RNA–Protein interactions for RNA: ENST00000413219.6

SDCBP-202, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SDCBP, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-202ENST00000413219 PLEKHO1Q53GL0 409 aaPredicted RBP20.82■□□□□ 0.92
SDCBP-202ENST00000413219 TFIP11Q9UBB9 837 aaKnown RBP20.82■□□□□ 0.92
SDCBP-202ENST00000413219 NFAT5O94916 1531 aa20.82■□□□□ 0.92
SDCBP-202ENST00000413219 SARM1Q6SZW1 724 aa20.82■□□□□ 0.92
SDCBP-202ENST00000413219 SUCLG2Q96I99 432 aa20.82■□□□□ 0.92
SDCBP-202ENST00000413219 ZSCAN16Q9H4T2 348 aaPredicted RBP20.82■□□□□ 0.92
SDCBP-202ENST00000413219 RESTQ13127 1097 aa20.81■□□□□ 0.92
SDCBP-202ENST00000413219 ZNF530Q6P9A1 599 aaPredicted RBP20.81■□□□□ 0.92
SDCBP-202ENST00000413219 GTF3C6Q969F1 213 aa20.81■□□□□ 0.92
SDCBP-202ENST00000413219 PGBD1Q96JS3 809 aa20.81■□□□□ 0.92
SDCBP-202ENST00000413219 NR1I2O75469 434 aa20.81■□□□□ 0.92
SDCBP-202ENST00000413219 NCBP1Q09161 790 aaKnown RBP20.81■□□□□ 0.92
SDCBP-202ENST00000413219 COL9A3Q14050 684 aaPredicted RBP20.81■□□□□ 0.92
SDCBP-202ENST00000413219 AMOTQ4VCS5 1084 aa20.81■□□□□ 0.92
SDCBP-202ENST00000413219 BICD2Q8TD16 824 aa20.81■□□□□ 0.92
SDCBP-202ENST00000413219 KAZALD1Q96I82 304 aa20.81■□□□□ 0.92
SDCBP-202ENST00000413219 RFX7Q2KHR2 1363 aa20.8■□□□□ 0.92
SDCBP-202ENST00000413219 NEMFO60524 1076 aa20.8■□□□□ 0.92
SDCBP-202ENST00000413219 KIF20AO95235 890 aa20.8■□□□□ 0.92
SDCBP-202ENST00000413219 DDX58O95786 925 aaKnown RBP20.8■□□□□ 0.92
SDCBP-202ENST00000413219 LRMPQ12912 555 aa20.8■□□□□ 0.92
SDCBP-202ENST00000413219 CWF19L2Q2TBE0 894 aaKnown RBP20.8■□□□□ 0.92
SDCBP-202ENST00000413219 CCDC8Q9H0W5 538 aaPredicted RBP20.8■□□□□ 0.92
SDCBP-202ENST00000413219 PHRF1Q9P1Y6 1649 aaKnown RBP20.8■□□□□ 0.92
SDCBP-202ENST00000413219 RNMTO43148 476 aaKnown RBP20.79■□□□□ 0.92
SDCBP-202ENST00000413219 TAF5LO75529 589 aa20.79■□□□□ 0.92
SDCBP-202ENST00000413219 TNNT1P13805 278 aa20.79■□□□□ 0.92
SDCBP-202ENST00000413219 BICC1Q9H694 974 aaKnown RBP20.79■□□□□ 0.92
SDCBP-202ENST00000413219 CLIP2Q9UDT6 1046 aa20.79■□□□□ 0.92
SDCBP-202ENST00000413219 NRBP1Q9UHY1 535 aa20.79■□□□□ 0.92
SDCBP-202ENST00000413219 CFAP45Q9UL16 551 aa20.79■□□□□ 0.92
SDCBP-202ENST00000413219 CTAGE5O15320 804 aa20.79■□□□□ 0.92
SDCBP-202ENST00000413219 DNAJC25Q9H1X3 360 aa20.79■□□□□ 0.92
SDCBP-202ENST00000413219 BOLA2Q9H3K6 86 aa20.79■□□□□ 0.92
SDCBP-202ENST00000413219 PROSER3Q2NL68 480 aa20.78■□□□□ 0.92
SDCBP-202ENST00000413219 C16orf45Q96MC5 204 aaPredicted RBP20.78■□□□□ 0.92
SDCBP-202ENST00000413219 TCEANC2Q96MN5 208 aa20.78■□□□□ 0.92
SDCBP-202ENST00000413219 TLR7Q9NYK1 1049 aaKnown RBP20.78■□□□□ 0.92
SDCBP-202ENST00000413219 OGFRQ9NZT2 677 aa20.78■□□□□ 0.92
SDCBP-202ENST00000413219 TAF6LQ9Y6J9 622 aa20.78■□□□□ 0.92
SDCBP-202ENST00000413219 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.78■□□□□ 0.92
SDCBP-202ENST00000413219 ZNF589Q86UQ0 364 aaPredicted RBP20.77■□□□□ 0.92
SDCBP-202ENST00000413219 MRFAP1L1Q96HT8 127 aa20.77■□□□□ 0.92
SDCBP-202ENST00000413219 U2AF2P26368 475 aaKnown RBP eCLIP20.77■□□□□ 0.92
SDCBP-202ENST00000413219 MPRIPQ6WCQ1 1025 aa20.77■□□□□ 0.92
SDCBP-202ENST00000413219 CACTINQ8WUQ7 758 aaKnown RBP20.77■□□□□ 0.92
SDCBP-202ENST00000413219 BRF1Q92994 677 aa20.77■□□□□ 0.92
SDCBP-202ENST00000413219 CGNQ9P2M7 1197 aaKnown RBP20.77■□□□□ 0.92
SDCBP-202ENST00000413219 STK3Q13188 491 aa20.76■□□□□ 0.91
SDCBP-202ENST00000413219 IQCB1Q15051 598 aa20.76■□□□□ 0.91
SDCBP-202ENST00000413219 CCDC112Q8NEF3 446 aa20.76■□□□□ 0.91
SDCBP-202ENST00000413219 NEK1Q96PY6 1258 aa20.76■□□□□ 0.91
SDCBP-202ENST00000413219 LLPHQ9BRT6 129 aaKnown RBP20.76■□□□□ 0.91
SDCBP-202ENST00000413219 LMTK3Q96Q04 1460 aa20.76■□□□□ 0.91
SDCBP-202ENST00000413219 RBM6P78332 1123 aaKnown RBP20.76■□□□□ 0.91
SDCBP-202ENST00000413219 DDX21Q9NR30 783 aaKnown RBP eCLIP20.76■□□□□ 0.91
SDCBP-202ENST00000413219 U3KPZ7 1027 aaPredicted RBP20.76■□□□□ 0.91
SDCBP-202ENST00000413219 GOLGA6L19H0YKK7 550 aa20.75■□□□□ 0.91
SDCBP-202ENST00000413219 C1orf141Q5JVX7 400 aa20.75■□□□□ 0.91
SDCBP-202ENST00000413219 KCNH5Q8NCM2 988 aa20.75■□□□□ 0.91
SDCBP-202ENST00000413219 ZHX1Q9UKY1 873 aaPredicted RBP20.75■□□□□ 0.91
SDCBP-202ENST00000413219 SPDYE4A6NLX3 237 aa20.74■□□□□ 0.91
SDCBP-202ENST00000413219 H3BQV1 296 aa20.74■□□□□ 0.91
SDCBP-202ENST00000413219 JAK2O60674 1132 aa20.74■□□□□ 0.91
SDCBP-202ENST00000413219 ATP5JP18859 108 aa20.74■□□□□ 0.91
SDCBP-202ENST00000413219 STX1AQ16623 288 aa20.74■□□□□ 0.91
SDCBP-202ENST00000413219 TPD52L1Q16890 204 aaPredicted RBP20.74■□□□□ 0.91
SDCBP-202ENST00000413219 IFFO2Q5TF58 517 aa20.74■□□□□ 0.91
SDCBP-202ENST00000413219 SMARCC2Q8TAQ2 1214 aa20.74■□□□□ 0.91
SDCBP-202ENST00000413219 CCDC144BQ3MJ40 725 aa20.74■□□□□ 0.91
SDCBP-202ENST00000413219 ATL3Q6DD88 541 aa20.74■□□□□ 0.91
SDCBP-202ENST00000413219 NAA16Q6N069 864 aaPredicted RBP20.74■□□□□ 0.91
SDCBP-202ENST00000413219 C14orf37Q86TY3 774 aa20.74■□□□□ 0.91
SDCBP-202ENST00000413219 CCDC144CPQ8IYA2 1237 aa20.74■□□□□ 0.91
SDCBP-202ENST00000413219 CTNNA3Q9UI47 895 aa20.74■□□□□ 0.91
SDCBP-202ENST00000413219 PHF8Q9UPP1 1060 aa20.74■□□□□ 0.91
SDCBP-202ENST00000413219 LRRC8AQ8IWT6 810 aa20.73■□□□□ 0.91
SDCBP-202ENST00000413219 RCOR1Q9UKL0 485 aa20.73■□□□□ 0.91
SDCBP-202ENST00000413219 PXDNQ92626 1479 aa20.73■□□□□ 0.91
SDCBP-202ENST00000413219 CEP135Q66GS9 1140 aa20.72■□□□□ 0.91
SDCBP-202ENST00000413219 Q6ZUG5 572 aa20.72■□□□□ 0.91
SDCBP-202ENST00000413219 THEMISQ8N1K5 641 aaPredicted RBP20.72■□□□□ 0.91
SDCBP-202ENST00000413219 KCNA6P17658 529 aa20.71■□□□□ 0.91
SDCBP-202ENST00000413219 SIL1Q9H173 461 aa20.71■□□□□ 0.91
SDCBP-202ENST00000413219 KCND1Q9NSA2 647 aa20.71■□□□□ 0.91
SDCBP-202ENST00000413219 SIPA1L3O60292 1781 aaPredicted RBP20.71■□□□□ 0.91
SDCBP-202ENST00000413219 PFKFB2O60825 505 aa20.71■□□□□ 0.91
SDCBP-202ENST00000413219 IGKV5-2P06315 115 aa20.71■□□□□ 0.91
SDCBP-202ENST00000413219 HMGB1P09429 215 aaKnown RBP20.71■□□□□ 0.91
SDCBP-202ENST00000413219 ADD1P35611 737 aaKnown RBP20.71■□□□□ 0.91
SDCBP-202ENST00000413219 COPRSQ9NQ92 184 aa20.71■□□□□ 0.91
SDCBP-202ENST00000413219 COL15A1P39059 1388 aa20.71■□□□□ 0.91
SDCBP-202ENST00000413219 RGPD2P0DJD1 1756 aa20.7■□□□□ 0.9
SDCBP-202ENST00000413219 HSP90B1P14625 803 aaKnown RBP20.69■□□□□ 0.9
SDCBP-202ENST00000413219 PDIA6Q15084 440 aa20.69■□□□□ 0.9
SDCBP-202ENST00000413219 C11orf57Q6ZUT1 292 aaPredicted RBP20.69■□□□□ 0.9
SDCBP-202ENST00000413219 DDX41Q9UJV9 622 aaKnown RBP20.69■□□□□ 0.9
SDCBP-202ENST00000413219 GABPB1Q06547 395 aaPredicted RBP20.69■□□□□ 0.9
SDCBP-202ENST00000413219 NEXNQ0ZGT2 675 aa20.69■□□□□ 0.9
SDCBP-202ENST00000413219 CCDC73Q6ZRK6 1079 aa20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms