RNA–Protein interactions for RNA: ENST00000417628.6

ECHDC1-206, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-206ENST00000417628 POTECB2RU33 542 aa7.89□□□□□ -1.15
ECHDC1-206ENST00000417628 WASLO00401 505 aaPredicted RBP7.89□□□□□ -1.15
ECHDC1-206ENST00000417628 CA12O43570 354 aa7.89□□□□□ -1.15
ECHDC1-206ENST00000417628 NR6A1Q15406 480 aa7.89□□□□□ -1.15
ECHDC1-206ENST00000417628 HDGFL1Q5TGJ6 251 aa7.89□□□□□ -1.15
ECHDC1-206ENST00000417628 TOGARAM1Q9Y4F4 1720 aa7.89□□□□□ -1.15
ECHDC1-206ENST00000417628 SOWAHBA6NEL2 793 aa7.88□□□□□ -1.15
ECHDC1-206ENST00000417628 MMP10P09238 476 aa7.88□□□□□ -1.15
ECHDC1-206ENST00000417628 IL2RBP14784 551 aa7.88□□□□□ -1.15
ECHDC1-206ENST00000417628 VAC14Q08AM6 782 aa7.88□□□□□ -1.15
ECHDC1-206ENST00000417628 WASHC4Q2M389 1173 aa7.88□□□□□ -1.15
ECHDC1-206ENST00000417628 Q3C1V9 767 aa7.88□□□□□ -1.15
ECHDC1-206ENST00000417628 DESI1Q6ICB0 168 aa7.88□□□□□ -1.15
ECHDC1-206ENST00000417628 BLOC1S3Q6QNY0 202 aa7.88□□□□□ -1.15
ECHDC1-206ENST00000417628 RNF19BQ6ZMZ0 732 aa7.88□□□□□ -1.15
ECHDC1-206ENST00000417628 SMIM5Q71RC9 77 aa7.88□□□□□ -1.15
ECHDC1-206ENST00000417628 NECTIN2Q92692 538 aa7.88□□□□□ -1.15
ECHDC1-206ENST00000417628 USP47Q96K76 1375 aa7.87□□□□□ -1.15
ECHDC1-206ENST00000417628 DOT1LQ8TEK3 1739 aa7.87□□□□□ -1.15
ECHDC1-206ENST00000417628 ACEP12821 1306 aa7.87□□□□□ -1.15
ECHDC1-206ENST00000417628 PDIA4P13667 645 aaKnown RBP7.87□□□□□ -1.15
ECHDC1-206ENST00000417628 BCAMP50895 628 aa7.87□□□□□ -1.15
ECHDC1-206ENST00000417628 RASSF7Q02833 373 aa7.87□□□□□ -1.15
ECHDC1-206ENST00000417628 FAM50AQ14320 339 aaKnown RBP7.87□□□□□ -1.15
ECHDC1-206ENST00000417628 DALRD3Q5D0E6 543 aaKnown RBP7.87□□□□□ -1.15
ECHDC1-206ENST00000417628 BRICD5Q6PL45 260 aa7.87□□□□□ -1.15
ECHDC1-206ENST00000417628 POTEGQ6S5H5 508 aa7.87□□□□□ -1.15
ECHDC1-206ENST00000417628 ANKK1Q8NFD2 765 aa7.87□□□□□ -1.15
ECHDC1-206ENST00000417628 PODXL2Q9NZ53 605 aa7.87□□□□□ -1.15
ECHDC1-206ENST00000417628 PIM2Q9P1W9 311 aa7.87□□□□□ -1.15
ECHDC1-206ENST00000417628 ABT1Q9ULW3 272 aaKnown RBP7.87□□□□□ -1.15
ECHDC1-206ENST00000417628 HPS5Q9UPZ3 1129 aa7.87□□□□□ -1.15
ECHDC1-206ENST00000417628 POTEMA6NI47 508 aa7.86□□□□□ -1.15
ECHDC1-206ENST00000417628 LMNB1P20700 586 aa7.86□□□□□ -1.15
ECHDC1-206ENST00000417628 ECE1P42892 770 aa7.86□□□□□ -1.15
ECHDC1-206ENST00000417628 PPP4CP60510 307 aa7.86□□□□□ -1.15
ECHDC1-206ENST00000417628 LYPD8Q6UX82 237 aa7.86□□□□□ -1.15
ECHDC1-206ENST00000417628 ANKRD13DQ6ZTN6 518 aa7.86□□□□□ -1.15
ECHDC1-206ENST00000417628 LDHDQ86WU2 507 aa7.86□□□□□ -1.15
ECHDC1-206ENST00000417628 PRR14Q9BWN1 585 aa7.86□□□□□ -1.15
ECHDC1-206ENST00000417628 C4BP0C0L5 1744 aa7.86□□□□□ -1.15
ECHDC1-206ENST00000417628 SBF1O95248 1867 aa7.85□□□□□ -1.15
ECHDC1-206ENST00000417628 MEGF6O75095 1541 aa7.85□□□□□ -1.15
ECHDC1-206ENST00000417628 KCNA3P22001 575 aa7.85□□□□□ -1.15
ECHDC1-206ENST00000417628 AMIGO3Q86WK7 504 aa7.85□□□□□ -1.15
ECHDC1-206ENST00000417628 NUDT16Q96DE0 195 aaKnown RBP7.85□□□□□ -1.15
ECHDC1-206ENST00000417628 THAP11Q96EK4 314 aa7.85□□□□□ -1.15
ECHDC1-206ENST00000417628 CAPNS2Q96L46 248 aa7.85□□□□□ -1.15
ECHDC1-206ENST00000417628 ANP32EQ9BTT0 268 aa7.85□□□□□ -1.15
ECHDC1-206ENST00000417628 ALG2Q9H553 416 aa7.85□□□□□ -1.15
ECHDC1-206ENST00000417628 CCDC87Q9NVE4 849 aa7.85□□□□□ -1.15
ECHDC1-206ENST00000417628 SALL2Q9Y467 1007 aaPredicted RBP7.85□□□□□ -1.15
ECHDC1-206ENST00000417628 GOLGA8CPA6NN73 597 aa7.84□□□□□ -1.15
ECHDC1-206ENST00000417628 SSFA2P28290 1259 aa7.84□□□□□ -1.15
ECHDC1-206ENST00000417628 SCUBE3Q8IX30 993 aa7.84□□□□□ -1.15
ECHDC1-206ENST00000417628 GPR101Q96P66 508 aaPredicted RBP7.84□□□□□ -1.15
ECHDC1-206ENST00000417628 USB1Q9BQ65 265 aaKnown RBP7.84□□□□□ -1.15
ECHDC1-206ENST00000417628 C14orf93Q9H972 538 aaKnown RBP7.84□□□□□ -1.15
ECHDC1-206ENST00000417628 TSR3Q9UJK0 312 aaKnown RBP7.84□□□□□ -1.15
ECHDC1-206ENST00000417628 ITGBL1O95965 494 aaPredicted RBP7.83□□□□□ -1.16
ECHDC1-206ENST00000417628 GRM1Q13255 1194 aa7.83□□□□□ -1.16
ECHDC1-206ENST00000417628 DDX54Q8TDD1 881 aaKnown RBP7.83□□□□□ -1.16
ECHDC1-206ENST00000417628 WNT2BQ93097 391 aa7.83□□□□□ -1.16
ECHDC1-206ENST00000417628 STAC3Q96MF2 364 aa7.83□□□□□ -1.16
ECHDC1-206ENST00000417628 TRAIPQ9BWF2 469 aa7.83□□□□□ -1.16
ECHDC1-206ENST00000417628 UBR3Q6ZT12 1888 aa7.83□□□□□ -1.16
ECHDC1-206ENST00000417628 CFAP70Q5T0N1 1121 aa7.82□□□□□ -1.16
ECHDC1-206ENST00000417628 ARHGEF25Q86VW2 580 aa7.82□□□□□ -1.16
ECHDC1-206ENST00000417628 RETREG2Q8NC44 543 aa7.82□□□□□ -1.16
ECHDC1-206ENST00000417628 UBE2Q2Q8WVN8 375 aa7.82□□□□□ -1.16
ECHDC1-206ENST00000417628 PCDHB3Q9Y5E6 796 aa7.82□□□□□ -1.16
ECHDC1-206ENST00000417628 TAF1LQ8IZX4 1826 aa7.82□□□□□ -1.16
ECHDC1-206ENST00000417628 RGPD5Q99666 1765 aa7.82□□□□□ -1.16
ECHDC1-206ENST00000417628 C4AP0C0L4 1744 aa7.81□□□□□ -1.16
ECHDC1-206ENST00000417628 FMNL1O95466 1100 aaPredicted RBP7.81□□□□□ -1.16
ECHDC1-206ENST00000417628 F12P00748 615 aaPredicted RBP7.81□□□□□ -1.16
ECHDC1-206ENST00000417628 MAP2K2P36507 400 aa7.81□□□□□ -1.16
ECHDC1-206ENST00000417628 SRPK2P78362 688 aaKnown RBP7.81□□□□□ -1.16
ECHDC1-206ENST00000417628 CYP4F22Q6NT55 531 aa7.81□□□□□ -1.16
ECHDC1-206ENST00000417628 UCN2Q96RP3 112 aa7.81□□□□□ -1.16
ECHDC1-206ENST00000417628 KRTAP3-3Q9BYR6 98 aa7.81□□□□□ -1.16
ECHDC1-206ENST00000417628 KRTAP3-2Q9BYR7 98 aa7.81□□□□□ -1.16
ECHDC1-206ENST00000417628 NLRP2Q9NX02 1062 aa7.81□□□□□ -1.16
ECHDC1-206ENST00000417628 PALLDQ8WX93 1383 aa7.81□□□□□ -1.16
ECHDC1-206ENST00000417628 CLSPNQ9HAW4 1339 aa7.8□□□□□ -1.16
ECHDC1-206ENST00000417628 IQCA1LA6NCM1 817 aa7.8□□□□□ -1.16
ECHDC1-206ENST00000417628 NR1I2O75469 434 aa7.8□□□□□ -1.16
ECHDC1-206ENST00000417628 JUNDP17535 347 aa7.8□□□□□ -1.16
ECHDC1-206ENST00000417628 RGL3Q3MIN7 710 aa7.8□□□□□ -1.16
ECHDC1-206ENST00000417628 CDAN1Q8IWY9 1227 aa7.8□□□□□ -1.16
ECHDC1-206ENST00000417628 PPP1R12CQ9BZL4 782 aa7.8□□□□□ -1.16
ECHDC1-206ENST00000417628 FAM160A2Q8N612 972 aaPredicted RBP7.79□□□□□ -1.16
ECHDC1-206ENST00000417628 TRAK1Q9UPV9 953 aa7.79□□□□□ -1.16
ECHDC1-206ENST00000417628 CASP8AP2Q9UKL3 1982 aa7.79□□□□□ -1.16
ECHDC1-206ENST00000417628 KAT6BQ8WYB5 2073 aa7.79□□□□□ -1.16
ECHDC1-206ENST00000417628 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.78□□□□□ -1.16
ECHDC1-206ENST00000417628 PALM3A6NDB9 673 aaPredicted RBP7.78□□□□□ -1.16
ECHDC1-206ENST00000417628 AOC2O75106 756 aa7.78□□□□□ -1.16
ECHDC1-206ENST00000417628 RFX1P22670 979 aa7.78□□□□□ -1.16
ECHDC1-206ENST00000417628 SOX11P35716 441 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms