RNA–Protein interactions for RNA: ENST00000394601.8

PTBP1-204, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 1 (best) BASIC

Gene PTBP1, Length 3,185 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-204ENST00000394601 PIP4K2AP48426 406 aaPredicted RBP18.56■□□□□ 0.56
PTBP1-204ENST00000394601 PRPF40BQ6NWY9 871 aaKnown RBP18.56■□□□□ 0.56
PTBP1-204ENST00000394601 IFNL2Q8IZJ0 200 aa18.56■□□□□ 0.56
PTBP1-204ENST00000394601 MBD3O95983 291 aa18.56■□□□□ 0.56
PTBP1-204ENST00000394601 TATP17735 454 aaPredicted RBP18.56■□□□□ 0.56
PTBP1-204ENST00000394601 SYT1P21579 422 aa18.56■□□□□ 0.56
PTBP1-204ENST00000394601 RIC3Q7Z5B4 369 aa18.56■□□□□ 0.56
PTBP1-204ENST00000394601 NAP1L2Q9ULW6 460 aaPredicted RBP18.56■□□□□ 0.56
PTBP1-204ENST00000394601 HDAC5Q9UQL6 1122 aa18.56■□□□□ 0.56
PTBP1-204ENST00000394601 ZNF500O60304 480 aaPredicted RBP18.56■□□□□ 0.56
PTBP1-204ENST00000394601 PTPN12Q05209 780 aaKnown RBP18.56■□□□□ 0.56
PTBP1-204ENST00000394601 DCAF5Q96JK2 942 aa18.56■□□□□ 0.56
PTBP1-204ENST00000394601 MYD88Q99836 296 aa18.56■□□□□ 0.56
PTBP1-204ENST00000394601 COPRSQ9NQ92 184 aa18.56■□□□□ 0.56
PTBP1-204ENST00000394601 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.55■□□□□ 0.56
PTBP1-204ENST00000394601 MTERF4Q7Z6M4 381 aaKnown RBP18.55■□□□□ 0.56
PTBP1-204ENST00000394601 SIL1Q9H173 461 aa18.55■□□□□ 0.56
PTBP1-204ENST00000394601 ZSCAN22P10073 491 aaPredicted RBP18.54■□□□□ 0.56
PTBP1-204ENST00000394601 GTF2E1P29083 439 aaPredicted RBP18.54■□□□□ 0.56
PTBP1-204ENST00000394601 CREB3L3Q68CJ9 461 aa18.54■□□□□ 0.56
PTBP1-204ENST00000394601 ANKRD13DQ6ZTN6 518 aa18.54■□□□□ 0.56
PTBP1-204ENST00000394601 PDCL2Q8N4E4 241 aa18.54■□□□□ 0.56
PTBP1-204ENST00000394601 RUFY2Q8WXA3 655 aa18.54■□□□□ 0.56
PTBP1-204ENST00000394601 ERICH4A6NGS2 130 aa18.54■□□□□ 0.56
PTBP1-204ENST00000394601 CHRNA2Q15822 529 aa18.54■□□□□ 0.56
PTBP1-204ENST00000394601 RBM8AQ9Y5S9 174 aaKnown RBP18.54■□□□□ 0.56
PTBP1-204ENST00000394601 KCPQ6ZWJ8 1503 aa18.54■□□□□ 0.56
PTBP1-204ENST00000394601 SNRPA1P09661 255 aaKnown RBP18.54■□□□□ 0.56
PTBP1-204ENST00000394601 G3BP1Q13283 466 aaKnown RBP eCLIP18.54■□□□□ 0.562e-9■□□□□ 9.4
PTBP1-204ENST00000394601 ME3Q16798 604 aa18.54■□□□□ 0.56
PTBP1-204ENST00000394601 GPATCH3Q96I76 525 aa18.54■□□□□ 0.56
PTBP1-204ENST00000394601 KIF3AQ9Y496 699 aa18.54■□□□□ 0.56
PTBP1-204ENST00000394601 SPATA31A3Q5VYP0 1347 aa18.54■□□□□ 0.56
PTBP1-204ENST00000394601 ZNF589Q86UQ0 364 aaPredicted RBP18.53■□□□□ 0.56
PTBP1-204ENST00000394601 JAKMIP1Q96N16 626 aaKnown RBP18.53■□□□□ 0.56
PTBP1-204ENST00000394601 DBNLQ9UJU6 430 aaKnown RBP18.53■□□□□ 0.56
PTBP1-204ENST00000394601 SLC27A2O14975 620 aa18.52■□□□□ 0.56
PTBP1-204ENST00000394601 NPHP1O15259 732 aa18.52■□□□□ 0.56
PTBP1-204ENST00000394601 STX6O43752 255 aa18.52■□□□□ 0.56
PTBP1-204ENST00000394601 BOLA2Q9H3K6 86 aa18.52■□□□□ 0.56
PTBP1-204ENST00000394601 ZNF710Q8N1W2 664 aa18.52■□□□□ 0.56
PTBP1-204ENST00000394601 TPCN1Q9ULQ1 816 aa18.52■□□□□ 0.56
PTBP1-204ENST00000394601 CNPY2Q9Y2B0 182 aa18.52■□□□□ 0.56
PTBP1-204ENST00000394601 EDC3Q96F86 508 aaKnown RBP18.52■□□□□ 0.55
PTBP1-204ENST00000394601 PDRG1Q9NUG6 133 aa18.52■□□□□ 0.55
PTBP1-204ENST00000394601 NBPF26B4DH59 902 aa18.51■□□□□ 0.55
PTBP1-204ENST00000394601 NBPF14Q5TI25 921 aa18.51■□□□□ 0.55
PTBP1-204ENST00000394601 NBPF10Q6P3W6 841 aaKnown RBP18.51■□□□□ 0.55
PTBP1-204ENST00000394601 NBPF15Q8N660 670 aa18.51■□□□□ 0.55
PTBP1-204ENST00000394601 MTMR6Q9Y217 621 aa18.51■□□□□ 0.55
PTBP1-204ENST00000394601 ABCA3Q99758 1704 aa18.51■□□□□ 0.55
PTBP1-204ENST00000394601 CHGBP05060 677 aa18.51■□□□□ 0.55
PTBP1-204ENST00000394601 NOLC1Q14978 699 aaKnown RBP eCLIP18.51■□□□□ 0.552e-6■■□□□ 11.7
PTBP1-204ENST00000394601 F13A1P00488 732 aa18.5■□□□□ 0.55
PTBP1-204ENST00000394601 ATF3P18847 181 aa18.5■□□□□ 0.55
PTBP1-204ENST00000394601 TSGA10IPQ3SY00 556 aa18.5■□□□□ 0.55
PTBP1-204ENST00000394601 DDX54Q8TDD1 881 aaKnown RBP18.5■□□□□ 0.55
PTBP1-204ENST00000394601 ZNF592Q92610 1267 aa18.5■□□□□ 0.55
PTBP1-204ENST00000394601 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.5■□□□□ 0.55
PTBP1-204ENST00000394601 USPL1Q5W0Q7 1092 aa18.5■□□□□ 0.55
PTBP1-204ENST00000394601 ALDH8A1Q9H2A2 487 aaPredicted RBP18.5■□□□□ 0.55
PTBP1-204ENST00000394601 LAMA4Q16363 1823 aa18.5■□□□□ 0.55
PTBP1-204ENST00000394601 HS1BP3Q53T59 392 aa18.5■□□□□ 0.55
PTBP1-204ENST00000394601 CCDC83Q8IWF9 413 aa18.5■□□□□ 0.55
PTBP1-204ENST00000394601 BCL2L12Q9HB09 334 aa18.5■□□□□ 0.55
PTBP1-204ENST00000394601 GJB2P29033 226 aa18.49■□□□□ 0.55
PTBP1-204ENST00000394601 NEXNQ0ZGT2 675 aa18.49■□□□□ 0.55
PTBP1-204ENST00000394601 TNNI3KQ59H18 835 aa18.49■□□□□ 0.55
PTBP1-204ENST00000394601 FMNL2Q96PY5 1086 aa18.49■□□□□ 0.55
PTBP1-204ENST00000394601 TSPY26PQ9H489 355 aa18.49■□□□□ 0.55
PTBP1-204ENST00000394601 FPGT-TNNI3KV9GXZ4 949 aa18.49■□□□□ 0.55
PTBP1-204ENST00000394601 TOGARAM1Q9Y4F4 1720 aa18.49■□□□□ 0.55
PTBP1-204ENST00000394601 HIP1O00291 1037 aa18.49■□□□□ 0.55
PTBP1-204ENST00000394601 ATP5JP18859 108 aa18.49■□□□□ 0.55
PTBP1-204ENST00000394601 FOXO4P98177 505 aa18.49■□□□□ 0.55
PTBP1-204ENST00000394601 TFCP2Q12800 502 aa18.49■□□□□ 0.55
PTBP1-204ENST00000394601 CYP46A1Q9Y6A2 500 aa18.49■□□□□ 0.55
PTBP1-204ENST00000394601 TAF5LO75529 589 aa18.48■□□□□ 0.55
PTBP1-204ENST00000394601 HCLS1P14317 486 aaPredicted RBP18.48■□□□□ 0.55
PTBP1-204ENST00000394601 TOB2Q14106 344 aaPredicted RBP18.48■□□□□ 0.55
PTBP1-204ENST00000394601 ZNF609O15014 1411 aa18.48■□□□□ 0.55
PTBP1-204ENST00000394601 UBE3BQ7Z3V4 1068 aa18.48■□□□□ 0.55
PTBP1-204ENST00000394601 MYRIPQ8NFW9 859 aa18.48■□□□□ 0.55
PTBP1-204ENST00000394601 SH2B1Q9NRF2 756 aaPredicted RBP18.48■□□□□ 0.55
PTBP1-204ENST00000394601 CHAF1AQ13111 956 aaPredicted RBP18.47■□□□□ 0.55
PTBP1-204ENST00000394601 ATP5J2-PTCD1G3V325 749 aa18.47■□□□□ 0.55
PTBP1-204ENST00000394601 PTCD1O75127 700 aaKnown RBP18.47■□□□□ 0.55
PTBP1-204ENST00000394601 PLBD2Q8NHP8 589 aa18.47■□□□□ 0.55
PTBP1-204ENST00000394601 ZSCAN31Q96LW9 406 aaPredicted RBP18.47■□□□□ 0.55
PTBP1-204ENST00000394601 NDUFB9Q9Y6M9 179 aa18.47■□□□□ 0.55
PTBP1-204ENST00000394601 KCNJ4P48050 445 aa18.46■□□□□ 0.55
PTBP1-204ENST00000394601 NAA30Q147X3 362 aaPredicted RBP18.46■□□□□ 0.55
PTBP1-204ENST00000394601 NECAB1Q8N987 351 aa18.46■□□□□ 0.55
PTBP1-204ENST00000394601 SMC3Q9UQE7 1217 aa18.46■□□□□ 0.55
PTBP1-204ENST00000394601 H7C1W4 665 aa18.46■□□□□ 0.55
PTBP1-204ENST00000394601 TERF1P54274 439 aa18.46■□□□□ 0.55
PTBP1-204ENST00000394601 CERS3Q8IU89 383 aa18.46■□□□□ 0.55
PTBP1-204ENST00000394601 RFX7Q2KHR2 1363 aa18.46■□□□□ 0.55
PTBP1-204ENST00000394601 TNS2Q63HR2 1409 aa18.46■□□□□ 0.55
PTBP1-204ENST00000394601 ADCY5O95622 1261 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms