RNA–Protein interactions for RNA: ENST00000423431.5

SPCS1-202, Transcript of signal peptidase complex subunit 1, humanhuman

TSL 3 BASIC

Gene SPCS1, Length 822 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS1-202ENST00000423431 SEPT9Q9UHD8 586 aaPredicted RBP12.25□□□□□ -0.45
SPCS1-202ENST00000423431 THSD7BQ9C0I4 1608 aa12.25□□□□□ -0.45
SPCS1-202ENST00000423431 DLEC1Q9Y238 1755 aa12.25□□□□□ -0.45
SPCS1-202ENST00000423431 SCN4AP35499 1836 aa12.25□□□□□ -0.45
SPCS1-202ENST00000423431 CST9Q5W186 159 aa12.24□□□□□ -0.45
SPCS1-202ENST00000423431 DNAJC10Q8IXB1 793 aa12.24□□□□□ -0.45
SPCS1-202ENST00000423431 CARD11Q9BXL7 1154 aa12.24□□□□□ -0.45
SPCS1-202ENST00000423431 ZNF277Q9NRM2 450 aaPredicted RBP12.24□□□□□ -0.45
SPCS1-202ENST00000423431 DICER1Q9UPY3 1922 aaKnown RBP12.24□□□□□ -0.45
SPCS1-202ENST00000423431 GJA3Q9Y6H8 435 aa12.24□□□□□ -0.45
SPCS1-202ENST00000423431 AFDNP55196 1824 aaKnown RBP12.23□□□□□ -0.45
SPCS1-202ENST00000423431 SOS1Q07889 1333 aaPredicted RBP12.23□□□□□ -0.45
SPCS1-202ENST00000423431 HSP90AB1P08238 724 aaKnown RBP12.23□□□□□ -0.45
SPCS1-202ENST00000423431 LMOD1P29536 600 aaPredicted RBP12.23□□□□□ -0.45
SPCS1-202ENST00000423431 BRPF1P55201 1214 aaPredicted RBP12.23□□□□□ -0.45
SPCS1-202ENST00000423431 SOGA3Q5TF21 947 aa12.23□□□□□ -0.45
SPCS1-202ENST00000423431 PRPF40BQ6NWY9 871 aaKnown RBP12.23□□□□□ -0.45
SPCS1-202ENST00000423431 CNKSR1Q969H4 720 aa12.23□□□□□ -0.45
SPCS1-202ENST00000423431 ZNF831Q5JPB2 1677 aa12.22□□□□□ -0.45
SPCS1-202ENST00000423431 COL15A1P39059 1388 aa12.22□□□□□ -0.45
SPCS1-202ENST00000423431 TONSLQ96HA7 1378 aa12.22□□□□□ -0.45
SPCS1-202ENST00000423431 NFATC2IPQ8NCF5 419 aa12.22□□□□□ -0.45
SPCS1-202ENST00000423431 BRIP1Q9BX63 1249 aa12.22□□□□□ -0.45
SPCS1-202ENST00000423431 ZNF408Q9H9D4 720 aa12.22□□□□□ -0.45
SPCS1-202ENST00000423431 PDZRN3Q9UPQ7 1066 aa12.22□□□□□ -0.45
SPCS1-202ENST00000423431 FER1L6Q2WGJ9 1857 aa12.21□□□□□ -0.45
SPCS1-202ENST00000423431 ADAMTSL1Q8N6G6 1762 aa12.21□□□□□ -0.45
SPCS1-202ENST00000423431 CELF2O95319 508 aaKnown RBP12.21□□□□□ -0.45
SPCS1-202ENST00000423431 PDIA6Q15084 440 aa12.21□□□□□ -0.45
SPCS1-202ENST00000423431 CCDC93Q567U6 631 aa12.21□□□□□ -0.45
SPCS1-202ENST00000423431 ZNF530Q6P9A1 599 aaPredicted RBP12.21□□□□□ -0.45
SPCS1-202ENST00000423431 KIF24Q5T7B8 1368 aa12.2□□□□□ -0.46
SPCS1-202ENST00000423431 ST20-MTHFSA0A0A6YYL1 179 aa12.2□□□□□ -0.46
SPCS1-202ENST00000423431 DLL1O00548 723 aa12.2□□□□□ -0.46
SPCS1-202ENST00000423431 CANXP27824 592 aaKnown RBP12.2□□□□□ -0.46
SPCS1-202ENST00000423431 MTHFSP49914 203 aa12.2□□□□□ -0.46
SPCS1-202ENST00000423431 NBR1Q14596 966 aa12.2□□□□□ -0.46
SPCS1-202ENST00000423431 TBC1D9BQ66K14 1250 aa12.2□□□□□ -0.46
SPCS1-202ENST00000423431 PRR5LQ6MZQ0 368 aa12.2□□□□□ -0.46
SPCS1-202ENST00000423431 SAPCD2Q86UD0 394 aa12.2□□□□□ -0.46
SPCS1-202ENST00000423431 SPRYD3Q8NCJ5 442 aa12.2□□□□□ -0.46
SPCS1-202ENST00000423431 ZBTB1Q9Y2K1 713 aa12.2□□□□□ -0.46
SPCS1-202ENST00000423431 NRXN2Q9P2S2 1712 aa12.2□□□□□ -0.46
SPCS1-202ENST00000423431 FKBP4Q02790 459 aaKnown RBP eCLIP12.19□□□□□ -0.46
SPCS1-202ENST00000423431 TSR1Q2NL82 804 aaKnown RBP12.19□□□□□ -0.46
SPCS1-202ENST00000423431 PLEKHO1Q53GL0 409 aaPredicted RBP12.19□□□□□ -0.46
SPCS1-202ENST00000423431 GPC2Q8N158 579 aa12.19□□□□□ -0.46
SPCS1-202ENST00000423431 ZIC5Q96T25 663 aa12.19□□□□□ -0.46
SPCS1-202ENST00000423431 ZNF330Q9Y3S2 320 aaPredicted RBP12.19□□□□□ -0.46
SPCS1-202ENST00000423431 NCAPD2Q15021 1401 aa12.19□□□□□ -0.46
SPCS1-202ENST00000423431 EPS15P42566 896 aa12.18□□□□□ -0.46
SPCS1-202ENST00000423431 NEUROD1Q13562 356 aa12.18□□□□□ -0.46
SPCS1-202ENST00000423431 STYK1Q6J9G0 422 aa12.18□□□□□ -0.46
SPCS1-202ENST00000423431 OLFM4Q6UX06 510 aa12.18□□□□□ -0.46
SPCS1-202ENST00000423431 MASTLQ96GX5 879 aa12.18□□□□□ -0.46
SPCS1-202ENST00000423431 PUS7Q96PZ0 661 aaKnown RBP12.18□□□□□ -0.46
SPCS1-202ENST00000423431 ADAMTS7Q9UKP4 1686 aa12.17□□□□□ -0.46
SPCS1-202ENST00000423431 CYP19A1P11511 503 aaPredicted RBP12.17□□□□□ -0.46
SPCS1-202ENST00000423431 IARSP41252 1262 aaKnown RBP12.17□□□□□ -0.46
SPCS1-202ENST00000423431 EIF6P56537 245 aaKnown RBP12.17□□□□□ -0.46
SPCS1-202ENST00000423431 ST5P78524 1137 aa12.17□□□□□ -0.46
SPCS1-202ENST00000423431 C1orf141Q5JVX7 400 aa12.17□□□□□ -0.46
SPCS1-202ENST00000423431 NYAP1Q6ZVC0 841 aa12.17□□□□□ -0.46
SPCS1-202ENST00000423431 JDP2Q8WYK2 163 aa12.17□□□□□ -0.46
SPCS1-202ENST00000423431 TJP1Q07157 1748 aa12.17□□□□□ -0.46
SPCS1-202ENST00000423431 FZD9O00144 591 aa12.16□□□□□ -0.46
SPCS1-202ENST00000423431 MAP3K7O43318 606 aa12.16□□□□□ -0.46
SPCS1-202ENST00000423431 SRGNP10124 158 aa12.16□□□□□ -0.46
SPCS1-202ENST00000423431 CNBD1Q8NA66 436 aa12.16□□□□□ -0.46
SPCS1-202ENST00000423431 SIN3AQ96ST3 1273 aa12.16□□□□□ -0.46
SPCS1-202ENST00000423431 HPS5Q9UPZ3 1129 aa12.16□□□□□ -0.46
SPCS1-202ENST00000423431 WASHC2AQ641Q2 1341 aa12.15□□□□□ -0.46
SPCS1-202ENST00000423431 COL11A2P13942 1736 aaPredicted RBP12.15□□□□□ -0.46
SPCS1-202ENST00000423431 SPDYE16A6NNV3 312 aaPredicted RBP12.15□□□□□ -0.46
SPCS1-202ENST00000423431 TRPA1O75762 1119 aa12.15□□□□□ -0.46
SPCS1-202ENST00000423431 FXR1P51114 621 aaKnown RBP eCLIP12.15□□□□□ -0.46
SPCS1-202ENST00000423431 NOGQ13253 232 aa12.15□□□□□ -0.46
SPCS1-202ENST00000423431 CTU1Q7Z7A3 348 aaKnown RBP12.15□□□□□ -0.46
SPCS1-202ENST00000423431 SYNE4Q8N205 404 aa12.15□□□□□ -0.46
SPCS1-202ENST00000423431 GLIS2Q9BZE0 524 aaPredicted RBP12.15□□□□□ -0.46
SPCS1-202ENST00000423431 SLX4Q8IY92 1834 aa12.15□□□□□ -0.46
SPCS1-202ENST00000423431 SLC39A6Q13433 755 aa12.14□□□□□ -0.47
SPCS1-202ENST00000423431 AKAP4Q5JQC9 854 aa12.14□□□□□ -0.47
SPCS1-202ENST00000423431 USP50Q70EL3 339 aaPredicted RBP12.14□□□□□ -0.47
SPCS1-202ENST00000423431 IRX2Q9BZI1 471 aaPredicted RBP12.14□□□□□ -0.47
SPCS1-202ENST00000423431 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.14□□□□□ -0.47
SPCS1-202ENST00000423431 ANKRD31Q8N7Z5 1873 aa12.13□□□□□ -0.47
SPCS1-202ENST00000423431 SCNN1DP51172 638 aa12.13□□□□□ -0.47
SPCS1-202ENST00000423431 EIF4A2Q14240 407 aaKnown RBP12.13□□□□□ -0.47
SPCS1-202ENST00000423431 E2F4Q16254 413 aa12.13□□□□□ -0.47
SPCS1-202ENST00000423431 RTKN2Q8IZC4 609 aa12.13□□□□□ -0.47
SPCS1-202ENST00000423431 C7orf43Q8WVR3 580 aa12.13□□□□□ -0.47
SPCS1-202ENST00000423431 LRCH3Q96II8 777 aa12.13□□□□□ -0.47
SPCS1-202ENST00000423431 HHIPL1Q96JK4 782 aa12.13□□□□□ -0.47
SPCS1-202ENST00000423431 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.13□□□□□ -0.47
SPCS1-202ENST00000423431 TBC1D2BQ9UPU7 963 aa12.13□□□□□ -0.47
SPCS1-202ENST00000423431 CACNA1SQ13698 1873 aa12.12□□□□□ -0.47
SPCS1-202ENST00000423431 A0A087WZG4 1122 aa12.12□□□□□ -0.47
SPCS1-202ENST00000423431 HUNKP57058 714 aa12.12□□□□□ -0.47
SPCS1-202ENST00000423431 AMOTQ4VCS5 1084 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms