RNA–Protein interactions for RNA: ENST00000418107.2

HLA-DMB-258, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

APPRIS P1 BASIC

Gene HLA-DMB, Length 1,397 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-258ENST00000418107 CLEC11AQ9Y240 323 aa16.61■□□□□ 0.25
HLA-DMB-258ENST00000418107 PTPRCP08575 1304 aa16.61■□□□□ 0.25
HLA-DMB-258ENST00000418107 RGL2O15211 777 aa16.6■□□□□ 0.25
HLA-DMB-258ENST00000418107 EPHX2P34913 555 aa16.6■□□□□ 0.25
HLA-DMB-258ENST00000418107 IARSP41252 1262 aaKnown RBP16.6■□□□□ 0.25
HLA-DMB-258ENST00000418107 SYNE4Q8N205 404 aa16.6■□□□□ 0.25
HLA-DMB-258ENST00000418107 GTF2E1P29083 439 aaPredicted RBP16.59■□□□□ 0.25
HLA-DMB-258ENST00000418107 AIDAQ96BJ3 306 aa16.59■□□□□ 0.25
HLA-DMB-258ENST00000418107 FZD9O00144 591 aa16.58■□□□□ 0.24
HLA-DMB-258ENST00000418107 ALDH1B1P30837 517 aa16.58■□□□□ 0.24
HLA-DMB-258ENST00000418107 PRDM10Q9NQV6 1147 aa16.58■□□□□ 0.24
HLA-DMB-258ENST00000418107 ADAMTSL1Q8N6G6 1762 aa16.58■□□□□ 0.24
HLA-DMB-258ENST00000418107 ABCC12Q96J65 1359 aa16.58■□□□□ 0.24
HLA-DMB-258ENST00000418107 CTCFP49711 727 aaPredicted RBP16.57■□□□□ 0.24
HLA-DMB-258ENST00000418107 FKBP5Q13451 457 aaPredicted RBP16.57■□□□□ 0.24
HLA-DMB-258ENST00000418107 MAP1SQ66K74 1059 aaPredicted RBP16.57■□□□□ 0.24
HLA-DMB-258ENST00000418107 G2E3Q7L622 706 aa16.57■□□□□ 0.24
HLA-DMB-258ENST00000418107 PNMA8AQ86V59 439 aaPredicted RBP16.57■□□□□ 0.24
HLA-DMB-258ENST00000418107 NUTM1Q86Y26 1132 aa16.57■□□□□ 0.24
HLA-DMB-258ENST00000418107 CNTROBQ8N137 903 aa16.57■□□□□ 0.24
HLA-DMB-258ENST00000418107 SNED1Q8TER0 1413 aa16.57■□□□□ 0.24
HLA-DMB-258ENST00000418107 FLIIQ13045 1269 aa16.56■□□□□ 0.24
HLA-DMB-258ENST00000418107 GPC2Q8N158 579 aa16.56■□□□□ 0.24
HLA-DMB-258ENST00000418107 ABCC4O15439 1325 aa16.56■□□□□ 0.24
HLA-DMB-258ENST00000418107 CRY2Q49AN0 593 aa16.55■□□□□ 0.24
HLA-DMB-258ENST00000418107 JDP2Q8WYK2 163 aa16.55■□□□□ 0.24
HLA-DMB-258ENST00000418107 PSMD1Q99460 953 aa16.55■□□□□ 0.24
HLA-DMB-258ENST00000418107 WBP1LQ9NX94 342 aa16.55■□□□□ 0.24
HLA-DMB-258ENST00000418107 CHPF2Q9P2E5 772 aa16.55■□□□□ 0.24
HLA-DMB-258ENST00000418107 COL4A5P29400 1685 aa16.54■□□□□ 0.24
HLA-DMB-258ENST00000418107 RASSF10A6NK89 507 aa16.54■□□□□ 0.24
HLA-DMB-258ENST00000418107 LBX1P52954 281 aa16.54■□□□□ 0.24
HLA-DMB-258ENST00000418107 SLC4A10Q6U841 1118 aa16.54■□□□□ 0.24
HLA-DMB-258ENST00000418107 NYXQ9GZU5 481 aa16.54■□□□□ 0.24
HLA-DMB-258ENST00000418107 DBF4Q9UBU7 674 aaPredicted RBP16.54■□□□□ 0.24
HLA-DMB-258ENST00000418107 GJA3Q9Y6H8 435 aa16.54■□□□□ 0.24
HLA-DMB-258ENST00000418107 DEFB115Q30KQ5 88 aa16.53■□□□□ 0.24
HLA-DMB-258ENST00000418107 TTLL7Q6ZT98 887 aa16.53■□□□□ 0.24
HLA-DMB-258ENST00000418107 CENPQQ7L2Z9 268 aaPredicted RBP16.53■□□□□ 0.24
HLA-DMB-258ENST00000418107 SLC51AQ86UW1 340 aa16.53■□□□□ 0.24
HLA-DMB-258ENST00000418107 MAP3K15Q6ZN16 1313 aa16.53■□□□□ 0.24
HLA-DMB-258ENST00000418107 ERVV-1B6SEH8 477 aa16.52■□□□□ 0.24
HLA-DMB-258ENST00000418107 F6X3S4 739 aa16.52■□□□□ 0.24
HLA-DMB-258ENST00000418107 GPTP24298 496 aa16.52■□□□□ 0.24
HLA-DMB-258ENST00000418107 EIF6P56537 245 aaKnown RBP16.52■□□□□ 0.24
HLA-DMB-258ENST00000418107 RPGRQ92834 1020 aaKnown RBP16.52■□□□□ 0.24
HLA-DMB-258ENST00000418107 RWDD1Q9H446 243 aaPredicted RBP16.52■□□□□ 0.24
HLA-DMB-258ENST00000418107 ABT1Q9ULW3 272 aaKnown RBP16.52■□□□□ 0.24
HLA-DMB-258ENST00000418107 UBN2Q6ZU65 1347 aa16.52■□□□□ 0.23
HLA-DMB-258ENST00000418107 ANXA1P04083 346 aa16.51■□□□□ 0.23
HLA-DMB-258ENST00000418107 CCT4P50991 539 aaKnown RBP16.51■□□□□ 0.23
HLA-DMB-258ENST00000418107 INTS3Q68E01 1043 aaKnown RBP16.51■□□□□ 0.23
HLA-DMB-258ENST00000418107 CC2D2BQ6DHV5 1058 aa16.51■□□□□ 0.23
HLA-DMB-258ENST00000418107 KIF6Q6ZMV9 814 aa16.51■□□□□ 0.23
HLA-DMB-258ENST00000418107 PHAXQ9H814 394 aaKnown RBP16.51■□□□□ 0.23
HLA-DMB-258ENST00000418107 HYPKQ9NX55 129 aa16.51■□□□□ 0.23
HLA-DMB-258ENST00000418107 LTBP1Q14766 1721 aa16.51■□□□□ 0.23
HLA-DMB-258ENST00000418107 WDR33Q9C0J8 1336 aaKnown RBP16.51■□□□□ 0.23
HLA-DMB-258ENST00000418107 HSPA8P11142 646 aaKnown RBP16.51■□□□□ 0.23
HLA-DMB-258ENST00000418107 MYL6BP14649 208 aa16.51■□□□□ 0.23
HLA-DMB-258ENST00000418107 LMOD1P29536 600 aaPredicted RBP16.51■□□□□ 0.23
HLA-DMB-258ENST00000418107 HOXA10P31260 410 aaPredicted RBP16.51■□□□□ 0.23
HLA-DMB-258ENST00000418107 FMR1Q06787 632 aaKnown RBP eCLIP16.51■□□□□ 0.23
HLA-DMB-258ENST00000418107 LARGE2Q8N3Y3 721 aa16.51■□□□□ 0.23
HLA-DMB-258ENST00000418107 ZBTB3Q9H5J0 574 aa16.51■□□□□ 0.23
HLA-DMB-258ENST00000418107 DDX21Q9NR30 783 aaKnown RBP eCLIP16.51■□□□□ 0.23
HLA-DMB-258ENST00000418107 EPS15P42566 896 aa16.5■□□□□ 0.23
HLA-DMB-258ENST00000418107 SCNN1DP51172 638 aa16.5■□□□□ 0.23
HLA-DMB-258ENST00000418107 SUSD4Q5VX71 490 aa16.5■□□□□ 0.23
HLA-DMB-258ENST00000418107 ZBTB40Q9NUA8 1239 aa16.5■□□□□ 0.23
HLA-DMB-258ENST00000418107 PCDHB15Q9Y5E8 787 aa16.5■□□□□ 0.23
HLA-DMB-258ENST00000418107 RIC1Q4ADV7 1423 aa16.49■□□□□ 0.23
HLA-DMB-258ENST00000418107 NUP98P52948 1817 aa16.49■□□□□ 0.23
HLA-DMB-258ENST00000418107 IBTKQ9P2D0 1353 aaPredicted RBP16.49■□□□□ 0.23
HLA-DMB-258ENST00000418107 PPEF1O14829 653 aaPredicted RBP16.49■□□□□ 0.23
HLA-DMB-258ENST00000418107 ZBTB7BO15156 539 aaPredicted RBP16.49■□□□□ 0.23
HLA-DMB-258ENST00000418107 C3orf67Q6ZVT6 689 aa16.49■□□□□ 0.23
HLA-DMB-258ENST00000418107 DDX58O95786 925 aaKnown RBP16.48■□□□□ 0.23
HLA-DMB-258ENST00000418107 MAP2K1Q02750 393 aaPredicted RBP16.48■□□□□ 0.23
HLA-DMB-258ENST00000418107 RBM17Q96I25 401 aaKnown RBP16.48■□□□□ 0.23
HLA-DMB-258ENST00000418107 CRAMP1Q96RY5 1269 aa16.48■□□□□ 0.23
HLA-DMB-258ENST00000418107 NTSR2O95665 410 aa16.47■□□□□ 0.23
HLA-DMB-258ENST00000418107 IGHDP01880 384 aa16.47■□□□□ 0.23
HLA-DMB-258ENST00000418107 AIMP1Q12904 312 aaKnown RBP16.47■□□□□ 0.23
HLA-DMB-258ENST00000418107 PROSER3Q2NL68 480 aa16.47■□□□□ 0.23
HLA-DMB-258ENST00000418107 GRIPAP1Q4V328 841 aa16.47■□□□□ 0.23
HLA-DMB-258ENST00000418107 PAXIP1Q6ZW49 1069 aaPredicted RBP16.47■□□□□ 0.23
HLA-DMB-258ENST00000418107 ZNF34Q8IZ26 560 aa16.47■□□□□ 0.23
HLA-DMB-258ENST00000418107 TRAF5O00463 557 aa16.46■□□□□ 0.23
HLA-DMB-258ENST00000418107 PPIP5K2O43314 1243 aa16.46■□□□□ 0.23
HLA-DMB-258ENST00000418107 GRM1Q13255 1194 aa16.46■□□□□ 0.23
HLA-DMB-258ENST00000418107 NIM1KQ8IY84 436 aa16.46■□□□□ 0.23
HLA-DMB-258ENST00000418107 CAPNS2Q96L46 248 aa16.46■□□□□ 0.23
HLA-DMB-258ENST00000418107 C1orf115Q9H7X2 142 aa16.46■□□□□ 0.23
HLA-DMB-258ENST00000418107 PI4KAP2A4QPH2 592 aa16.45■□□□□ 0.22
HLA-DMB-258ENST00000418107 AOC3Q16853 763 aa16.45■□□□□ 0.22
HLA-DMB-258ENST00000418107 GIGYF2Q6Y7W6 1299 aaKnown RBP16.45■□□□□ 0.22
HLA-DMB-258ENST00000418107 USP50Q70EL3 339 aaPredicted RBP16.45■□□□□ 0.22
HLA-DMB-258ENST00000418107 PI4KAP1Q8N8J0 262 aa16.45■□□□□ 0.22
HLA-DMB-258ENST00000418107 DNAAF4Q8WXU2 420 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms