RNA–Protein interactions for RNA: ENST00000399349.5

ITSN1-208, Transcript of intersectin 1, humanhuman

TSL 1 (best) BASIC

Gene ITSN1, Length 5,191 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-208ENST00000399349 PDE4BQ07343 736 aa15.13■□□□□ 0.01
ITSN1-208ENST00000399349 ALG1Q9BT22 464 aa15.13■□□□□ 0.01
ITSN1-208ENST00000399349 KAT6BQ8WYB5 2073 aa15.13■□□□□ 0.01
ITSN1-208ENST00000399349 IL16Q14005 1332 aa15.13■□□□□ 0.01
ITSN1-208ENST00000399349 NEMFO60524 1076 aa15.13■□□□□ 0.01
ITSN1-208ENST00000399349 KIF5BP33176 963 aa15.13■□□□□ 0.01
ITSN1-208ENST00000399349 WTAPQ15007 396 aa15.13■□□□□ 0.01
ITSN1-208ENST00000399349 TRIM47Q96LD4 638 aa15.13■□□□□ 0.01
ITSN1-208ENST00000399349 DNAJC25Q9H1X3 360 aa15.13■□□□□ 0.01
ITSN1-208ENST00000399349 CEP135Q66GS9 1140 aa15.13■□□□□ 0.01
ITSN1-208ENST00000399349 Q6ZUG5 572 aa15.13■□□□□ 0.01
ITSN1-208ENST00000399349 ZBTB43O43298 467 aa15.13■□□□□ 0.01
ITSN1-208ENST00000399349 UBASH3AP57075 661 aa15.13■□□□□ 0.01
ITSN1-208ENST00000399349 SAMM50Q9Y512 469 aa15.13■□□□□ 0.01
ITSN1-208ENST00000399349 FAM135AQ9P2D6 1515 aa15.13■□□□□ 0.01
ITSN1-208ENST00000399349 DCAF8L1A6NGE4 600 aa15.13■□□□□ 0.01
ITSN1-208ENST00000399349 ARHGAP45Q92619 1136 aa15.13■□□□□ 0.01
ITSN1-208ENST00000399349 SMARCC1Q92922 1105 aaPredicted RBP15.13■□□□□ 0.01
ITSN1-208ENST00000399349 ANAPC15P60006 121 aa15.12■□□□□ 0.01
ITSN1-208ENST00000399349 RNF187Q5TA31 235 aaPredicted RBP15.12■□□□□ 0.01
ITSN1-208ENST00000399349 MRPL50Q8N5N7 158 aaKnown RBP15.12■□□□□ 0.01
ITSN1-208ENST00000399349 FAM107BQ9H098 131 aa15.12■□□□□ 0.01
ITSN1-208ENST00000399349 AKR1B10O60218 316 aa15.12■□□□□ 0.01
ITSN1-208ENST00000399349 UBE4AQ14139 1066 aa15.12■□□□□ 0.01
ITSN1-208ENST00000399349 ZGPATQ8N5A5 531 aaKnown RBP15.12■□□□□ 0.01
ITSN1-208ENST00000399349 GRM8O00222 908 aa15.12■□□□□ 0.01
ITSN1-208ENST00000399349 ATP2B3Q16720 1220 aa15.12■□□□□ 0.01
ITSN1-208ENST00000399349 ZSCAN16Q9H4T2 348 aaPredicted RBP15.12■□□□□ 0.01
ITSN1-208ENST00000399349 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.12■□□□□ 0.01
ITSN1-208ENST00000399349 V9GYY5 206 aaPredicted RBP15.12■□□□□ 0.01
ITSN1-208ENST00000399349 SKILP12757 684 aa15.12■□□□□ 0.01
ITSN1-208ENST00000399349 CWF19L2Q2TBE0 894 aaKnown RBP15.12■□□□□ 0.01
ITSN1-208ENST00000399349 DRC1Q96MC2 740 aa15.12■□□□□ 0.01
ITSN1-208ENST00000399349 NSD2O96028 1365 aa15.11■□□□□ 0.01
ITSN1-208ENST00000399349 TRIM21P19474 475 aaKnown RBP15.11■□□□□ 0.01
ITSN1-208ENST00000399349 SLC9C2Q5TAH2 1124 aa15.11■□□□□ 0.01
ITSN1-208ENST00000399349 LRRC59Q96AG4 307 aaKnown RBP15.11■□□□□ 0.01
ITSN1-208ENST00000399349 CC2D2AQ9P2K1 1620 aa15.11■□□□□ 0.01
ITSN1-208ENST00000399349 F8W031 263 aaPredicted RBP15.11■□□□□ 0.01
ITSN1-208ENST00000399349 KIF20AO95235 890 aa15.11■□□□□ 0.01
ITSN1-208ENST00000399349 CYP7A1P22680 504 aa15.11■□□□□ 0.01
ITSN1-208ENST00000399349 RBM25P49756 843 aaKnown RBP15.11■□□□□ 0.01
ITSN1-208ENST00000399349 DNMBPQ6XZF7 1577 aa15.11■□□□□ 0.01
ITSN1-208ENST00000399349 MAP3K1Q13233 1512 aa15.11■□□□□ 0.01
ITSN1-208ENST00000399349 BAG3O95817 575 aa15.11■□□□□ 0.01
ITSN1-208ENST00000399349 PRIM1P49642 420 aaKnown RBP15.11■□□□□ 0.01
ITSN1-208ENST00000399349 PRC1O43663 620 aa15.11■□□□□ 0.01
ITSN1-208ENST00000399349 RRAGBQ5VZM2 374 aa15.11■□□□□ 0.01
ITSN1-208ENST00000399349 PPP4R3AQ6IN85 833 aa15.11■□□□□ 0.01
ITSN1-208ENST00000399349 ACSBG1Q96GR2 724 aa15.11■□□□□ 0.01
ITSN1-208ENST00000399349 ANKRD36BQ8N2N9 1353 aa15.1■□□□□ 0.01
ITSN1-208ENST00000399349 PTGS1P23219 599 aa15.1■□□□□ 0.01
ITSN1-208ENST00000399349 LMOD1P29536 600 aaPredicted RBP15.1■□□□□ 0.01
ITSN1-208ENST00000399349 ATP8B2P98198 1209 aa15.1■□□□□ 0.01
ITSN1-208ENST00000399349 AMPD3Q01432 767 aa15.1■□□□□ 0.01
ITSN1-208ENST00000399349 AOPEPQ8N6M6 819 aa15.1■□□□□ 0.01
ITSN1-208ENST00000399349 DNAI1Q9UI46 699 aa15.1■□□□□ 0.01
ITSN1-208ENST00000399349 SLC4A4Q9Y6R1 1079 aa15.1■□□□□ 0.01
ITSN1-208ENST00000399349 IGSF3O75054 1194 aa15.1■□□□□ 0.01
ITSN1-208ENST00000399349 CTNNA2P26232 953 aa15.1■□□□□ 0.01
ITSN1-208ENST00000399349 NMIQ13287 307 aaPredicted RBP15.1■□□□□ 0.01
ITSN1-208ENST00000399349 EIF4A2Q14240 407 aaKnown RBP15.1■□□□□ 0.01
ITSN1-208ENST00000399349 HELBQ8NG08 1087 aaPredicted RBP15.1■□□□□ 0.01
ITSN1-208ENST00000399349 SYCP3Q8IZU3 236 aa15.1■□□□□ 0.01
ITSN1-208ENST00000399349 ALS2CR12Q96Q35 445 aa15.1■□□□□ 0.01
ITSN1-208ENST00000399349 LDHCP07864 332 aa15.1■□□□□ 0.01
ITSN1-208ENST00000399349 TTLL12Q14166 644 aaPredicted RBP15.1■□□□□ 0.01
ITSN1-208ENST00000399349 LMAN1P49257 510 aa15.09■□□□□ 0.01
ITSN1-208ENST00000399349 MTHFSDQ2M296 383 aaKnown RBP15.09■□□□□ 0.01
ITSN1-208ENST00000399349 MCMDC2Q4G0Z9 681 aa15.09■□□□□ 0.01
ITSN1-208ENST00000399349 POLKQ9UBT6 870 aa15.09■□□□□ 0.01
ITSN1-208ENST00000399349 SLF2Q8IX21 1173 aa15.09■□□□□ 0.01
ITSN1-208ENST00000399349 PHACTR3Q96KR7 559 aa15.09■□□□□ 0.01
ITSN1-208ENST00000399349 DHX29Q7Z478 1369 aaKnown RBP15.09■□□□□ 0.01
ITSN1-208ENST00000399349 NBPF6Q5VWK0 638 aa15.09■□□□□ 0.01
ITSN1-208ENST00000399349 CTR9Q6PD62 1173 aa15.09■□□□□ 0.01
ITSN1-208ENST00000399349 MAATS1Q7Z4T9 603 aa15.09■□□□□ 0.01
ITSN1-208ENST00000399349 NBPF5PQ86XG9 351 aaPredicted RBP15.09■□□□□ 0.01
ITSN1-208ENST00000399349 MRPS27Q92552 414 aaKnown RBP15.09■□□□□ 0.01
ITSN1-208ENST00000399349 NBPF4Q96M43 638 aa15.09■□□□□ 0.01
ITSN1-208ENST00000399349 TEX13AQ9BXU3 409 aaPredicted RBP15.09■□□□□ 0.01
ITSN1-208ENST00000399349 PUF60Q9UHX1 559 aaKnown RBP15.09■□□□□ 0.01
ITSN1-208ENST00000399349 F13A1P00488 732 aa15.09■□□□□ 0.01
ITSN1-208ENST00000399349 CPA1P15085 419 aa15.09■□□□□ 0.01
ITSN1-208ENST00000399349 NOLC1Q14978 699 aaKnown RBP eCLIP15.09■□□□□ 0.01
ITSN1-208ENST00000399349 FAM200AQ8TCP9 573 aa15.09■□□□□ 0.01
ITSN1-208ENST00000399349 CABLES1Q8TDN4 633 aa15.09■□□□□ 0.01
ITSN1-208ENST00000399349 ZNF622Q969S3 477 aaKnown RBP eCLIP15.09■□□□□ 0.01
ITSN1-208ENST00000399349 NBPF7P0C2Y1 421 aaPredicted RBP15.08■□□□□ 0.01
ITSN1-208ENST00000399349 CETN1Q12798 172 aa15.08■□□□□ 0.01
ITSN1-208ENST00000399349 UVSSAQ2YD98 709 aa15.08■□□□□ 0.01
ITSN1-208ENST00000399349 ABCA10Q8WWZ4 1543 aa15.08■□□□□ 0.01
ITSN1-208ENST00000399349 RXRAP19793 462 aa15.08■□□□□ 0
ITSN1-208ENST00000399349 IFIT1BQ5T764 474 aaKnown RBP15.08■□□□□ 0
ITSN1-208ENST00000399349 RTN1Q16799 776 aa15.08■□□□□ 0
ITSN1-208ENST00000399349 KSR2Q6VAB6 950 aa15.08■□□□□ 0
ITSN1-208ENST00000399349 HOOK3Q86VS8 718 aa15.08■□□□□ 0
ITSN1-208ENST00000399349 DTNBO60941 627 aa15.08■□□□□ 0
ITSN1-208ENST00000399349 AK2P54819 239 aa15.08■□□□□ 0
ITSN1-208ENST00000399349 KANK3Q6NY19 840 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms