RNA–Protein interactions for RNA: ENST00000399523.5

UFD1-202, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 1 (best) BASIC

Gene UFD1, Length 1,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-202ENST00000399523 ABCC4O15439 1325 aa24■■□□□ 1.43
UFD1-202ENST00000399523 BBOX1O75936 387 aa23.99■■□□□ 1.43
UFD1-202ENST00000399523 RAD17O75943 681 aa23.99■■□□□ 1.43
UFD1-202ENST00000399523 PARP10Q53GL7 1025 aa23.99■■□□□ 1.43
UFD1-202ENST00000399523 DPP8Q6V1X1 898 aaPredicted RBP23.99■■□□□ 1.43
UFD1-202ENST00000399523 SP8Q8IXZ3 490 aa23.99■■□□□ 1.43
UFD1-202ENST00000399523 PNISRQ8TF01 805 aaKnown RBP23.99■■□□□ 1.43
UFD1-202ENST00000399523 FAM155AB1AL88 458 aaPredicted RBP23.98■■□□□ 1.43
UFD1-202ENST00000399523 MYL6BP14649 208 aa23.98■■□□□ 1.43
UFD1-202ENST00000399523 EIF4A1P60842 406 aaKnown RBP23.98■■□□□ 1.43
UFD1-202ENST00000399523 USP48Q86UV5 1035 aa23.98■■□□□ 1.43
UFD1-202ENST00000399523 KDM3BQ7LBC6 1761 aa23.98■■□□□ 1.43
UFD1-202ENST00000399523 MPNDQ8N594 471 aa23.97■■□□□ 1.43
UFD1-202ENST00000399523 POLR2AP24928 1970 aaKnown RBP23.96■■□□□ 1.43
UFD1-202ENST00000399523 SHTN1A0MZ66 631 aa23.96■■□□□ 1.43
UFD1-202ENST00000399523 H7C1D1 291 aa23.96■■□□□ 1.43
UFD1-202ENST00000399523 SOX10P56693 466 aa23.96■■□□□ 1.43
UFD1-202ENST00000399523 RGMBQ6NW40 437 aa23.96■■□□□ 1.43
UFD1-202ENST00000399523 YDJCA8MPS7 323 aa23.95■■□□□ 1.42
UFD1-202ENST00000399523 DLK2Q6UY11 383 aa23.95■■□□□ 1.42
UFD1-202ENST00000399523 CCDC102AQ96A19 550 aa23.95■■□□□ 1.42
UFD1-202ENST00000399523 UTP14AQ9BVJ6 771 aaKnown RBP23.95■■□□□ 1.42
UFD1-202ENST00000399523 ERBB4Q15303 1308 aa23.94■■□□□ 1.42
UFD1-202ENST00000399523 MICALL2Q8IY33 904 aa23.94■■□□□ 1.42
UFD1-202ENST00000399523 DPF2Q92785 391 aa23.94■■□□□ 1.42
UFD1-202ENST00000399523 AKAP11Q9UKA4 1901 aa23.93■■□□□ 1.42
UFD1-202ENST00000399523 KIF23Q02241 960 aaPredicted RBP23.93■■□□□ 1.42
UFD1-202ENST00000399523 PRPF38BQ5VTL8 546 aaKnown RBP23.93■■□□□ 1.42
UFD1-202ENST00000399523 GBA2Q9HCG7 927 aaPredicted RBP23.93■■□□□ 1.42
UFD1-202ENST00000399523 RNF186Q9NXI6 227 aa23.93■■□□□ 1.42
UFD1-202ENST00000399523 ANKRD36CQ5JPF3 1778 aa23.93■■□□□ 1.42
UFD1-202ENST00000399523 KRT26Q7Z3Y9 468 aa23.92■■□□□ 1.42
UFD1-202ENST00000399523 LAMB2P55268 1798 aa23.91■■□□□ 1.42
UFD1-202ENST00000399523 SAMD7Q7Z3H4 446 aa23.91■■□□□ 1.42
UFD1-202ENST00000399523 LRP10Q7Z4F1 713 aa23.91■■□□□ 1.42
UFD1-202ENST00000399523 C2orf69Q8N8R5 385 aa23.91■■□□□ 1.42
UFD1-202ENST00000399523 DLG5Q8TDM6 1919 aa23.9■■□□□ 1.42
UFD1-202ENST00000399523 TRPA1O75762 1119 aa23.9■■□□□ 1.42
UFD1-202ENST00000399523 ZBTB12Q9Y330 459 aaPredicted RBP23.9■■□□□ 1.42
UFD1-202ENST00000399523 PPP2R1AP30153 589 aa23.89■■□□□ 1.41
UFD1-202ENST00000399523 ZNF157P51786 506 aaPredicted RBP23.89■■□□□ 1.41
UFD1-202ENST00000399523 DUOX1Q9NRD9 1551 aa23.89■■□□□ 1.41
UFD1-202ENST00000399523 GRAPQ13588 217 aa23.88■■□□□ 1.41
UFD1-202ENST00000399523 DDX46Q7L014 1031 aaKnown RBP23.88■■□□□ 1.41
UFD1-202ENST00000399523 CTU1Q7Z7A3 348 aaKnown RBP23.88■■□□□ 1.41
UFD1-202ENST00000399523 GRAPLQ8TC17 118 aaPredicted RBP23.88■■□□□ 1.41
UFD1-202ENST00000399523 PSMD14O00487 310 aa23.87■■□□□ 1.41
UFD1-202ENST00000399523 EGFRP00533 1210 aa23.87■■□□□ 1.41
UFD1-202ENST00000399523 HCLS1P14317 486 aaPredicted RBP23.87■■□□□ 1.41
UFD1-202ENST00000399523 PDIA6Q15084 440 aa23.87■■□□□ 1.41
UFD1-202ENST00000399523 TBC1D10BQ4KMP7 808 aaPredicted RBP23.87■■□□□ 1.41
UFD1-202ENST00000399523 TMC4Q7Z404 712 aa23.87■■□□□ 1.41
UFD1-202ENST00000399523 CSRNP1Q96S65 589 aa23.87■■□□□ 1.41
UFD1-202ENST00000399523 TAF1P21675 1872 aa23.86■■□□□ 1.41
UFD1-202ENST00000399523 SLC10A3P09131 477 aa23.86■■□□□ 1.41
UFD1-202ENST00000399523 DCPSQ96C86 337 aaKnown RBP23.86■■□□□ 1.41
UFD1-202ENST00000399523 THUMPD2Q9BTF0 503 aaKnown RBP23.86■■□□□ 1.41
UFD1-202ENST00000399523 ADM5C9JUS6 153 aa23.85■■□□□ 1.41
UFD1-202ENST00000399523 RPS12P25398 132 aaKnown RBP23.85■■□□□ 1.41
UFD1-202ENST00000399523 LRRC37AA6NMS7 1700 aa23.84■■□□□ 1.41
UFD1-202ENST00000399523 NLRP10Q86W26 655 aa23.84■■□□□ 1.41
UFD1-202ENST00000399523 REM2Q8IYK8 340 aaPredicted RBP23.84■■□□□ 1.41
UFD1-202ENST00000399523 WASHC4Q2M389 1173 aa23.83■■□□□ 1.41
UFD1-202ENST00000399523 HSP90AB3PQ58FF7 597 aa23.83■■□□□ 1.41
UFD1-202ENST00000399523 PROSER3Q2NL68 480 aa23.82■■□□□ 1.4
UFD1-202ENST00000399523 DBNDD1Q9H9R9 158 aa23.82■■□□□ 1.4
UFD1-202ENST00000399523 NEFMP07197 916 aa23.81■■□□□ 1.4
UFD1-202ENST00000399523 RBM26Q5T8P6 1007 aaKnown RBP23.81■■□□□ 1.4
UFD1-202ENST00000399523 TRMT112Q9UI30 125 aaKnown RBP23.81■■□□□ 1.4
UFD1-202ENST00000399523 HPS5Q9UPZ3 1129 aa23.81■■□□□ 1.4
UFD1-202ENST00000399523 SH3TC1Q8TE82 1336 aa23.81■■□□□ 1.4
UFD1-202ENST00000399523 PLEKHF1Q96S99 279 aa23.8■■□□□ 1.4
UFD1-202ENST00000399523 RTL9Q8NET4 1388 aa23.79■■□□□ 1.4
UFD1-202ENST00000399523 EIF2S2P20042 333 aaKnown RBP23.79■■□□□ 1.4
UFD1-202ENST00000399523 TCIRG1Q13488 830 aa23.79■■□□□ 1.4
UFD1-202ENST00000399523 NFE2L2Q16236 605 aa23.79■■□□□ 1.4
UFD1-202ENST00000399523 PKN2Q16513 984 aaKnown RBP23.79■■□□□ 1.4
UFD1-202ENST00000399523 SULF1Q8IWU6 871 aa23.79■■□□□ 1.4
UFD1-202ENST00000399523 CCER1Q8TC90 406 aaPredicted RBP23.79■■□□□ 1.4
UFD1-202ENST00000399523 KCNQ5Q9NR82 932 aa23.79■■□□□ 1.4
UFD1-202ENST00000399523 NSFL1CQ9UNZ2 370 aaKnown RBP23.79■■□□□ 1.4
UFD1-202ENST00000399523 ANXA1P04083 346 aa23.78■■□□□ 1.4
UFD1-202ENST00000399523 KIF4BQ2VIQ3 1234 aa23.78■■□□□ 1.4
UFD1-202ENST00000399523 COPS6Q7L5N1 327 aa23.78■■□□□ 1.4
UFD1-202ENST00000399523 POLLQ9UGP5 575 aa23.78■■□□□ 1.4
UFD1-202ENST00000399523 RIMBP2O15034 1052 aa23.77■■□□□ 1.4
UFD1-202ENST00000399523 ECE2O60344 883 aa23.77■■□□□ 1.4
UFD1-202ENST00000399523 RASAL3Q86YV0 1011 aa23.77■■□□□ 1.4
UFD1-202ENST00000399523 GGA3Q9NZ52 723 aa23.77■■□□□ 1.4
UFD1-202ENST00000399523 CDCA5Q96FF9 252 aa23.76■■□□□ 1.39
UFD1-202ENST00000399523 TSPYL4Q9UJ04 414 aa23.76■■□□□ 1.39
UFD1-202ENST00000399523 SCN9AQ15858 1988 aa23.75■■□□□ 1.39
UFD1-202ENST00000399523 C6orf229H3BNL8 230 aa23.75■■□□□ 1.39
UFD1-202ENST00000399523 VIL1P09327 827 aaKnown RBP23.75■■□□□ 1.39
UFD1-202ENST00000399523 XAGE3Q8WTP9 111 aa23.75■■□□□ 1.39
UFD1-202ENST00000399523 CELF1Q92879 486 aaKnown RBP23.75■■□□□ 1.39
UFD1-202ENST00000399523 ASTN2O75129 1339 aaPredicted RBP23.75■■□□□ 1.39
UFD1-202ENST00000399523 DDX60Q8IY21 1712 aaKnown RBP23.75■■□□□ 1.39
UFD1-202ENST00000399523 FKBP1BP68106 108 aa23.74■■□□□ 1.39
UFD1-202ENST00000399523 GPSM2P81274 684 aa23.74■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms