RNA–Protein interactions for RNA: ENST00000400186.7

CSMD1-202, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 10,938 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-202ENST00000400186 TTC22Q5TAA0 569 aa10.96□□□□□ -0.66
CSMD1-202ENST00000400186 NAP1L3Q99457 506 aaPredicted RBP10.96□□□□□ -0.66
CSMD1-202ENST00000400186 CAMSAP2Q08AD1 1489 aa10.96□□□□□ -0.66
CSMD1-202ENST00000400186 IARSP41252 1262 aaKnown RBP10.96□□□□□ -0.66
CSMD1-202ENST00000400186 FAM200AQ8TCP9 573 aa10.96□□□□□ -0.66
CSMD1-202ENST00000400186 LRRC27Q9C0I9 530 aa10.96□□□□□ -0.66
CSMD1-202ENST00000400186 STAT6P42226 847 aa10.96□□□□□ -0.66
CSMD1-202ENST00000400186 KCNG4Q8TDN1 519 aa10.96□□□□□ -0.66
CSMD1-202ENST00000400186 SLC26A6Q9BXS9 759 aa10.96□□□□□ -0.66
CSMD1-202ENST00000400186 ECHDC1Q9NTX5 307 aa10.96□□□□□ -0.66
CSMD1-202ENST00000400186 ZSCAN22P10073 491 aaPredicted RBP10.95□□□□□ -0.66
CSMD1-202ENST00000400186 CCDC8Q9H0W5 538 aaPredicted RBP10.95□□□□□ -0.66
CSMD1-202ENST00000400186 RPGRIP1LQ68CZ1 1315 aa10.95□□□□□ -0.66
CSMD1-202ENST00000400186 PRPHP41219 470 aa10.95□□□□□ -0.66
CSMD1-202ENST00000400186 APBB1IPQ7Z5R6 666 aaPredicted RBP10.95□□□□□ -0.66
CSMD1-202ENST00000400186 CCDC94Q9BW85 323 aaPredicted RBP10.95□□□□□ -0.66
CSMD1-202ENST00000400186 SMC6Q96SB8 1091 aa10.95□□□□□ -0.66
CSMD1-202ENST00000400186 EBAG9O00559 213 aa10.95□□□□□ -0.66
CSMD1-202ENST00000400186 CCDC129Q6ZRS4 1044 aa10.95□□□□□ -0.66
CSMD1-202ENST00000400186 SEPT6Q14141 434 aa10.95□□□□□ -0.66
CSMD1-202ENST00000400186 CCDC174Q6PII3 467 aa10.94□□□□□ -0.66
CSMD1-202ENST00000400186 BICD1Q96G01 975 aa10.94□□□□□ -0.66
CSMD1-202ENST00000400186 CCDC77Q9BR77 488 aa10.94□□□□□ -0.66
CSMD1-202ENST00000400186 SSX2IPQ9Y2D8 614 aa10.94□□□□□ -0.66
CSMD1-202ENST00000400186 TSHZ3Q63HK5 1081 aa10.94□□□□□ -0.66
CSMD1-202ENST00000400186 MYO10Q9HD67 2058 aa10.94□□□□□ -0.66
CSMD1-202ENST00000400186 PDE4BQ07343 736 aa10.94□□□□□ -0.66
CSMD1-202ENST00000400186 F6X3S4 739 aa10.94□□□□□ -0.66
CSMD1-202ENST00000400186 TUBB4BP68371 445 aa10.94□□□□□ -0.66
CSMD1-202ENST00000400186 GTPBP4Q9BZE4 634 aaKnown RBP10.94□□□□□ -0.66
CSMD1-202ENST00000400186 SAMM50Q9Y512 469 aa10.94□□□□□ -0.66
CSMD1-202ENST00000400186 KRT13P13646 458 aa10.94□□□□□ -0.66
CSMD1-202ENST00000400186 HAND2P61296 217 aa10.94□□□□□ -0.66
CSMD1-202ENST00000400186 TMOD3Q9NYL9 352 aa10.94□□□□□ -0.66
CSMD1-202ENST00000400186 RAB3IL1Q8TBN0 382 aa10.94□□□□□ -0.66
CSMD1-202ENST00000400186 TACC1O75410 805 aa10.94□□□□□ -0.66
CSMD1-202ENST00000400186 RRAGBQ5VZM2 374 aa10.94□□□□□ -0.66
CSMD1-202ENST00000400186 THEMISQ8N1K5 641 aaPredicted RBP10.94□□□□□ -0.66
CSMD1-202ENST00000400186 SPAG5Q96R06 1193 aa10.94□□□□□ -0.66
CSMD1-202ENST00000400186 ANAPC4Q9UJX5 808 aa10.94□□□□□ -0.66
CSMD1-202ENST00000400186 PTCD1O75127 700 aaKnown RBP10.94□□□□□ -0.66
CSMD1-202ENST00000400186 PTGS1P23219 599 aa10.94□□□□□ -0.66
CSMD1-202ENST00000400186 CLCN1P35523 988 aa10.94□□□□□ -0.66
CSMD1-202ENST00000400186 NCOA7Q8NI08 942 aa10.93□□□□□ -0.66
CSMD1-202ENST00000400186 TROQ12816 1431 aaPredicted RBP10.93□□□□□ -0.66
CSMD1-202ENST00000400186 IRX3P78415 501 aaPredicted RBP10.93□□□□□ -0.66
CSMD1-202ENST00000400186 CAPZA3Q96KX2 299 aa10.93□□□□□ -0.66
CSMD1-202ENST00000400186 SF3B2Q13435 895 aaKnown RBP10.93□□□□□ -0.66
CSMD1-202ENST00000400186 OTUD6BQ8N6M0 293 aa10.93□□□□□ -0.66
CSMD1-202ENST00000400186 CEP83Q9Y592 693 aa10.93□□□□□ -0.66
CSMD1-202ENST00000400186 HSP90AA4PQ58FG1 418 aa10.93□□□□□ -0.66
CSMD1-202ENST00000400186 TUBB4AP04350 444 aa10.93□□□□□ -0.66
CSMD1-202ENST00000400186 MICALL1Q8N3F8 863 aa10.93□□□□□ -0.66
CSMD1-202ENST00000400186 CDK13Q14004 1512 aaKnown RBP10.93□□□□□ -0.66
CSMD1-202ENST00000400186 IQGAP2Q13576 1575 aa10.93□□□□□ -0.66
CSMD1-202ENST00000400186 BMP15O95972 392 aa10.93□□□□□ -0.66
CSMD1-202ENST00000400186 AFMP43652 599 aa10.93□□□□□ -0.66
CSMD1-202ENST00000400186 RAB11FIP4Q86YS3 637 aa10.93□□□□□ -0.66
CSMD1-202ENST00000400186 PPFIA3O75145 1194 aa10.93□□□□□ -0.66
CSMD1-202ENST00000400186 KAT14Q9H8E8 782 aa10.93□□□□□ -0.66
CSMD1-202ENST00000400186 VPS18Q9P253 973 aa10.93□□□□□ -0.66
CSMD1-202ENST00000400186 ARL1P40616 181 aaPredicted RBP10.93□□□□□ -0.66
CSMD1-202ENST00000400186 AMOTQ4VCS5 1084 aa10.93□□□□□ -0.66
CSMD1-202ENST00000400186 SLU7O95391 586 aaKnown RBP10.92□□□□□ -0.66
CSMD1-202ENST00000400186 SPAG1Q07617 926 aa10.92□□□□□ -0.66
CSMD1-202ENST00000400186 USP48Q86UV5 1035 aa10.92□□□□□ -0.66
CSMD1-202ENST00000400186 AOPEPQ8N6M6 819 aa10.92□□□□□ -0.66
CSMD1-202ENST00000400186 MMRN2Q9H8L6 949 aa10.92□□□□□ -0.66
CSMD1-202ENST00000400186 ATP2A1O14983 1001 aa10.92□□□□□ -0.66
CSMD1-202ENST00000400186 MRPS27Q92552 414 aaKnown RBP10.92□□□□□ -0.66
CSMD1-202ENST00000400186 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.92□□□□□ -0.66
CSMD1-202ENST00000400186 V9GYY5 206 aaPredicted RBP10.92□□□□□ -0.66
CSMD1-202ENST00000400186 PRG4Q92954 1404 aaPredicted RBP10.92□□□□□ -0.66
CSMD1-202ENST00000400186 NOL3O60936 208 aaKnown RBP10.92□□□□□ -0.66
CSMD1-202ENST00000400186 DDX46Q7L014 1031 aaKnown RBP10.92□□□□□ -0.66
CSMD1-202ENST00000400186 RPGRQ92834 1020 aaKnown RBP10.92□□□□□ -0.66
CSMD1-202ENST00000400186 RTL1A6NKG5 1358 aa10.92□□□□□ -0.66
CSMD1-202ENST00000400186 ZEB2O60315 1214 aa10.92□□□□□ -0.66
CSMD1-202ENST00000400186 GSTA5Q7RTV2 222 aa10.92□□□□□ -0.66
CSMD1-202ENST00000400186 SELENOSQ9BQE4 189 aa10.92□□□□□ -0.66
CSMD1-202ENST00000400186 ZWINTO95229 277 aa10.92□□□□□ -0.66
CSMD1-202ENST00000400186 MRPS9P82933 396 aaKnown RBP10.92□□□□□ -0.66
CSMD1-202ENST00000400186 NUTM2BA6NNL0 878 aaPredicted RBP10.92□□□□□ -0.66
CSMD1-202ENST00000400186 NUTM2EB1AL46 878 aaPredicted RBP10.92□□□□□ -0.66
CSMD1-202ENST00000400186 NUTM2AQ8IVF1 878 aaPredicted RBP10.92□□□□□ -0.66
CSMD1-202ENST00000400186 PIK3R4Q99570 1358 aa10.92□□□□□ -0.66
CSMD1-202ENST00000400186 TYRO3Q06418 890 aa10.92□□□□□ -0.66
CSMD1-202ENST00000400186 KCNH5Q8NCM2 988 aa10.92□□□□□ -0.66
CSMD1-202ENST00000400186 NEK1Q96PY6 1258 aa10.92□□□□□ -0.66
CSMD1-202ENST00000400186 FLIIQ13045 1269 aa10.91□□□□□ -0.66
CSMD1-202ENST00000400186 DBF4Q9UBU7 674 aaPredicted RBP10.91□□□□□ -0.66
CSMD1-202ENST00000400186 RSRC1Q96IZ7 334 aaKnown RBP10.91□□□□□ -0.66
CSMD1-202ENST00000400186 CCDC114Q96M63 670 aa10.91□□□□□ -0.66
CSMD1-202ENST00000400186 PSMC4P43686 418 aa10.91□□□□□ -0.66
CSMD1-202ENST00000400186 NUCB1Q02818 461 aa10.91□□□□□ -0.66
CSMD1-202ENST00000400186 CPLX4Q7Z7G2 160 aa10.91□□□□□ -0.66
CSMD1-202ENST00000400186 WDR66Q8TBY9 1149 aa10.91□□□□□ -0.66
CSMD1-202ENST00000400186 LRRC45Q96CN5 670 aa10.91□□□□□ -0.66
CSMD1-202ENST00000400186 RALGAPBQ86X10 1494 aa10.91□□□□□ -0.66
CSMD1-202ENST00000400186 XRCC6P12956 609 aaKnown RBP eCLIP10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms