RNA–Protein interactions for RNA: ENST00000418518.2

LINCMD1-201, Transcript of long intergenic non-protein coding RNA, muscle differentiation 1, humanhuman

TSL 5 BASIC

Gene LINCMD1, Length 462 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINCMD1-201ENST00000418518 AK7Q96M32 723 aa10.98□□□□□ -0.65
LINCMD1-201ENST00000418518 DIAPH3Q9NSV4 1193 aa10.98□□□□□ -0.65
LINCMD1-201ENST00000418518 PALD1Q9ULE6 856 aa10.98□□□□□ -0.65
LINCMD1-201ENST00000418518 ABCC12Q96J65 1359 aa10.98□□□□□ -0.65
LINCMD1-201ENST00000418518 LAMA4Q16363 1823 aa10.98□□□□□ -0.65
LINCMD1-201ENST00000418518 DOCK2Q92608 1830 aa10.98□□□□□ -0.65
LINCMD1-201ENST00000418518 FRAT2O75474 233 aaPredicted RBP10.97□□□□□ -0.65
LINCMD1-201ENST00000418518 CRKLP46109 303 aaKnown RBP10.97□□□□□ -0.65
LINCMD1-201ENST00000418518 DZIP3Q86Y13 1208 aaKnown RBP10.97□□□□□ -0.65
LINCMD1-201ENST00000418518 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.97□□□□□ -0.65
LINCMD1-201ENST00000418518 SYTL4Q96C24 671 aaPredicted RBP10.97□□□□□ -0.65
LINCMD1-201ENST00000418518 HAUS7Q99871 368 aa10.97□□□□□ -0.65
LINCMD1-201ENST00000418518 C4AP0C0L4 1744 aa10.97□□□□□ -0.65
LINCMD1-201ENST00000418518 C4BP0C0L5 1744 aa10.97□□□□□ -0.65
LINCMD1-201ENST00000418518 ATRNO75882 1429 aa10.96□□□□□ -0.65
LINCMD1-201ENST00000418518 RTL9Q8NET4 1388 aa10.96□□□□□ -0.65
LINCMD1-201ENST00000418518 CCDC171Q6TFL3 1326 aa10.96□□□□□ -0.65
LINCMD1-201ENST00000418518 UBN2Q6ZU65 1347 aa10.96□□□□□ -0.65
LINCMD1-201ENST00000418518 ITPK1Q13572 414 aa10.96□□□□□ -0.65
LINCMD1-201ENST00000418518 RAB3GAP1Q15042 981 aa10.96□□□□□ -0.65
LINCMD1-201ENST00000418518 CNTNAP4Q9C0A0 1308 aa10.95□□□□□ -0.66
LINCMD1-201ENST00000418518 CAMTA2O94983 1202 aa10.95□□□□□ -0.66
LINCMD1-201ENST00000418518 ATP6V1AP38606 617 aa10.95□□□□□ -0.66
LINCMD1-201ENST00000418518 CTSWP56202 376 aa10.95□□□□□ -0.66
LINCMD1-201ENST00000418518 CUL4AQ13619 759 aa10.95□□□□□ -0.66
LINCMD1-201ENST00000418518 CWC27Q6UX04 472 aaKnown RBP10.95□□□□□ -0.66
LINCMD1-201ENST00000418518 CLEC17AQ6ZS10 378 aa10.95□□□□□ -0.66
LINCMD1-201ENST00000418518 ACSBG1Q96GR2 724 aa10.95□□□□□ -0.66
LINCMD1-201ENST00000418518 NGLY1Q96IV0 654 aa10.95□□□□□ -0.66
LINCMD1-201ENST00000418518 C8orf37Q96NL8 207 aa10.95□□□□□ -0.66
LINCMD1-201ENST00000418518 DBNDD2Q9BQY9 259 aa10.95□□□□□ -0.66
LINCMD1-201ENST00000418518 BOLA2Q9H3K6 86 aa10.95□□□□□ -0.66
LINCMD1-201ENST00000418518 ZNF330Q9Y3S2 320 aaPredicted RBP10.95□□□□□ -0.66
LINCMD1-201ENST00000418518 CCDC9Q9Y3X0 531 aaKnown RBP10.95□□□□□ -0.66
LINCMD1-201ENST00000418518 SNX14Q9Y5W7 946 aa10.95□□□□□ -0.66
LINCMD1-201ENST00000418518 MYO5AQ9Y4I1 1855 aaKnown RBP10.95□□□□□ -0.66
LINCMD1-201ENST00000418518 PDE8AO60658 829 aa10.94□□□□□ -0.66
LINCMD1-201ENST00000418518 NMIQ13287 307 aaPredicted RBP10.94□□□□□ -0.66
LINCMD1-201ENST00000418518 FAM98CQ17RN3 349 aaKnown RBP10.94□□□□□ -0.66
LINCMD1-201ENST00000418518 CCDC57Q2TAC2 916 aa10.94□□□□□ -0.66
LINCMD1-201ENST00000418518 LRRC24Q50LG9 513 aa10.94□□□□□ -0.66
LINCMD1-201ENST00000418518 PARP10Q53GL7 1025 aa10.94□□□□□ -0.66
LINCMD1-201ENST00000418518 KIAA1211Q6ZU35 1233 aa10.94□□□□□ -0.66
LINCMD1-201ENST00000418518 TTLL11Q8NHH1 800 aa10.94□□□□□ -0.66
LINCMD1-201ENST00000418518 FAM89AQ96GI7 184 aa10.94□□□□□ -0.66
LINCMD1-201ENST00000418518 TTC14Q96N46 770 aa10.94□□□□□ -0.66
LINCMD1-201ENST00000418518 TM6SF1Q9BZW5 370 aa10.94□□□□□ -0.66
LINCMD1-201ENST00000418518 CWC22Q9HCG8 908 aaKnown RBP10.94□□□□□ -0.66
LINCMD1-201ENST00000418518 CHMP3Q9Y3E7 222 aa10.94□□□□□ -0.66
LINCMD1-201ENST00000418518 RPAP1Q9BWH6 1393 aaPredicted RBP10.93□□□□□ -0.66
LINCMD1-201ENST00000418518 SH3TC1Q8TE82 1336 aa10.93□□□□□ -0.66
LINCMD1-201ENST00000418518 A0A0D9SFI3 127 aa10.93□□□□□ -0.66
LINCMD1-201ENST00000418518 IRS4O14654 1257 aaPredicted RBP10.93□□□□□ -0.66
LINCMD1-201ENST00000418518 CYP2E1P05181 493 aaPredicted RBP10.93□□□□□ -0.66
LINCMD1-201ENST00000418518 MCM4P33991 863 aa10.93□□□□□ -0.66
LINCMD1-201ENST00000418518 NEK4P51957 841 aa10.93□□□□□ -0.66
LINCMD1-201ENST00000418518 IFIT5Q13325 482 aaKnown RBP10.93□□□□□ -0.66
LINCMD1-201ENST00000418518 NECTIN1Q15223 517 aa10.93□□□□□ -0.66
LINCMD1-201ENST00000418518 KBTBD3Q8NAB2 608 aa10.93□□□□□ -0.66
LINCMD1-201ENST00000418518 SPRYD3Q8NCJ5 442 aa10.93□□□□□ -0.66
LINCMD1-201ENST00000418518 CERKQ8TCT0 537 aa10.93□□□□□ -0.66
LINCMD1-201ENST00000418518 MAP4K1Q92918 833 aa10.93□□□□□ -0.66
LINCMD1-201ENST00000418518 INTS4Q96HW7 963 aaKnown RBP10.93□□□□□ -0.66
LINCMD1-201ENST00000418518 ZNF594Q96JF6 807 aaPredicted RBP10.93□□□□□ -0.66
LINCMD1-201ENST00000418518 FSD1Q9BTV5 496 aa10.93□□□□□ -0.66
LINCMD1-201ENST00000418518 PUS3Q9BZE2 481 aaKnown RBP10.93□□□□□ -0.66
LINCMD1-201ENST00000418518 CEP126Q9P2H0 1117 aa10.93□□□□□ -0.66
LINCMD1-201ENST00000418518 AKAP2Q9Y2D5 859 aa10.93□□□□□ -0.66
LINCMD1-201ENST00000418518 RIPOR2Q9Y4F9 1068 aa10.93□□□□□ -0.66
LINCMD1-201ENST00000418518 BRWD3Q6RI45 1802 aa10.93□□□□□ -0.66
LINCMD1-201ENST00000418518 UBR3Q6ZT12 1888 aa10.92□□□□□ -0.66
LINCMD1-201ENST00000418518 A0A1B0GUL7 405 aa10.92□□□□□ -0.66
LINCMD1-201ENST00000418518 KCNQ2O43526 872 aa10.92□□□□□ -0.66
LINCMD1-201ENST00000418518 GPTP24298 496 aa10.92□□□□□ -0.66
LINCMD1-201ENST00000418518 PTH1RQ03431 593 aa10.92□□□□□ -0.66
LINCMD1-201ENST00000418518 RC3H1Q5TC82 1133 aaKnown RBP10.92□□□□□ -0.66
LINCMD1-201ENST00000418518 USPL1Q5W0Q7 1092 aa10.92□□□□□ -0.66
LINCMD1-201ENST00000418518 CLEC4GQ6UXB4 293 aa10.92□□□□□ -0.66
LINCMD1-201ENST00000418518 RASEFQ8IZ41 740 aa10.92□□□□□ -0.66
LINCMD1-201ENST00000418518 VGLL2Q8N8G2 317 aa10.92□□□□□ -0.66
LINCMD1-201ENST00000418518 TMX3Q96JJ7 454 aa10.92□□□□□ -0.66
LINCMD1-201ENST00000418518 FAM227BQ96M60 508 aa10.92□□□□□ -0.66
LINCMD1-201ENST00000418518 TRMT112Q9UI30 125 aaKnown RBP10.92□□□□□ -0.66
LINCMD1-201ENST00000418518 USP21Q9UK80 565 aa10.92□□□□□ -0.66
LINCMD1-201ENST00000418518 TBC1D2BQ9UPU7 963 aa10.92□□□□□ -0.66
LINCMD1-201ENST00000418518 ANKRD18BA2A2Z9 1011 aa10.91□□□□□ -0.66
LINCMD1-201ENST00000418518 DDX11L8A8MPP1 907 aa10.91□□□□□ -0.66
LINCMD1-201ENST00000418518 ONECUT3O60422 494 aaPredicted RBP10.91□□□□□ -0.66
LINCMD1-201ENST00000418518 NTSR2O95665 410 aa10.91□□□□□ -0.66
LINCMD1-201ENST00000418518 HSP90AA1P07900 732 aaKnown RBP10.91□□□□□ -0.66
LINCMD1-201ENST00000418518 ITGA6P23229 1130 aa10.91□□□□□ -0.66
LINCMD1-201ENST00000418518 NUCB2P80303 420 aa10.91□□□□□ -0.66
LINCMD1-201ENST00000418518 TSGA10IPQ3SY00 556 aa10.91□□□□□ -0.66
LINCMD1-201ENST00000418518 SYNE4Q8N205 404 aa10.91□□□□□ -0.66
LINCMD1-201ENST00000418518 LINC00116Q8NCU8 138 aa10.91□□□□□ -0.66
LINCMD1-201ENST00000418518 TNPO1Q92973 898 aaKnown RBP10.91□□□□□ -0.66
LINCMD1-201ENST00000418518 ZNF512BQ96KM6 892 aaPredicted RBP10.91□□□□□ -0.66
LINCMD1-201ENST00000418518 HMG20BQ9P0W2 317 aa10.91□□□□□ -0.66
LINCMD1-201ENST00000418518 RBM8AQ9Y5S9 174 aaKnown RBP10.91□□□□□ -0.66
LINCMD1-201ENST00000418518 TAF5LO75529 589 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 115.4 ms