RNA–Protein interactions for RNA: ENST00000420746.1

TRIM39-206, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 708 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-206ENST00000420746 RANBP2P49792 3224 aaKnown RBP12.23□□□□□ -0.45
TRIM39-206ENST00000420746 CEMIPQ8WUJ3 1361 aa12.23□□□□□ -0.45
TRIM39-206ENST00000420746 YDJCA8MPS7 323 aa12.23□□□□□ -0.45
TRIM39-206ENST00000420746 DPP8Q6V1X1 898 aaPredicted RBP12.23□□□□□ -0.45
TRIM39-206ENST00000420746 NUTM1Q86Y26 1132 aa12.23□□□□□ -0.45
TRIM39-206ENST00000420746 IL17REQ8NFR9 667 aa12.23□□□□□ -0.45
TRIM39-206ENST00000420746 ARMC5Q96C12 935 aa12.23□□□□□ -0.45
TRIM39-206ENST00000420746 PRAMEF22A3QJZ6 481 aa12.22□□□□□ -0.45
TRIM39-206ENST00000420746 ERVV-1B6SEH8 477 aa12.22□□□□□ -0.45
TRIM39-206ENST00000420746 HMOX1P09601 288 aa12.22□□□□□ -0.45
TRIM39-206ENST00000420746 SNRPA1P09661 255 aaKnown RBP12.22□□□□□ -0.45
TRIM39-206ENST00000420746 PIP4K2AP48426 406 aaPredicted RBP12.22□□□□□ -0.45
TRIM39-206ENST00000420746 SREBF2Q12772 1141 aa12.22□□□□□ -0.45
TRIM39-206ENST00000420746 HLFQ16534 295 aa12.22□□□□□ -0.45
TRIM39-206ENST00000420746 TBC1D10BQ4KMP7 808 aaPredicted RBP12.22□□□□□ -0.45
TRIM39-206ENST00000420746 SLC51AQ86UW1 340 aa12.22□□□□□ -0.45
TRIM39-206ENST00000420746 CDCA5Q96FF9 252 aa12.22□□□□□ -0.45
TRIM39-206ENST00000420746 GNAT3A8MTJ3 354 aa12.21□□□□□ -0.45
TRIM39-206ENST00000420746 NBPF26B4DH59 902 aa12.21□□□□□ -0.45
TRIM39-206ENST00000420746 EGFRP00533 1210 aa12.21□□□□□ -0.45
TRIM39-206ENST00000420746 NBPF10Q6P3W6 841 aaKnown RBP12.21□□□□□ -0.45
TRIM39-206ENST00000420746 MORC1Q86VD1 984 aa12.21□□□□□ -0.45
TRIM39-206ENST00000420746 ZBTB12Q9Y330 459 aaPredicted RBP12.21□□□□□ -0.45
TRIM39-206ENST00000420746 TCERG1O14776 1098 aaKnown RBP12.2□□□□□ -0.46
TRIM39-206ENST00000420746 BBOX1O75936 387 aa12.2□□□□□ -0.46
TRIM39-206ENST00000420746 ALDH1A1P00352 501 aa12.2□□□□□ -0.46
TRIM39-206ENST00000420746 EN2P19622 333 aaPredicted RBP12.2□□□□□ -0.46
TRIM39-206ENST00000420746 KIF4BQ2VIQ3 1234 aa12.2□□□□□ -0.46
TRIM39-206ENST00000420746 OTOP1Q7RTM1 612 aa12.2□□□□□ -0.46
TRIM39-206ENST00000420746 SP8Q8IXZ3 490 aa12.2□□□□□ -0.46
TRIM39-206ENST00000420746 MPNDQ8N594 471 aa12.2□□□□□ -0.46
TRIM39-206ENST00000420746 GAS2L2Q8NHY3 880 aa12.2□□□□□ -0.46
TRIM39-206ENST00000420746 GGA3Q9NZ52 723 aa12.2□□□□□ -0.46
TRIM39-206ENST00000420746 TRIM17Q9Y577 477 aa12.2□□□□□ -0.46
TRIM39-206ENST00000420746 ABCC4O15439 1325 aa12.19□□□□□ -0.46
TRIM39-206ENST00000420746 BTBD11A6QL63 1104 aa12.19□□□□□ -0.46
TRIM39-206ENST00000420746 H0YGN5 161 aa12.19□□□□□ -0.46
TRIM39-206ENST00000420746 PSMD14O00487 310 aa12.19□□□□□ -0.46
TRIM39-206ENST00000420746 KIAA0100Q14667 2235 aaKnown RBP12.18□□□□□ -0.46
TRIM39-206ENST00000420746 KCNQ3O43525 872 aa12.18□□□□□ -0.46
TRIM39-206ENST00000420746 CHRDL2Q6WN34 429 aa12.18□□□□□ -0.46
TRIM39-206ENST00000420746 NECTIN2Q92692 538 aa12.18□□□□□ -0.46
TRIM39-206ENST00000420746 NLRP3Q96P20 1036 aa12.18□□□□□ -0.46
TRIM39-206ENST00000420746 MAP3K15Q6ZN16 1313 aa12.17□□□□□ -0.46
TRIM39-206ENST00000420746 UBN2Q6ZU65 1347 aa12.17□□□□□ -0.46
TRIM39-206ENST00000420746 NTSR2O95665 410 aa12.17□□□□□ -0.46
TRIM39-206ENST00000420746 TMC4Q7Z404 712 aa12.17□□□□□ -0.46
TRIM39-206ENST00000420746 TMEM106CQ9BVX2 250 aa12.17□□□□□ -0.46
TRIM39-206ENST00000420746 RBM27Q9P2N5 1060 aaKnown RBP12.17□□□□□ -0.46
TRIM39-206ENST00000420746 PTPN22Q9Y2R2 807 aa12.17□□□□□ -0.46
TRIM39-206ENST00000420746 ZNF609O15014 1411 aa12.17□□□□□ -0.46
TRIM39-206ENST00000420746 CEP290O15078 2479 aa12.17□□□□□ -0.46
TRIM39-206ENST00000420746 SLC10A5Q5PT55 438 aa12.16□□□□□ -0.46
TRIM39-206ENST00000420746 RBM26Q5T8P6 1007 aaKnown RBP12.16□□□□□ -0.46
TRIM39-206ENST00000420746 SUSD4Q5VX71 490 aa12.16□□□□□ -0.46
TRIM39-206ENST00000420746 C3orf67Q6ZVT6 689 aa12.16□□□□□ -0.46
TRIM39-206ENST00000420746 R3HDMLQ9H3Y0 253 aa12.16□□□□□ -0.46
TRIM39-206ENST00000420746 DUOX1Q9NRD9 1551 aa12.16□□□□□ -0.46
TRIM39-206ENST00000420746 PPP1R42Q7Z4L9 355 aa12.15□□□□□ -0.46
TRIM39-206ENST00000420746 ZNF34Q8IZ26 560 aa12.15□□□□□ -0.46
TRIM39-206ENST00000420746 ERO1AQ96HE7 468 aa12.15□□□□□ -0.46
TRIM39-206ENST00000420746 ZNF333Q96JL9 665 aa12.15□□□□□ -0.46
TRIM39-206ENST00000420746 PRO3102Q9H379 93 aa12.15□□□□□ -0.46
TRIM39-206ENST00000420746 POLR2AP24928 1970 aaKnown RBP12.15□□□□□ -0.46
TRIM39-206ENST00000420746 A0A1W2PPC1 479 aa12.14□□□□□ -0.47
TRIM39-206ENST00000420746 DIAPH1O60610 1272 aaKnown RBP12.14□□□□□ -0.47
TRIM39-206ENST00000420746 INHBEP58166 350 aa12.14□□□□□ -0.47
TRIM39-206ENST00000420746 ZNF280AP59817 542 aaPredicted RBP12.14□□□□□ -0.47
TRIM39-206ENST00000420746 PARP10Q53GL7 1025 aa12.14□□□□□ -0.47
TRIM39-206ENST00000420746 ANGEL2Q5VTE6 544 aaKnown RBP12.14□□□□□ -0.47
TRIM39-206ENST00000420746 PANK3Q9H999 370 aa12.14□□□□□ -0.47
TRIM39-206ENST00000420746 RTL9Q8NET4 1388 aa12.14□□□□□ -0.47
TRIM39-206ENST00000420746 WASHC4Q2M389 1173 aa12.13□□□□□ -0.47
TRIM39-206ENST00000420746 KIF6Q6ZMV9 814 aa12.13□□□□□ -0.47
TRIM39-206ENST00000420746 ASTN2O75129 1339 aaPredicted RBP12.12□□□□□ -0.47
TRIM39-206ENST00000420746 LRRC37AA6NMS7 1700 aa12.12□□□□□ -0.47
TRIM39-206ENST00000420746 DDX60Q8IY21 1712 aaKnown RBP12.12□□□□□ -0.47
TRIM39-206ENST00000420746 NUP98P52948 1817 aa12.12□□□□□ -0.47
TRIM39-206ENST00000420746 UBE2Q2LH0YL09 131 aa12.12□□□□□ -0.47
TRIM39-206ENST00000420746 VIL1P09327 827 aaKnown RBP12.12□□□□□ -0.47
TRIM39-206ENST00000420746 GPTP24298 496 aa12.12□□□□□ -0.47
TRIM39-206ENST00000420746 TCIRG1Q13488 830 aa12.12□□□□□ -0.47
TRIM39-206ENST00000420746 GRAPQ13588 217 aa12.12□□□□□ -0.47
TRIM39-206ENST00000420746 SCARF1Q14162 830 aa12.12□□□□□ -0.47
TRIM39-206ENST00000420746 MOB2Q70IA6 237 aa12.12□□□□□ -0.47
TRIM39-206ENST00000420746 GRAPLQ8TC17 118 aaPredicted RBP12.12□□□□□ -0.47
TRIM39-206ENST00000420746 DBNDD1Q9H9R9 158 aa12.12□□□□□ -0.47
TRIM39-206ENST00000420746 UNC80Q8N2C7 3258 aa12.11□□□□□ -0.47
TRIM39-206ENST00000420746 MANSC4A6NHS7 340 aaPredicted RBP12.11□□□□□ -0.47
TRIM39-206ENST00000420746 ECE2O60344 883 aa12.11□□□□□ -0.47
TRIM39-206ENST00000420746 GIGYF2Q6Y7W6 1299 aaKnown RBP12.11□□□□□ -0.47
TRIM39-206ENST00000420746 NBPF11Q86T75 865 aa12.11□□□□□ -0.47
TRIM39-206ENST00000420746 EFCC1Q9HA90 598 aa12.11□□□□□ -0.47
TRIM39-206ENST00000420746 LAMB4A4D0S4 1761 aa12.1□□□□□ -0.47
TRIM39-206ENST00000420746 LAMA3Q16787 3333 aa12.1□□□□□ -0.47
TRIM39-206ENST00000420746 NF2P35240 595 aa12.1□□□□□ -0.47
TRIM39-206ENST00000420746 SPRYD7Q5W111 196 aa12.1□□□□□ -0.47
TRIM39-206ENST00000420746 DDX46Q7L014 1031 aaKnown RBP12.1□□□□□ -0.47
TRIM39-206ENST00000420746 IFNL1Q8IU54 200 aa12.1□□□□□ -0.47
TRIM39-206ENST00000420746 AGBL3Q8NEM8 1001 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms