RNA–Protein interactions for RNA: ENST00000412847.5

PTPRN-203, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 4

Gene PTPRN, Length 563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-203ENST00000412847 HHIPL1Q96JK4 782 aa17.06■□□□□ 0.32
PTPRN-203ENST00000412847 RTFDC1Q9BY42 306 aaPredicted RBP17.06■□□□□ 0.32
PTPRN-203ENST00000412847 MAPK8IP3Q9UPT6 1336 aa17.05■□□□□ 0.32
PTPRN-203ENST00000412847 RGS19P49795 217 aa17.05■□□□□ 0.32
PTPRN-203ENST00000412847 BRPF1P55201 1214 aaPredicted RBP17.05■□□□□ 0.32
PTPRN-203ENST00000412847 PLEKHF1Q96S99 279 aa17.05■□□□□ 0.32
PTPRN-203ENST00000412847 BCL2L13Q9BXK5 485 aa17.05■□□□□ 0.32
PTPRN-203ENST00000412847 ZNF408Q9H9D4 720 aa17.05■□□□□ 0.32
PTPRN-203ENST00000412847 KIAA2012Q0VF49 1180 aa17.04■□□□□ 0.32
PTPRN-203ENST00000412847 LRP10Q7Z4F1 713 aa17.04■□□□□ 0.32
PTPRN-203ENST00000412847 SP8Q8IXZ3 490 aa17.04■□□□□ 0.32
PTPRN-203ENST00000412847 MPNDQ8N594 471 aa17.04■□□□□ 0.32
PTPRN-203ENST00000412847 PGAP2Q9UHJ9 254 aa17.04■□□□□ 0.32
PTPRN-203ENST00000412847 TSPYL4Q9UJ04 414 aa17.04■□□□□ 0.32
PTPRN-203ENST00000412847 SCN9AQ15858 1988 aa17.04■□□□□ 0.32
PTPRN-203ENST00000412847 BBOX1O75936 387 aa17.03■□□□□ 0.32
PTPRN-203ENST00000412847 TNIP1Q15025 636 aa17.03■□□□□ 0.32
PTPRN-203ENST00000412847 ZC3H15Q8WU90 426 aaKnown RBP17.03■□□□□ 0.32
PTPRN-203ENST00000412847 RAD17O75943 681 aa17.02■□□□□ 0.32
PTPRN-203ENST00000412847 PDIA6Q15084 440 aa17.02■□□□□ 0.32
PTPRN-203ENST00000412847 HSP90AB3PQ58FF7 597 aa17.02■□□□□ 0.32
PTPRN-203ENST00000412847 CDC37L1Q7L3B6 337 aa17.02■□□□□ 0.32
PTPRN-203ENST00000412847 TRPM4Q8TD43 1214 aa17.02■□□□□ 0.32
PTPRN-203ENST00000412847 CFAP44Q96MT7 982 aa17.02■□□□□ 0.32
PTPRN-203ENST00000412847 MCOLN1Q9GZU1 580 aa17.02■□□□□ 0.32
PTPRN-203ENST00000412847 ANXA1P04083 346 aa17.01■□□□□ 0.31
PTPRN-203ENST00000412847 EIF2S2P20042 333 aaKnown RBP17.01■□□□□ 0.31
PTPRN-203ENST00000412847 HIRAP54198 1017 aaPredicted RBP17.01■□□□□ 0.31
PTPRN-203ENST00000412847 PROSER3Q2NL68 480 aa17.01■□□□□ 0.31
PTPRN-203ENST00000412847 DDX46Q7L014 1031 aaKnown RBP17.01■□□□□ 0.31
PTPRN-203ENST00000412847 PNNQ9H307 717 aaKnown RBP17.01■□□□□ 0.31
PTPRN-203ENST00000412847 COL4A1P02462 1669 aa17.01■□□□□ 0.31
PTPRN-203ENST00000412847 HCLS1P14317 486 aaPredicted RBP17■□□□□ 0.31
PTPRN-203ENST00000412847 GRAPQ13588 217 aa17■□□□□ 0.31
PTPRN-203ENST00000412847 NLRP10Q86W26 655 aa17■□□□□ 0.31
PTPRN-203ENST00000412847 GRAPLQ8TC17 118 aaPredicted RBP17■□□□□ 0.31
PTPRN-203ENST00000412847 CNOT7Q9UIV1 285 aaKnown RBP17■□□□□ 0.31
PTPRN-203ENST00000412847 SPEF2Q9C093 1822 aa17■□□□□ 0.31
PTPRN-203ENST00000412847 SH3TC1Q8TE82 1336 aa16.99■□□□□ 0.31
PTPRN-203ENST00000412847 SHTN1A0MZ66 631 aa16.99■□□□□ 0.31
PTPRN-203ENST00000412847 YDJCA8MPS7 323 aa16.99■□□□□ 0.31
PTPRN-203ENST00000412847 H7C1D1 291 aa16.99■□□□□ 0.31
PTPRN-203ENST00000412847 NOGQ13253 232 aa16.99■□□□□ 0.31
PTPRN-203ENST00000412847 DGKZQ13574 1117 aa16.99■□□□□ 0.31
PTPRN-203ENST00000412847 TMC4Q7Z404 712 aa16.98■□□□□ 0.31
PTPRN-203ENST00000412847 MICALL2Q8IY33 904 aa16.98■□□□□ 0.31
PTPRN-203ENST00000412847 TRMT112Q9UI30 125 aaKnown RBP16.98■□□□□ 0.31
PTPRN-203ENST00000412847 MYH3P11055 1940 aa16.98■□□□□ 0.31
PTPRN-203ENST00000412847 HUNKP57058 714 aa16.97■□□□□ 0.31
PTPRN-203ENST00000412847 AIMP1Q12904 312 aaKnown RBP16.97■□□□□ 0.31
PTPRN-203ENST00000412847 COPS6Q7L5N1 327 aa16.97■□□□□ 0.31
PTPRN-203ENST00000412847 USP48Q86UV5 1035 aa16.97■□□□□ 0.31
PTPRN-203ENST00000412847 XAGE3Q8WTP9 111 aa16.97■□□□□ 0.31
PTPRN-203ENST00000412847 PDE4DIPQ5VU43 2346 aa16.97■□□□□ 0.31
PTPRN-203ENST00000412847 TCIRG1Q13488 830 aa16.96■□□□□ 0.31
PTPRN-203ENST00000412847 NECTIN2Q92692 538 aa16.96■□□□□ 0.31
PTPRN-203ENST00000412847 BABAM1Q9NWV8 329 aa16.96■□□□□ 0.31
PTPRN-203ENST00000412847 ZBTB12Q9Y330 459 aaPredicted RBP16.96■□□□□ 0.31
PTPRN-203ENST00000412847 DPF2Q92785 391 aa16.95■□□□□ 0.3
PTPRN-203ENST00000412847 ZIC5Q96T25 663 aa16.95■□□□□ 0.3
PTPRN-203ENST00000412847 ZNF646O15015 1829 aaPredicted RBP16.95■□□□□ 0.3
PTPRN-203ENST00000412847 RIPK4P57078 832 aa16.94■□□□□ 0.3
PTPRN-203ENST00000412847 WASHC4Q2M389 1173 aa16.94■□□□□ 0.3
PTPRN-203ENST00000412847 RGMBQ6NW40 437 aa16.94■□□□□ 0.3
PTPRN-203ENST00000412847 SAMD7Q7Z3H4 446 aa16.94■□□□□ 0.3
PTPRN-203ENST00000412847 DBNDD1Q9H9R9 158 aa16.94■□□□□ 0.3
PTPRN-203ENST00000412847 PAPPA2Q9BXP8 1791 aa16.94■□□□□ 0.3
PTPRN-203ENST00000412847 TNRC18O15417 2968 aaPredicted RBP16.93■□□□□ 0.3
PTPRN-203ENST00000412847 PSMD14O00487 310 aa16.93■□□□□ 0.3
PTPRN-203ENST00000412847 LMOD3Q0VAK6 560 aa16.93■□□□□ 0.3
PTPRN-203ENST00000412847 TBC1D10BQ4KMP7 808 aaPredicted RBP16.93■□□□□ 0.3
PTPRN-203ENST00000412847 DLK2Q6UY11 383 aa16.93■□□□□ 0.3
PTPRN-203ENST00000412847 KRT26Q7Z3Y9 468 aa16.93■□□□□ 0.3
PTPRN-203ENST00000412847 GBA2Q9HCG7 927 aaPredicted RBP16.93■□□□□ 0.3
PTPRN-203ENST00000412847 FAM155AB1AL88 458 aaPredicted RBP16.92■□□□□ 0.3
PTPRN-203ENST00000412847 EGFRP00533 1210 aa16.92■□□□□ 0.3
PTPRN-203ENST00000412847 RPS12P25398 132 aaKnown RBP16.92■□□□□ 0.3
PTPRN-203ENST00000412847 ZNF428Q96B54 188 aa16.92■□□□□ 0.3
PTPRN-203ENST00000412847 SAGE1Q9NXZ1 904 aa16.92■□□□□ 0.3
PTPRN-203ENST00000412847 NSFL1CQ9UNZ2 370 aaKnown RBP16.92■□□□□ 0.3
PTPRN-203ENST00000412847 ADM5C9JUS6 153 aa16.91■□□□□ 0.3
PTPRN-203ENST00000412847 C6orf229H3BNL8 230 aa16.91■□□□□ 0.3
PTPRN-203ENST00000412847 RIMBP2O15034 1052 aa16.91■□□□□ 0.3
PTPRN-203ENST00000412847 ECE2O60344 883 aa16.91■□□□□ 0.3
PTPRN-203ENST00000412847 C2orf69Q8N8R5 385 aa16.91■□□□□ 0.3
PTPRN-203ENST00000412847 CELF1Q92879 486 aaKnown RBP16.91■□□□□ 0.3
PTPRN-203ENST00000412847 CCDC102AQ96A19 550 aa16.91■□□□□ 0.3
PTPRN-203ENST00000412847 DCPSQ96C86 337 aaKnown RBP16.91■□□□□ 0.3
PTPRN-203ENST00000412847 EYA3Q99504 573 aa16.91■□□□□ 0.3
PTPRN-203ENST00000412847 RTL9Q8NET4 1388 aa16.9■□□□□ 0.3
PTPRN-203ENST00000412847 TMPOP42166 694 aaKnown RBP16.9■□□□□ 0.3
PTPRN-203ENST00000412847 GPSM2P81274 684 aa16.9■□□□□ 0.3
PTPRN-203ENST00000412847 CHPF2Q9P2E5 772 aa16.9■□□□□ 0.3
PTPRN-203ENST00000412847 ZNF157P51786 506 aaPredicted RBP16.89■□□□□ 0.29
PTPRN-203ENST00000412847 KIF23Q02241 960 aaPredicted RBP16.89■□□□□ 0.29
PTPRN-203ENST00000412847 SF3B3Q15393 1217 aaKnown RBP16.89■□□□□ 0.29
PTPRN-203ENST00000412847 KRT24Q2M2I5 525 aa16.89■□□□□ 0.29
PTPRN-203ENST00000412847 KIF4BQ2VIQ3 1234 aa16.89■□□□□ 0.29
PTPRN-203ENST00000412847 RBM26Q5T8P6 1007 aaKnown RBP16.89■□□□□ 0.29
PTPRN-203ENST00000412847 PLBD2Q8NHP8 589 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms