RNA–Protein interactions for RNA: ENST00000395840.6

RAE1-202, Transcript of ribonucleic acid export 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAE1, Length 2,602 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1-202ENST00000395840 CT47B1P0C2W7 299 aaPredicted RBP10.87□□□□□ -0.67
RAE1-202ENST00000395840 NUCB2P80303 420 aa10.87□□□□□ -0.67
RAE1-202ENST00000395840 PKP1Q13835 747 aa10.87□□□□□ -0.67
RAE1-202ENST00000395840 TSPYL1Q9H0U9 437 aa10.87□□□□□ -0.67
RAE1-202ENST00000395840 DDX41Q9UJV9 622 aaKnown RBP10.87□□□□□ -0.67
RAE1-202ENST00000395840 NSFL1CQ9UNZ2 370 aaKnown RBP10.87□□□□□ -0.67
RAE1-202ENST00000395840 RFC4P35249 363 aa10.86□□□□□ -0.67
RAE1-202ENST00000395840 NCBP1Q09161 790 aaKnown RBP10.86□□□□□ -0.67
RAE1-202ENST00000395840 ZNF428Q96B54 188 aa10.86□□□□□ -0.67
RAE1-202ENST00000395840 HDAC5Q9UQL6 1122 aa10.86□□□□□ -0.67
RAE1-202ENST00000395840 UBR3Q6ZT12 1888 aa10.86□□□□□ -0.67
RAE1-202ENST00000395840 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.86□□□□□ -0.67
RAE1-202ENST00000395840 MMP14P50281 582 aa10.86□□□□□ -0.67
RAE1-202ENST00000395840 CCDC30Q5VVM6 783 aa10.86□□□□□ -0.67
RAE1-202ENST00000395840 PNPLA7Q6ZV29 1317 aa10.85□□□□□ -0.67
RAE1-202ENST00000395840 BCL2L13Q9BXK5 485 aa10.85□□□□□ -0.67
RAE1-202ENST00000395840 MTFR1LQ9H019 292 aa10.85□□□□□ -0.67
RAE1-202ENST00000395840 DBF4Q9UBU7 674 aaPredicted RBP10.85□□□□□ -0.67
RAE1-202ENST00000395840 USP16Q9Y5T5 823 aa10.85□□□□□ -0.67
RAE1-202ENST00000395840 ZPR1O75312 459 aa10.85□□□□□ -0.67
RAE1-202ENST00000395840 CYP2E1P05181 493 aaPredicted RBP10.85□□□□□ -0.67
RAE1-202ENST00000395840 RARSP54136 660 aaKnown RBP10.85□□□□□ -0.67
RAE1-202ENST00000395840 EIF5P55010 431 aaKnown RBP10.85□□□□□ -0.67
RAE1-202ENST00000395840 HDGFL1Q5TGJ6 251 aa10.85□□□□□ -0.67
RAE1-202ENST00000395840 FEZ2Q9UHY8 353 aaPredicted RBP10.85□□□□□ -0.67
RAE1-202ENST00000395840 MORC2Q9Y6X9 1032 aaPredicted RBP10.85□□□□□ -0.67
RAE1-202ENST00000395840 NLGN1Q8N2Q7 840 aa10.84□□□□□ -0.67
RAE1-202ENST00000395840 TSPY26PQ9H489 355 aa10.84□□□□□ -0.67
RAE1-202ENST00000395840 HYPKQ9NX55 129 aa10.84□□□□□ -0.67
RAE1-202ENST00000395840 COL15A1P39059 1388 aa10.84□□□□□ -0.67
RAE1-202ENST00000395840 CASZ1Q86V15 1759 aa10.84□□□□□ -0.67
RAE1-202ENST00000395840 TWISTNBQ3B726 338 aaPredicted RBP10.84□□□□□ -0.67
RAE1-202ENST00000395840 COL23A1Q86Y22 540 aaPredicted RBP10.84□□□□□ -0.67
RAE1-202ENST00000395840 CHAMP1Q96JM3 812 aa10.84□□□□□ -0.67
RAE1-202ENST00000395840 STK31Q9BXU1 1019 aa10.84□□□□□ -0.67
RAE1-202ENST00000395840 YY1AP1Q9H869 796 aa10.84□□□□□ -0.67
RAE1-202ENST00000395840 DDX21Q9NR30 783 aaKnown RBP eCLIP10.84□□□□□ -0.67
RAE1-202ENST00000395840 ZNF652Q9Y2D9 606 aa10.84□□□□□ -0.67
RAE1-202ENST00000395840 ZBTB1Q9Y2K1 713 aa10.84□□□□□ -0.67
RAE1-202ENST00000395840 EIF2S2P20042 333 aaKnown RBP10.83□□□□□ -0.68
RAE1-202ENST00000395840 PSEN1P49768 467 aa10.83□□□□□ -0.68
RAE1-202ENST00000395840 ARHGEF1Q92888 912 aaKnown RBP10.83□□□□□ -0.68
RAE1-202ENST00000395840 TSR2Q969E8 191 aaKnown RBP10.83□□□□□ -0.68
RAE1-202ENST00000395840 GEMIN8Q9NWZ8 242 aaKnown RBP10.83□□□□□ -0.68
RAE1-202ENST00000395840 NARFQ9UHQ1 456 aa10.83□□□□□ -0.68
RAE1-202ENST00000395840 TUBGCP6Q96RT7 1819 aa10.83□□□□□ -0.68
RAE1-202ENST00000395840 PSDA5PKW4 1024 aaPredicted RBP10.83□□□□□ -0.68
RAE1-202ENST00000395840 PHF14O94880 888 aa10.83□□□□□ -0.68
RAE1-202ENST00000395840 A1BGP04217 495 aa10.83□□□□□ -0.68
RAE1-202ENST00000395840 POLD1P28340 1107 aa10.83□□□□□ -0.68
RAE1-202ENST00000395840 TNNT3P45378 269 aaPredicted RBP10.83□□□□□ -0.68
RAE1-202ENST00000395840 KIF6Q6ZMV9 814 aa10.83□□□□□ -0.68
RAE1-202ENST00000395840 SPON1Q9HCB6 807 aa10.83□□□□□ -0.68
RAE1-202ENST00000395840 USP25Q9UHP3 1055 aa10.83□□□□□ -0.68
RAE1-202ENST00000395840 MYH14Q7Z406 1995 aaKnown RBP10.82□□□□□ -0.68
RAE1-202ENST00000395840 APPP05067 770 aa10.82□□□□□ -0.68
RAE1-202ENST00000395840 C8orf58Q8NAV2 365 aa10.82□□□□□ -0.68
RAE1-202ENST00000395840 KIF18AQ8NI77 898 aa10.82□□□□□ -0.68
RAE1-202ENST00000395840 ERVV-1B6SEH8 477 aa10.82□□□□□ -0.68
RAE1-202ENST00000395840 MYCNP04198 464 aaPredicted RBP10.82□□□□□ -0.68
RAE1-202ENST00000395840 CLEC4GQ6UXB4 293 aa10.82□□□□□ -0.68
RAE1-202ENST00000395840 KRT222Q8N1A0 295 aa10.82□□□□□ -0.68
RAE1-202ENST00000395840 KCNG1Q9UIX4 513 aa10.82□□□□□ -0.68
RAE1-202ENST00000395840 USP42Q9H9J4 1324 aaKnown RBP10.82□□□□□ -0.68
RAE1-202ENST00000395840 PRAMEF22A3QJZ6 481 aa10.81□□□□□ -0.68
RAE1-202ENST00000395840 EXOSC9Q06265 439 aaKnown RBP10.81□□□□□ -0.68
RAE1-202ENST00000395840 MVPQ14764 893 aaKnown RBP10.81□□□□□ -0.68
RAE1-202ENST00000395840 EFCC1Q9HA90 598 aa10.81□□□□□ -0.68
RAE1-202ENST00000395840 ADCY5O95622 1261 aa10.81□□□□□ -0.68
RAE1-202ENST00000395840 DDX58O95786 925 aaKnown RBP10.81□□□□□ -0.68
RAE1-202ENST00000395840 DZIP3Q86Y13 1208 aaKnown RBP10.81□□□□□ -0.68
RAE1-202ENST00000395840 LOC102724159A0A0B4J2E5 919 aa10.8□□□□□ -0.68
RAE1-202ENST00000395840 NBPF26B4DH59 902 aa10.8□□□□□ -0.68
RAE1-202ENST00000395840 HNRNPH2P55795 449 aaKnown RBP10.8□□□□□ -0.68
RAE1-202ENST00000395840 PWP2Q15269 919 aaKnown RBP10.8□□□□□ -0.68
RAE1-202ENST00000395840 HSP90AB3PQ58FF7 597 aa10.8□□□□□ -0.68
RAE1-202ENST00000395840 NBPF10Q6P3W6 841 aaKnown RBP10.8□□□□□ -0.68
RAE1-202ENST00000395840 NBPF15Q8N660 670 aa10.8□□□□□ -0.68
RAE1-202ENST00000395840 KIAA1524Q8TCG1 905 aa10.8□□□□□ -0.68
RAE1-202ENST00000395840 CLGNO14967 610 aa10.8□□□□□ -0.68
RAE1-202ENST00000395840 VAMP4O75379 141 aa10.8□□□□□ -0.68
RAE1-202ENST00000395840 NAA30Q147X3 362 aaPredicted RBP10.8□□□□□ -0.68
RAE1-202ENST00000395840 ZNF330Q9Y3S2 320 aaPredicted RBP10.8□□□□□ -0.68
RAE1-202ENST00000395840 CACNA1FO60840 1977 aa10.8□□□□□ -0.68
RAE1-202ENST00000395840 COL24A1Q17RW2 1714 aa10.8□□□□□ -0.68
RAE1-202ENST00000395840 MBD3O95983 291 aa10.79□□□□□ -0.68
RAE1-202ENST00000395840 RAD51AP2Q09MP3 1159 aa10.79□□□□□ -0.68
RAE1-202ENST00000395840 SYCP1Q15431 976 aa10.79□□□□□ -0.68
RAE1-202ENST00000395840 PYCARDQ9ULZ3 195 aa10.79□□□□□ -0.68
RAE1-202ENST00000395840 C4AP0C0L4 1744 aa10.79□□□□□ -0.68
RAE1-202ENST00000395840 ELL2O00472 640 aaPredicted RBP10.79□□□□□ -0.68
RAE1-202ENST00000395840 MYL6BP14649 208 aa10.79□□□□□ -0.68
RAE1-202ENST00000395840 HDAC1Q13547 482 aaPredicted RBP10.79□□□□□ -0.68
RAE1-202ENST00000395840 PDIA6Q15084 440 aa10.79□□□□□ -0.68
RAE1-202ENST00000395840 KRT24Q2M2I5 525 aa10.79□□□□□ -0.68
RAE1-202ENST00000395840 ALDH1L2Q3SY69 923 aa10.79□□□□□ -0.68
RAE1-202ENST00000395840 CHPF2Q9P2E5 772 aa10.79□□□□□ -0.68
RAE1-202ENST00000395840 RSPH14Q9UHP6 348 aa10.79□□□□□ -0.68
RAE1-202ENST00000395840 ZDHHC9Q9Y397 364 aa10.79□□□□□ -0.68
RAE1-202ENST00000395840 LRP5O75197 1615 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms