RNA–Protein interactions for RNA: ENST00000395548.6

AP3S1-202, Transcript of adaptor related protein complex 3 subunit sigma 1, humanhuman

TSL 1 (best)

Gene AP3S1, Length 1,180 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1-202ENST00000395548 ARHGAP23Q9P227 1491 aa8.87□□□□□ -0.99
AP3S1-202ENST00000395548 NCOA2Q15596 1464 aa8.86□□□□□ -0.99
AP3S1-202ENST00000395548 KIF3BO15066 747 aa8.86□□□□□ -0.99
AP3S1-202ENST00000395548 ATP9BO43861 1147 aa8.86□□□□□ -0.99
AP3S1-202ENST00000395548 ATP1A2P50993 1020 aa8.86□□□□□ -0.99
AP3S1-202ENST00000395548 AIDAQ96BJ3 306 aa8.86□□□□□ -0.99
AP3S1-202ENST00000395548 RUBCNLQ9H714 662 aa8.86□□□□□ -0.99
AP3S1-202ENST00000395548 ENAMQ9NRM1 1142 aa8.86□□□□□ -0.99
AP3S1-202ENST00000395548 UNC13BO14795 1591 aa8.86□□□□□ -0.99
AP3S1-202ENST00000395548 KDM5AP29375 1690 aaKnown RBP8.85□□□□□ -0.99
AP3S1-202ENST00000395548 USP17L3A6NCW0 530 aa8.85□□□□□ -0.99
AP3S1-202ENST00000395548 USP17L4A6NCW7 530 aa8.85□□□□□ -0.99
AP3S1-202ENST00000395548 A6NJR5 290 aa8.85□□□□□ -0.99
AP3S1-202ENST00000395548 ARHGEF15O94989 841 aa8.85□□□□□ -0.99
AP3S1-202ENST00000395548 RANGAP1P46060 587 aaPredicted RBP8.85□□□□□ -0.99
AP3S1-202ENST00000395548 HNRNPMP52272 730 aaKnown RBP eCLIP8.85□□□□□ -0.99
AP3S1-202ENST00000395548 NBPF1Q3BBV0 1214 aa8.85□□□□□ -0.99
AP3S1-202ENST00000395548 USP17L2Q6R6M4 530 aa8.85□□□□□ -0.99
AP3S1-202ENST00000395548 LYPD4Q6UWN0 246 aa8.85□□□□□ -0.99
AP3S1-202ENST00000395548 BRINP3Q76B58 766 aa8.85□□□□□ -0.99
AP3S1-202ENST00000395548 USP17L1Q7RTZ2 530 aa8.85□□□□□ -0.99
AP3S1-202ENST00000395548 CRISPLD1Q9H336 500 aa8.85□□□□□ -0.99
AP3S1-202ENST00000395548 ZNF777Q9ULD5 760 aaPredicted RBP8.85□□□□□ -0.99
AP3S1-202ENST00000395548 PREX2Q70Z35 1606 aa8.84□□□□□ -0.99
AP3S1-202ENST00000395548 RTEL1-TNFRSF6BF6WH68 1400 aa8.84□□□□□ -0.99
AP3S1-202ENST00000395548 RNF225M0QZC1 329 aaPredicted RBP8.84□□□□□ -0.99
AP3S1-202ENST00000395548 CELA2BP08218 269 aaPredicted RBP8.84□□□□□ -0.99
AP3S1-202ENST00000395548 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.84□□□□□ -0.99
AP3S1-202ENST00000395548 SLC26A8Q96RN1 970 aa8.84□□□□□ -0.99
AP3S1-202ENST00000395548 UCN2Q96RP3 112 aa8.84□□□□□ -0.99
AP3S1-202ENST00000395548 C19orf44Q9H6X5 657 aa8.84□□□□□ -0.99
AP3S1-202ENST00000395548 ZNF358Q9NW07 568 aa8.84□□□□□ -0.99
AP3S1-202ENST00000395548 CABP1Q9NZU7 370 aa8.84□□□□□ -0.99
AP3S1-202ENST00000395548 DHX29Q7Z478 1369 aaKnown RBP8.84□□□□□ -0.99
AP3S1-202ENST00000395548 PNPLA6Q8IY17 1366 aa8.84□□□□□ -0.99
AP3S1-202ENST00000395548 THBS1P07996 1170 aa8.83□□□□□ -1
AP3S1-202ENST00000395548 TATP17735 454 aaPredicted RBP8.83□□□□□ -1
AP3S1-202ENST00000395548 MAP2K3P46734 347 aa8.83□□□□□ -1
AP3S1-202ENST00000395548 PRELPP51888 382 aa8.83□□□□□ -1
AP3S1-202ENST00000395548 MARSP56192 900 aaKnown RBP8.83□□□□□ -1
AP3S1-202ENST00000395548 FIGNL1Q6PIW4 674 aa8.83□□□□□ -1
AP3S1-202ENST00000395548 GLMNQ92990 594 aa8.83□□□□□ -1
AP3S1-202ENST00000395548 IQSEC3Q9UPP2 1182 aaPredicted RBP8.83□□□□□ -1
AP3S1-202ENST00000395548 ADGBQ8N7X0 1667 aa8.83□□□□□ -1
AP3S1-202ENST00000395548 INO80Q9ULG1 1556 aaPredicted RBP8.82□□□□□ -1
AP3S1-202ENST00000395548 KIAA1107Q9UPP5 1409 aa8.82□□□□□ -1
AP3S1-202ENST00000395548 KCNMA1Q12791 1236 aa8.82□□□□□ -1
AP3S1-202ENST00000395548 NLRP8Q86W28 1048 aa8.82□□□□□ -1
AP3S1-202ENST00000395548 SCHIP1Q9P0W5 487 aaPredicted RBP8.82□□□□□ -1
AP3S1-202ENST00000395548 MKRN1Q9UHC7 482 aaKnown RBP8.82□□□□□ -1
AP3S1-202ENST00000395548 ATXN7L1Q9ULK2 861 aaPredicted RBP8.82□□□□□ -1
AP3S1-202ENST00000395548 RALGAPBQ86X10 1494 aa8.82□□□□□ -1
AP3S1-202ENST00000395548 PLEKHH2Q8IVE3 1493 aa8.82□□□□□ -1
AP3S1-202ENST00000395548 PTCH1Q13635 1447 aa8.81□□□□□ -1
AP3S1-202ENST00000395548 SYCP2Q9BX26 1530 aa8.81□□□□□ -1
AP3S1-202ENST00000395548 MROH1Q8NDA8 1641 aa8.81□□□□□ -1
AP3S1-202ENST00000395548 UBR1Q8IWV7 1749 aa8.81□□□□□ -1
AP3S1-202ENST00000395548 BCRP11274 1271 aa8.81□□□□□ -1
AP3S1-202ENST00000395548 UBAP2LQ14157 1087 aaKnown RBP8.81□□□□□ -1
AP3S1-202ENST00000395548 ARSJQ5FYB0 599 aaPredicted RBP8.81□□□□□ -1
AP3S1-202ENST00000395548 CCDC102BQ68D86 513 aa8.81□□□□□ -1
AP3S1-202ENST00000395548 ZNF295-AS1Q8N0V1 137 aa8.81□□□□□ -1
AP3S1-202ENST00000395548 LARGE2Q8N3Y3 721 aa8.81□□□□□ -1
AP3S1-202ENST00000395548 SPON1Q9HCB6 807 aa8.81□□□□□ -1
AP3S1-202ENST00000395548 LRRC4BQ9NT99 713 aa8.81□□□□□ -1
AP3S1-202ENST00000395548 DNAAF2Q9NVR5 837 aaKnown RBP8.81□□□□□ -1
AP3S1-202ENST00000395548 ZDHHC3Q9NYG2 299 aa8.81□□□□□ -1
AP3S1-202ENST00000395548 RBM19Q9Y4C8 960 aaKnown RBP8.81□□□□□ -1
AP3S1-202ENST00000395548 TMEM2Q9UHN6 1383 aa8.81□□□□□ -1
AP3S1-202ENST00000395548 PALM3A6NDB9 673 aaPredicted RBP8.8□□□□□ -1
AP3S1-202ENST00000395548 ZBTB7BO15156 539 aaPredicted RBP8.8□□□□□ -1
AP3S1-202ENST00000395548 OGFOD1Q8N543 542 aa8.8□□□□□ -1
AP3S1-202ENST00000395548 TPCN2Q8NHX9 752 aa8.8□□□□□ -1
AP3S1-202ENST00000395548 ACDQ96AP0 544 aa8.8□□□□□ -1
AP3S1-202ENST00000395548 SCARF2Q96GP6 870 aaPredicted RBP8.8□□□□□ -1
AP3S1-202ENST00000395548 CALR3Q96L12 384 aaKnown RBP8.8□□□□□ -1
AP3S1-202ENST00000395548 TFIP11Q9UBB9 837 aaKnown RBP8.8□□□□□ -1
AP3S1-202ENST00000395548 ERVK-7P63135 1459 aa8.79□□□□□ -1
AP3S1-202ENST00000395548 ATP4AP20648 1035 aa8.79□□□□□ -1
AP3S1-202ENST00000395548 CLDN10P78369 228 aa8.79□□□□□ -1
AP3S1-202ENST00000395548 ZCCHC2Q9C0B9 1178 aaKnown RBP8.79□□□□□ -1
AP3S1-202ENST00000395548 PCDHGC4Q9Y5F7 938 aa8.79□□□□□ -1
AP3S1-202ENST00000395548 USP3Q9Y6I4 520 aa8.79□□□□□ -1
AP3S1-202ENST00000395548 ARHGAP35Q9NRY4 1499 aa8.78□□□□□ -1
AP3S1-202ENST00000395548 A0A1W2PNR3 127 aa8.78□□□□□ -1
AP3S1-202ENST00000395548 BNIP3LO60238 219 aa8.78□□□□□ -1
AP3S1-202ENST00000395548 PPP1R15AO75807 674 aaPredicted RBP8.78□□□□□ -1
AP3S1-202ENST00000395548 FGFR3P22607 806 aa8.78□□□□□ -1
AP3S1-202ENST00000395548 FOXK2Q01167 660 aa8.78□□□□□ -1
AP3S1-202ENST00000395548 TEAD4Q15561 434 aa8.78□□□□□ -1
AP3S1-202ENST00000395548 ABHD17AQ96GS6 310 aa8.78□□□□□ -1
AP3S1-202ENST00000395548 OXCT2Q9BYC2 517 aaPredicted RBP8.78□□□□□ -1
AP3S1-202ENST00000395548 NDFIP2Q9NV92 336 aa8.78□□□□□ -1
AP3S1-202ENST00000395548 GJA3Q9Y6H8 435 aa8.78□□□□□ -1
AP3S1-202ENST00000395548 SPHKAPQ2M3C7 1700 aa8.77□□□□□ -1
AP3S1-202ENST00000395548 M0R2N6 131 aa8.77□□□□□ -1.01
AP3S1-202ENST00000395548 BMP4P12644 408 aa8.77□□□□□ -1.01
AP3S1-202ENST00000395548 NOS2P35228 1153 aa8.77□□□□□ -1.01
AP3S1-202ENST00000395548 EPHA4P54764 986 aa8.77□□□□□ -1.01
AP3S1-202ENST00000395548 KRT27Q7Z3Y8 459 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms