RNA–Protein interactions for RNA: ENST00000423485.5

TOP2A-201, Transcript of DNA topoisomerase II alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP2A, Length 5,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-201ENST00000423485 TGFB2P61812 414 aa4.28□□□□□ -1.72
TOP2A-201ENST00000423485 ZGPATQ8N5A5 531 aaKnown RBP4.28□□□□□ -1.72
TOP2A-201ENST00000423485 CUL5Q93034 780 aa4.28□□□□□ -1.72
TOP2A-201ENST00000423485 CEP131Q9UPN4 1083 aa4.28□□□□□ -1.72
TOP2A-201ENST00000423485 CNPY2Q9Y2B0 182 aa4.28□□□□□ -1.72
TOP2A-201ENST00000423485 COL3A1P02461 1466 aaPredicted RBP4.28□□□□□ -1.72
TOP2A-201ENST00000423485 INSRP06213 1382 aa4.28□□□□□ -1.72
TOP2A-201ENST00000423485 MEI4A8MW99 385 aa4.28□□□□□ -1.72
TOP2A-201ENST00000423485 RIMBP2O15034 1052 aa4.28□□□□□ -1.72
TOP2A-201ENST00000423485 PTPROQ16827 1216 aa4.28□□□□□ -1.72
TOP2A-201ENST00000423485 FAM161AQ3B820 660 aa4.28□□□□□ -1.72
TOP2A-201ENST00000423485 HACE1Q8IYU2 909 aa4.28□□□□□ -1.72
TOP2A-201ENST00000423485 PROM2Q8N271 834 aa4.28□□□□□ -1.72
TOP2A-201ENST00000423485 C1QTNF1Q9BXJ1 281 aa4.28□□□□□ -1.72
TOP2A-201ENST00000423485 CARD14Q9BXL6 1004 aa4.28□□□□□ -1.72
TOP2A-201ENST00000423485 PCDHB9Q9Y5E1 797 aa4.28□□□□□ -1.72
TOP2A-201ENST00000423485 MYO5AQ9Y4I1 1855 aaKnown RBP4.28□□□□□ -1.72
TOP2A-201ENST00000423485 C20orf194Q5TEA3 1177 aa4.27□□□□□ -1.73
TOP2A-201ENST00000423485 YAF2Q8IY57 180 aa4.27□□□□□ -1.73
TOP2A-201ENST00000423485 ANKRD24Q8TF21 1146 aa4.27□□□□□ -1.73
TOP2A-201ENST00000423485 LGR6Q9HBX8 967 aa4.27□□□□□ -1.73
TOP2A-201ENST00000423485 NCDNQ9UBB6 729 aa4.27□□□□□ -1.73
TOP2A-201ENST00000423485 ADGRB2O60241 1585 aa4.27□□□□□ -1.73
TOP2A-201ENST00000423485 TNPO2O14787 897 aaKnown RBP4.27□□□□□ -1.73
TOP2A-201ENST00000423485 LBX1P52954 281 aa4.27□□□□□ -1.73
TOP2A-201ENST00000423485 MAP10Q9P2G4 905 aa4.27□□□□□ -1.73
TOP2A-201ENST00000423485 MAP3K4Q9Y6R4 1608 aa4.27□□□□□ -1.73
TOP2A-201ENST00000423485 DLC1Q96QB1 1528 aa4.27□□□□□ -1.73
TOP2A-201ENST00000423485 CCDC57Q2TAC2 916 aa4.27□□□□□ -1.73
TOP2A-201ENST00000423485 NECAB2Q7Z6G3 386 aa4.27□□□□□ -1.73
TOP2A-201ENST00000423485 TRMT2AQ8IZ69 625 aaKnown RBP4.27□□□□□ -1.73
TOP2A-201ENST00000423485 ZNF784Q8NCA9 323 aaPredicted RBP4.27□□□□□ -1.73
TOP2A-201ENST00000423485 PIDD1Q9HB75 910 aa4.27□□□□□ -1.73
TOP2A-201ENST00000423485 GMEB2Q9UKD1 530 aa4.27□□□□□ -1.73
TOP2A-201ENST00000423485 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP4.27□□□□□ -1.73
TOP2A-201ENST00000423485 IL31Q6EBC2 164 aa4.27□□□□□ -1.73
TOP2A-201ENST00000423485 TMC4Q7Z404 712 aa4.27□□□□□ -1.73
TOP2A-201ENST00000423485 ABI1Q8IZP0 508 aa4.27□□□□□ -1.73
TOP2A-201ENST00000423485 DDX11Q96FC9 970 aa4.27□□□□□ -1.73
TOP2A-201ENST00000423485 ZFP91Q96JP5 570 aaPredicted RBP4.27□□□□□ -1.73
TOP2A-201ENST00000423485 FAM193BQ96PV7 902 aaPredicted RBP4.27□□□□□ -1.73
TOP2A-201ENST00000423485 CCDC61Q9Y6R9 512 aa4.27□□□□□ -1.73
TOP2A-201ENST00000423485 MAP1AP78559 2803 aaPredicted RBP4.27□□□□□ -1.73
TOP2A-201ENST00000423485 IFIT1P09914 478 aaKnown RBP4.27□□□□□ -1.73
TOP2A-201ENST00000423485 DESP17661 470 aa4.27□□□□□ -1.73
TOP2A-201ENST00000423485 USP5P45974 858 aa4.27□□□□□ -1.73
TOP2A-201ENST00000423485 PTGDRQ13258 359 aa4.27□□□□□ -1.73
TOP2A-201ENST00000423485 GLIPR1L2Q4G1C9 344 aa4.27□□□□□ -1.73
TOP2A-201ENST00000423485 POTEAQ6S8J7 498 aa4.27□□□□□ -1.73
TOP2A-201ENST00000423485 APOBEC3FQ8IUX4 373 aaKnown RBP4.27□□□□□ -1.73
TOP2A-201ENST00000423485 CCDC97Q96F63 343 aaPredicted RBP4.27□□□□□ -1.73
TOP2A-201ENST00000423485 NIP7Q9Y221 180 aaKnown RBP eCLIP4.27□□□□□ -1.73
TOP2A-201ENST00000423485 KAT6BQ8WYB5 2073 aa4.26□□□□□ -1.73
TOP2A-201ENST00000423485 BAG3O95817 575 aa4.26□□□□□ -1.73
TOP2A-201ENST00000423485 CAPN2P17655 700 aa4.26□□□□□ -1.73
TOP2A-201ENST00000423485 ARID5AQ03989 594 aa4.26□□□□□ -1.73
TOP2A-201ENST00000423485 TRMT44Q8IYL2 757 aaKnown RBP4.26□□□□□ -1.73
TOP2A-201ENST00000423485 TRIM22Q8IYM9 498 aa4.26□□□□□ -1.73
TOP2A-201ENST00000423485 ANKRD2Q9GZV1 360 aa4.26□□□□□ -1.73
TOP2A-201ENST00000423485 USP6P35125 1406 aa4.26□□□□□ -1.73
TOP2A-201ENST00000423485 CENPJQ9HC77 1338 aaPredicted RBP4.26□□□□□ -1.73
TOP2A-201ENST00000423485 SHANK2Q9UPX8 1470 aa4.26□□□□□ -1.73
TOP2A-201ENST00000423485 TRPA1O75762 1119 aa4.26□□□□□ -1.73
TOP2A-201ENST00000423485 NEBLO76041 1014 aa4.26□□□□□ -1.73
TOP2A-201ENST00000423485 MMP10P09238 476 aa4.26□□□□□ -1.73
TOP2A-201ENST00000423485 ZNF76P36508 570 aa4.26□□□□□ -1.73
TOP2A-201ENST00000423485 CHMP4CQ96CF2 233 aa4.26□□□□□ -1.73
TOP2A-201ENST00000423485 KIF12Q96FN5 646 aa4.26□□□□□ -1.73
TOP2A-201ENST00000423485 TFIP11Q9UBB9 837 aaKnown RBP4.26□□□□□ -1.73
TOP2A-201ENST00000423485 NSFL1CQ9UNZ2 370 aaKnown RBP4.26□□□□□ -1.73
TOP2A-201ENST00000423485 PEAK1Q9H792 1746 aa4.26□□□□□ -1.73
TOP2A-201ENST00000423485 EPHX2P34913 555 aa4.26□□□□□ -1.73
TOP2A-201ENST00000423485 MATR3P43243 847 aaKnown RBP eCLIP4.26□□□□□ -1.73
TOP2A-201ENST00000423485 ARRDC4Q8NCT1 418 aa4.26□□□□□ -1.73
TOP2A-201ENST00000423485 SIRT1Q96EB6 747 aa4.26□□□□□ -1.73
TOP2A-201ENST00000423485 FMNL2Q96PY5 1086 aa4.26□□□□□ -1.73
TOP2A-201ENST00000423485 EIF2AK3Q9NZJ5 1116 aaKnown RBP4.26□□□□□ -1.73
TOP2A-201ENST00000423485 CTNNA3Q9UI47 895 aa4.26□□□□□ -1.73
TOP2A-201ENST00000423485 COL4A1P02462 1669 aa4.26□□□□□ -1.73
TOP2A-201ENST00000423485 NUDT18Q6ZVK8 323 aa4.26□□□□□ -1.73
TOP2A-201ENST00000423485 CEP68Q76N32 757 aa4.26□□□□□ -1.73
TOP2A-201ENST00000423485 ANKRD18AQ8IVF6 992 aa4.26□□□□□ -1.73
TOP2A-201ENST00000423485 ANGEL1Q9UNK9 670 aaKnown RBP4.26□□□□□ -1.73
TOP2A-201ENST00000423485 TNNQ9UQP3 1299 aa4.26□□□□□ -1.73
TOP2A-201ENST00000423485 RIMS2Q9UQ26 1411 aa4.26□□□□□ -1.73
TOP2A-201ENST00000423485 RGL2O15211 777 aa4.25□□□□□ -1.73
TOP2A-201ENST00000423485 KIAA1211Q6ZU35 1233 aa4.25□□□□□ -1.73
TOP2A-201ENST00000423485 MKNK1Q9BUB5 465 aa4.25□□□□□ -1.73
TOP2A-201ENST00000423485 RAI14Q9P0K7 980 aa4.25□□□□□ -1.73
TOP2A-201ENST00000423485 GGA1Q9UJY5 639 aa4.25□□□□□ -1.73
TOP2A-201ENST00000423485 MAP2P11137 1827 aaKnown RBP4.25□□□□□ -1.73
TOP2A-201ENST00000423485 MANSC4A6NHS7 340 aaPredicted RBP4.25□□□□□ -1.73
TOP2A-201ENST00000423485 ANP32AP39687 249 aaKnown RBP4.25□□□□□ -1.73
TOP2A-201ENST00000423485 KIAA2012Q0VF49 1180 aa4.25□□□□□ -1.73
TOP2A-201ENST00000423485 ZC3H14Q6PJT7 736 aaKnown RBP4.25□□□□□ -1.73
TOP2A-201ENST00000423485 PRIMPOLQ96LW4 560 aa4.25□□□□□ -1.73
TOP2A-201ENST00000423485 PARK7Q99497 189 aaKnown RBP4.25□□□□□ -1.73
TOP2A-201ENST00000423485 UPF2Q9HAU5 1272 aaKnown RBP4.25□□□□□ -1.73
TOP2A-201ENST00000423485 DIAPH1O60610 1272 aaKnown RBP4.25□□□□□ -1.73
TOP2A-201ENST00000423485 INF2Q27J81 1249 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms