RNA–Protein interactions for RNA: ENST00000421722.5

PMS1-208, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2

Gene PMS1, Length 2,285 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-208ENST00000421722 TAF7Q15545 349 aaPredicted RBP8.88□□□□□ -0.99
PMS1-208ENST00000421722 SUSD4Q5VX71 490 aa8.88□□□□□ -0.99
PMS1-208ENST00000421722 DPP8Q6V1X1 898 aaPredicted RBP8.88□□□□□ -0.99
PMS1-208ENST00000421722 MPNDQ8N594 471 aa8.88□□□□□ -0.99
PMS1-208ENST00000421722 RSPH6AQ9H0K4 717 aa8.88□□□□□ -0.99
PMS1-208ENST00000421722 ANKRD36CQ5JPF3 1778 aa8.88□□□□□ -0.99
PMS1-208ENST00000421722 ZNF157P51786 506 aaPredicted RBP8.87□□□□□ -0.99
PMS1-208ENST00000421722 FKBP1BP68106 108 aa8.87□□□□□ -0.99
PMS1-208ENST00000421722 NCBP3Q53F19 620 aaKnown RBP8.87□□□□□ -0.99
PMS1-208ENST00000421722 CSRNP1Q96S65 589 aa8.87□□□□□ -0.99
PMS1-208ENST00000421722 DDX60Q8IY21 1712 aaKnown RBP8.87□□□□□ -0.99
PMS1-208ENST00000421722 TRPA1O75762 1119 aa8.87□□□□□ -0.99
PMS1-208ENST00000421722 KRT26Q7Z3Y9 468 aa8.87□□□□□ -0.99
PMS1-208ENST00000421722 DCPSQ96C86 337 aaKnown RBP8.87□□□□□ -0.99
PMS1-208ENST00000421722 ABCC4O15439 1325 aa8.87□□□□□ -0.99
PMS1-208ENST00000421722 UBN2Q6ZU65 1347 aa8.87□□□□□ -0.99
PMS1-208ENST00000421722 PER1O15534 1290 aaPredicted RBP8.86□□□□□ -0.99
PMS1-208ENST00000421722 PRKAR2BP31323 418 aa8.86□□□□□ -0.99
PMS1-208ENST00000421722 GIGYF2Q6Y7W6 1299 aaKnown RBP8.86□□□□□ -0.99
PMS1-208ENST00000421722 MICALL2Q8IY33 904 aa8.86□□□□□ -0.99
PMS1-208ENST00000421722 NECTIN2Q92692 538 aa8.86□□□□□ -0.99
PMS1-208ENST00000421722 PHACTR3Q96KR7 559 aa8.86□□□□□ -0.99
PMS1-208ENST00000421722 CFAP53Q96M91 514 aa8.86□□□□□ -0.99
PMS1-208ENST00000421722 ZNF609O15014 1411 aa8.86□□□□□ -0.99
PMS1-208ENST00000421722 RAD17O75943 681 aa8.85□□□□□ -0.99
PMS1-208ENST00000421722 KCNA4P22459 653 aa8.85□□□□□ -0.99
PMS1-208ENST00000421722 UTP14AQ9BVJ6 771 aaKnown RBP8.85□□□□□ -0.99
PMS1-208ENST00000421722 NUDCQ9Y266 331 aa8.85□□□□□ -0.99
PMS1-208ENST00000421722 KDM3BQ7LBC6 1761 aa8.85□□□□□ -0.99
PMS1-208ENST00000421722 LRRC37AA6NMS7 1700 aa8.85□□□□□ -0.99
PMS1-208ENST00000421722 HABP4Q5JVS0 413 aaKnown RBP8.85□□□□□ -0.99
PMS1-208ENST00000421722 FBXO46Q6PJ61 603 aaPredicted RBP8.85□□□□□ -0.99
PMS1-208ENST00000421722 RASAL3Q86YV0 1011 aa8.85□□□□□ -0.99
PMS1-208ENST00000421722 PAPPA2Q9BXP8 1791 aa8.85□□□□□ -0.99
PMS1-208ENST00000421722 YDJCA8MPS7 323 aa8.84□□□□□ -0.99
PMS1-208ENST00000421722 GRAPQ13588 217 aa8.84□□□□□ -0.99
PMS1-208ENST00000421722 TTLL7Q6ZT98 887 aa8.84□□□□□ -0.99
PMS1-208ENST00000421722 C3orf67Q6ZVT6 689 aa8.84□□□□□ -0.99
PMS1-208ENST00000421722 GRAPLQ8TC17 118 aaPredicted RBP8.84□□□□□ -0.99
PMS1-208ENST00000421722 CFHR5Q9BXR6 569 aa8.84□□□□□ -0.99
PMS1-208ENST00000421722 HDAC9Q9UKV0 1011 aa8.84□□□□□ -0.99
PMS1-208ENST00000421722 LAMB2P55268 1798 aa8.84□□□□□ -0.99
PMS1-208ENST00000421722 GPTP24298 496 aa8.84□□□□□ -0.99
PMS1-208ENST00000421722 HSP90AB3PQ58FF7 597 aa8.84□□□□□ -0.99
PMS1-208ENST00000421722 TCERG1O14776 1098 aaKnown RBP8.83□□□□□ -1
PMS1-208ENST00000421722 DDX46Q7L014 1031 aaKnown RBP8.83□□□□□ -1
PMS1-208ENST00000421722 MCM10Q7L590 875 aa8.83□□□□□ -1
PMS1-208ENST00000421722 DUOX1Q9NRD9 1551 aa8.83□□□□□ -1
PMS1-208ENST00000421722 PSMD14O00487 310 aa8.83□□□□□ -1
PMS1-208ENST00000421722 TM4SF4P48230 202 aa8.83□□□□□ -1
PMS1-208ENST00000421722 CC2D1BQ5T0F9 858 aaKnown RBP8.83□□□□□ -1
PMS1-208ENST00000421722 INTS3Q68E01 1043 aaKnown RBP8.83□□□□□ -1
PMS1-208ENST00000421722 SULF1Q8IWU6 871 aa8.83□□□□□ -1
PMS1-208ENST00000421722 CDCA5Q96FF9 252 aa8.83□□□□□ -1
PMS1-208ENST00000421722 EYA3Q99504 573 aa8.83□□□□□ -1
PMS1-208ENST00000421722 PITPNM2Q9BZ72 1349 aa8.82□□□□□ -1
PMS1-208ENST00000421722 ADM5C9JUS6 153 aa8.82□□□□□ -1
PMS1-208ENST00000421722 EIF4A1P60842 406 aaKnown RBP8.82□□□□□ -1
PMS1-208ENST00000421722 SAMD7Q7Z3H4 446 aa8.82□□□□□ -1
PMS1-208ENST00000421722 RRP7AQ9Y3A4 280 aaKnown RBP8.82□□□□□ -1
PMS1-208ENST00000421722 SHTN1A0MZ66 631 aa8.82□□□□□ -1
PMS1-208ENST00000421722 ZNF280AP59817 542 aaPredicted RBP8.82□□□□□ -1
PMS1-208ENST00000421722 KIF4BQ2VIQ3 1234 aa8.82□□□□□ -1
PMS1-208ENST00000421722 TBC1D10BQ4KMP7 808 aaPredicted RBP8.82□□□□□ -1
PMS1-208ENST00000421722 NGEFQ8N5V2 710 aa8.82□□□□□ -1
PMS1-208ENST00000421722 ZBTB3Q9H5J0 574 aa8.82□□□□□ -1
PMS1-208ENST00000421722 PDE4DIPQ5VU43 2346 aa8.81□□□□□ -1
PMS1-208ENST00000421722 GPR25O00155 361 aa8.81□□□□□ -1
PMS1-208ENST00000421722 FKTNO75072 461 aa8.81□□□□□ -1
PMS1-208ENST00000421722 VIL1P09327 827 aaKnown RBP8.81□□□□□ -1
PMS1-208ENST00000421722 SLC51AQ86UW1 340 aa8.81□□□□□ -1
PMS1-208ENST00000421722 ZNF296Q8WUU4 475 aaPredicted RBP8.81□□□□□ -1
PMS1-208ENST00000421722 RBBP6Q7Z6E9 1792 aaKnown RBP8.81□□□□□ -1
PMS1-208ENST00000421722 WASHC4Q2M389 1173 aa8.8□□□□□ -1
PMS1-208ENST00000421722 ZBTB12Q9Y330 459 aaPredicted RBP8.8□□□□□ -1
PMS1-208ENST00000421722 SREBF2Q12772 1141 aa8.8□□□□□ -1
PMS1-208ENST00000421722 AGBL3Q8NEM8 1001 aa8.8□□□□□ -1
PMS1-208ENST00000421722 POLR2AP24928 1970 aaKnown RBP8.8□□□□□ -1
PMS1-208ENST00000421722 ECE2O60344 883 aa8.79□□□□□ -1
PMS1-208ENST00000421722 MYL6BP14649 208 aa8.79□□□□□ -1
PMS1-208ENST00000421722 MMP14P50281 582 aa8.79□□□□□ -1
PMS1-208ENST00000421722 LRP10Q7Z4F1 713 aa8.79□□□□□ -1
PMS1-208ENST00000421722 NLRP10Q86W26 655 aa8.79□□□□□ -1
PMS1-208ENST00000421722 BABAM1Q9NWV8 329 aa8.79□□□□□ -1
PMS1-208ENST00000421722 GGA3Q9NZ52 723 aa8.79□□□□□ -1
PMS1-208ENST00000421722 SH3TC1Q8TE82 1336 aa8.79□□□□□ -1
PMS1-208ENST00000421722 RTL9Q8NET4 1388 aa8.79□□□□□ -1
PMS1-208ENST00000421722 ALDH1A1P00352 501 aa8.79□□□□□ -1
PMS1-208ENST00000421722 U2AF1L5P0DN76 240 aaPredicted RBP8.79□□□□□ -1
PMS1-208ENST00000421722 U2AF1Q01081 240 aaKnown RBP eCLIP8.79□□□□□ -1
PMS1-208ENST00000421722 DCTN1Q14203 1278 aa8.79□□□□□ -1
PMS1-208ENST00000421722 SF3B3Q15393 1217 aaKnown RBP8.79□□□□□ -1
PMS1-208ENST00000421722 DLK2Q6UY11 383 aa8.79□□□□□ -1
PMS1-208ENST00000421722 PCNTO95613 3336 aa8.78□□□□□ -1
PMS1-208ENST00000421722 TCIRG1Q13488 830 aa8.78□□□□□ -1
PMS1-208ENST00000421722 RBM26Q5T8P6 1007 aaKnown RBP8.78□□□□□ -1
PMS1-208ENST00000421722 TNRC18O15417 2968 aaPredicted RBP8.78□□□□□ -1
PMS1-208ENST00000421722 PSME4Q14997 1843 aa8.78□□□□□ -1
PMS1-208ENST00000421722 TBC1D8O95759 1140 aa8.78□□□□□ -1
PMS1-208ENST00000421722 EGFRP00533 1210 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms