00000423698 BLOC1S2Q6QNY1 142 aa13.99□□□□□ -0.17
ERCC1-204ENST00000423698 ERCC4Q92889 916 aaPredicted RBP13.99□□□□□ -0.17
ERCC1-204ENST00000423698 TRERF1Q96PN7 1200 aa13.99□□□□□ -0.17
ERCC1-204ENST00000423698 FTOQ9C0B1 505 aaKnown RBP eCLIP13.99□□□□□ -0.17
ERCC1-204ENST00000423698 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.99□□□□□ -0.17
ERCC1-204ENST00000423698 HAND2P61296 217 aa13.99□□□□□ -0.17
ERCC1-204ENST00000423698 PDCL2Q8N4E4 241 aa13.99□□□□□ -0.17
ERCC1-204ENST00000423698 KIF3AQ9Y496 699 aa13.99□□□□□ -0.17
ERCC1-204ENST00000423698 FAM208AQ9UK61 1670 aaKnown RBP13.98□□□□□ -0.17
ERCC1-204ENST00000423698 FKBP4Q02790 459 aaKnown RBP eCLIP13.98□□□□□ -0.173e-8■□□□□ 9.8
ERCC1-204ENST00000423698 STK11IPQ8N1F8 1099 aa13.98□□□□□ -0.17
ERCC1-204ENST00000423698 INTS4Q96HW7 963 aaKnown RBP13.98□□□□□ -0.17
ERCC1-204ENST00000423698 ALDH1L1O75891 902 aa13.98□□□□□ -0.17
ERCC1-204ENST00000423698 PUS3Q9BZE2 481 aaKnown RBP13.98□□□□□ -0.17
ERCC1-204ENST00000423698 NCOA5Q9HCD5 579 aaKnown RBP13.98□□□□□ -0.17
ERCC1-204ENST00000423698 LRRC24Q50LG9 513 aa13.97□□□□□ -0.17
ERCC1-204ENST00000423698 SYTL4Q96C24 671 aaPredicted RBP13.97□□□□□ -0.17
ERCC1-204ENST00000423698 MTMR6Q9Y217 621 aa13.97□□□□□ -0.17
ERCC1-204ENST00000423698 NECTIN1Q15223 517 aa13.97□□□□□ -0.17
ERCC1-204ENST00000423698 TTC41PQ6P2S7 1318 aa13.97□□□□□ -0.17
ERCC1-204ENST00000423698 TMEM94Q12767 1356 aa13.97□□□□□ -0.17
ERCC1-204ENST00000423698 NAA30Q147X3 362 aaPredicted RBP13.97□□□□□ -0.17
ERCC1-204ENST00000423698 GPHNQ9NQX3 736 aaPredicted RBP13.97□□□□□ -0.17
ERCC1-204ENST00000423698 LIG1P18858 919 aa13.96□□□□□ -0.17
ERCC1-204ENST00000423698 GPTP24298 496 aa13.96□□□□□ -0.17
ERCC1-204ENST00000423698 TTLL5Q6EMB2 1281 aa13.96□□□□□ -0.17
ERCC1-204ENST00000423698 PI16Q6UXB8 463 aa13.96□□□□□ -0.17
ERCC1-204ENST00000423698 ERC1Q8IUD2 1116 aa13.96□□□□□ -0.17
ERCC1-204ENST00000423698 IFNL2Q8IZJ0 200 aa13.96□□□□□ -0.17
ERCC1-204ENST00000423698 BRF1Q92994 677 aa13.96□□□□□ -0.17
ERCC1-204ENST00000423698 C19orf44Q9H6X5 657 aa13.96□□□□□ -0.17
ERCC1-204ENST00000423698 PRDM11Q9NQV5 511 aa13.96□□□□□ -0.17
ERCC1-204ENST00000423698 BABAM1Q9NWV8 329 aa13.96□□□□□ -0.17
ERCC1-204ENST00000423698 GOLGA6L4A6NEF3 574 aa13.96□□□□□ -0.18
ERCC1-204ENST00000423698 ADCY5O95622 1261 aa13.96□□□□□ -0.18
ERCC1-204ENST00000423698 PTPN12Q05209 780 aaKnown RBP13.96□□□□□ -0.18
ERCC1-204ENST00000423698 METTL22Q9BUU2 404 aaPredicted RBP13.96□□□□□ -0.18
ERCC1-204ENST00000423698 SNRPA1P09661 255 aaKnown RBP13.95□□□□□ -0.18
ERCC1-204ENST00000423698 TNNI3KQ59H18 835 aa13.95□□□□□ -0.18
ERCC1-204ENST00000423698 SYAP1Q96A49 352 aaPredicted RBP13.95□□□□□ -0.18
ERCC1-204ENST00000423698 FPGT-TNNI3KV9GXZ4 949 aa13.95□□□□□ -0.18
ERCC1-204ENST00000423698 CHD2O14647 1828 aaKnown RBP13.95□□□□□ -0.18
ERCC1-204ENST00000423698 HOXB7P09629 217 aa13.95□□□□□ -0.18
ERCC1-204ENST00000423698 CDK11BP21127 795 aaKnown RBP13.95□□□□□ -0.18
ERCC1-204ENST00000423698 Q6ZUG5 572 aa13.95□□□□□ -0.18
ERCC1-204ENST00000423698 TTC6Q86TZ1 520 aa13.95□□□□□ -0.18
ERCC1-204ENST00000423698 ZSWIM6Q9HCJ5 1215 aa13.95□□□□□ -0.18
ERCC1-204ENST00000423698 NBPF26B4DH59 902 aa13.94□□□□□ -0.18
ERCC1-204ENST00000423698 AOX1Q06278 1338 aa13.94□□□□□ -0.18
ERCC1-204ENST00000423698 NBPF14Q5TI25 921 aa13.94□□□□□ -0.18
ERCC1-204ENST00000423698 OTUD7BQ6GQQ9 843 aa13.94□□□□□ -0.18
ERCC1-204ENST00000423698 NBPF10Q6P3W6 841 aaKnown RBP13.94□□□□□ -0.18
ERCC1-204ENST00000423698 NBPF15Q8N660 670 aa13.94□□□□□ -0.18
ERCC1-204ENST00000423698 RIOK3O14730 519 aaKnown RBP13.94□□□□□ -0.18
ERCC1-204ENST00000423698 GORABQ5T7V8 394 aa13.94□□□□□ -0.18
ERCC1-204ENST00000423698 CNKSR2Q8WXI2 1034 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms