RNA–Protein interactions for RNA: ENST00000392556.8

TRAF3IP2-208, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best) BASIC

Gene TRAF3IP2, Length 2,188 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-208ENST00000392556 NGEFQ8N5V2 710 aa14.11□□□□□ -0.15
TRAF3IP2-208ENST00000392556 JDP2Q8WYK2 163 aa14.11□□□□□ -0.15
TRAF3IP2-208ENST00000392556 CREBZFQ9NS37 354 aa14.11□□□□□ -0.15
TRAF3IP2-208ENST00000392556 FAM177BA6PVY3 158 aa14.1□□□□□ -0.15
TRAF3IP2-208ENST00000392556 FZD9O00144 591 aa14.1□□□□□ -0.15
TRAF3IP2-208ENST00000392556 HOXB7P09629 217 aa14.1□□□□□ -0.15
TRAF3IP2-208ENST00000392556 MCM4P33991 863 aa14.1□□□□□ -0.15
TRAF3IP2-208ENST00000392556 SLC10A5Q5PT55 438 aa14.1□□□□□ -0.15
TRAF3IP2-208ENST00000392556 SYNE4Q8N205 404 aa14.1□□□□□ -0.15
TRAF3IP2-208ENST00000392556 THUMPD2Q9BTF0 503 aaKnown RBP14.1□□□□□ -0.15
TRAF3IP2-208ENST00000392556 ABCC12Q96J65 1359 aa14.1□□□□□ -0.15
TRAF3IP2-208ENST00000392556 SKAP1Q86WV1 359 aa14.1□□□□□ -0.15
TRAF3IP2-208ENST00000392556 GPC2Q8N158 579 aa14.1□□□□□ -0.15
TRAF3IP2-208ENST00000392556 NLRP3Q96P20 1036 aa14.1□□□□□ -0.15
TRAF3IP2-208ENST00000392556 CRBNQ96SW2 442 aa14.1□□□□□ -0.15
TRAF3IP2-208ENST00000392556 ZBTB3Q9H5J0 574 aa14.1□□□□□ -0.15
TRAF3IP2-208ENST00000392556 HACL1Q9UJ83 578 aa14.1□□□□□ -0.15
TRAF3IP2-208ENST00000392556 SNED1Q8TER0 1413 aa14.09□□□□□ -0.15
TRAF3IP2-208ENST00000392556 NTSR2O95665 410 aa14.09□□□□□ -0.15
TRAF3IP2-208ENST00000392556 RUNDC1Q96C34 613 aa14.09□□□□□ -0.15
TRAF3IP2-208ENST00000392556 UTP14AQ9BVJ6 771 aaKnown RBP14.09□□□□□ -0.15
TRAF3IP2-208ENST00000392556 TAF1DQ9H5J8 278 aaPredicted RBP14.09□□□□□ -0.15
TRAF3IP2-208ENST00000392556 NUP98P52948 1817 aa14.09□□□□□ -0.15
TRAF3IP2-208ENST00000392556 WDR43Q15061 677 aaKnown RBP eCLIP14.09□□□□□ -0.15
TRAF3IP2-208ENST00000392556 SUSD4Q5VX71 490 aa14.09□□□□□ -0.15
TRAF3IP2-208ENST00000392556 LRP10Q7Z4F1 713 aa14.09□□□□□ -0.15
TRAF3IP2-208ENST00000392556 ZNF277Q9NRM2 450 aaPredicted RBP14.09□□□□□ -0.15
TRAF3IP2-208ENST00000392556 UBN2Q6ZU65 1347 aa14.09□□□□□ -0.15
TRAF3IP2-208ENST00000392556 KIF20AO95235 890 aa14.08□□□□□ -0.16
TRAF3IP2-208ENST00000392556 EIF6P56537 245 aaKnown RBP14.08□□□□□ -0.16
TRAF3IP2-208ENST00000392556 PDIA6Q15084 440 aa14.08□□□□□ -0.16
TRAF3IP2-208ENST00000392556 NUTM1Q86Y26 1132 aa14.08□□□□□ -0.16
TRAF3IP2-208ENST00000392556 SUPT20HQ8NEM7 779 aa14.08□□□□□ -0.16
TRAF3IP2-208ENST00000392556 CACNA1SQ13698 1873 aa14.08□□□□□ -0.16
TRAF3IP2-208ENST00000392556 CHL1O00533 1208 aa14.07□□□□□ -0.16
TRAF3IP2-208ENST00000392556 GPTP24298 496 aa14.07□□□□□ -0.16
TRAF3IP2-208ENST00000392556 DDX21Q9NR30 783 aaKnown RBP eCLIP14.07□□□□□ -0.16
TRAF3IP2-208ENST00000392556 ZHX1Q9UKY1 873 aaPredicted RBP14.07□□□□□ -0.16
TRAF3IP2-208ENST00000392556 HTRA3P83110 453 aa14.07□□□□□ -0.16
TRAF3IP2-208ENST00000392556 TMC4Q7Z404 712 aa14.07□□□□□ -0.16
TRAF3IP2-208ENST00000392556 CHMP4AQ9BY43 222 aa14.07□□□□□ -0.16
TRAF3IP2-208ENST00000392556 PPEF1O14829 653 aaPredicted RBP14.06□□□□□ -0.16
TRAF3IP2-208ENST00000392556 EIF2S2P20042 333 aaKnown RBP14.06□□□□□ -0.16
TRAF3IP2-208ENST00000392556 GTPBP4Q9BZE4 634 aaKnown RBP14.06□□□□□ -0.16
TRAF3IP2-208ENST00000392556 PASKQ96RG2 1323 aa14.06□□□□□ -0.16
TRAF3IP2-208ENST00000392556 TRAK2O60296 914 aa14.06□□□□□ -0.16
TRAF3IP2-208ENST00000392556 BBOX1O75936 387 aa14.06□□□□□ -0.16
TRAF3IP2-208ENST00000392556 EPHX2P34913 555 aa14.06□□□□□ -0.16
TRAF3IP2-208ENST00000392556 CHMP4BQ9H444 224 aaKnown RBP14.06□□□□□ -0.16
TRAF3IP2-208ENST00000392556 ZNF541Q9H0D2 1346 aa14.06□□□□□ -0.16
TRAF3IP2-208ENST00000392556 ZSCAN30Q86W11 494 aa14.05□□□□□ -0.16
TRAF3IP2-208ENST00000392556 ATP6V0A2Q9Y487 856 aa14.05□□□□□ -0.16
TRAF3IP2-208ENST00000392556 DYNC1I1O14576 645 aa14.05□□□□□ -0.16
TRAF3IP2-208ENST00000392556 LMOD1P29536 600 aaPredicted RBP14.05□□□□□ -0.16
TRAF3IP2-208ENST00000392556 TCIRG1Q13488 830 aa14.05□□□□□ -0.16
TRAF3IP2-208ENST00000392556 PPP4R3BQ5MIZ7 849 aa14.05□□□□□ -0.16
TRAF3IP2-208ENST00000392556 TMEM51Q9NW97 253 aa14.05□□□□□ -0.16
TRAF3IP2-208ENST00000392556 ZSCAN20P17040 1043 aaPredicted RBP14.04□□□□□ -0.16
TRAF3IP2-208ENST00000392556 COPS6Q7L5N1 327 aa14.04□□□□□ -0.16
TRAF3IP2-208ENST00000392556 LARGE2Q8N3Y3 721 aa14.04□□□□□ -0.16
TRAF3IP2-208ENST00000392556 PPP1R9BQ96SB3 815 aa14.04□□□□□ -0.16
TRAF3IP2-208ENST00000392556 FAM13BQ9NYF5 915 aa14.04□□□□□ -0.16
TRAF3IP2-208ENST00000392556 NLRP10Q86W26 655 aa14.03□□□□□ -0.16
TRAF3IP2-208ENST00000392556 RTFDC1Q9BY42 306 aaPredicted RBP14.03□□□□□ -0.16
TRAF3IP2-208ENST00000392556 DBF4Q9UBU7 674 aaPredicted RBP14.03□□□□□ -0.16
TRAF3IP2-208ENST00000392556 SH3TC1Q8TE82 1336 aa14.03□□□□□ -0.16
TRAF3IP2-208ENST00000392556 TMEM88BA6NKF7 163 aa14.03□□□□□ -0.16
TRAF3IP2-208ENST00000392556 SP8Q8IXZ3 490 aa14.03□□□□□ -0.16
TRAF3IP2-208ENST00000392556 NIM1KQ8IY84 436 aa14.03□□□□□ -0.16
TRAF3IP2-208ENST00000392556 XAGE3Q8WTP9 111 aa14.03□□□□□ -0.16
TRAF3IP2-208ENST00000392556 CFAP44Q96MT7 982 aa14.03□□□□□ -0.16
TRAF3IP2-208ENST00000392556 SLKQ9H2G2 1235 aaPredicted RBP14.03□□□□□ -0.16
TRAF3IP2-208ENST00000392556 CEP350Q5VT06 3117 aa14.03□□□□□ -0.16
TRAF3IP2-208ENST00000392556 CNTNAP1P78357 1384 aa14.02□□□□□ -0.16
TRAF3IP2-208ENST00000392556 HSP90B1P14625 803 aaKnown RBP14.02□□□□□ -0.16
TRAF3IP2-208ENST00000392556 CCDC173Q0VFZ6 552 aa14.02□□□□□ -0.16
TRAF3IP2-208ENST00000392556 TAF3Q5VWG9 929 aa14.02□□□□□ -0.16
TRAF3IP2-208ENST00000392556 OLFM4Q6UX06 510 aa14.02□□□□□ -0.16
TRAF3IP2-208ENST00000392556 PLBD2Q8NHP8 589 aa14.02□□□□□ -0.16
TRAF3IP2-208ENST00000392556 CCDC94Q9BW85 323 aaPredicted RBP14.02□□□□□ -0.16
TRAF3IP2-208ENST00000392556 HYPKQ9NX55 129 aa14.02□□□□□ -0.16
TRAF3IP2-208ENST00000392556 TRIM35Q9UPQ4 493 aa14.02□□□□□ -0.16
TRAF3IP2-208ENST00000392556 ADAMTSL1Q8N6G6 1762 aa14.02□□□□□ -0.17
TRAF3IP2-208ENST00000392556 CDHR2Q9BYE9 1310 aa14.02□□□□□ -0.17
TRAF3IP2-208ENST00000392556 LETM1O95202 739 aaPredicted RBP14.02□□□□□ -0.17
TRAF3IP2-208ENST00000392556 ITGBL1O95965 494 aaPredicted RBP14.02□□□□□ -0.17
TRAF3IP2-208ENST00000392556 EAPPQ56P03 285 aaPredicted RBP14.02□□□□□ -0.17
TRAF3IP2-208ENST00000392556 USP50Q70EL3 339 aaPredicted RBP14.02□□□□□ -0.17
TRAF3IP2-208ENST00000392556 DDX46Q7L014 1031 aaKnown RBP14.02□□□□□ -0.17
TRAF3IP2-208ENST00000392556 CLEC11AQ9Y240 323 aa14.02□□□□□ -0.17
TRAF3IP2-208ENST00000392556 POTEIP0CG38 1075 aa14.01□□□□□ -0.17
TRAF3IP2-208ENST00000392556 POTEJP0CG39 1038 aa14.01□□□□□ -0.17
TRAF3IP2-208ENST00000392556 HSPA1AP0DMV8 641 aaKnown RBP14.01□□□□□ -0.17
TRAF3IP2-208ENST00000392556 HSPA1BP0DMV9 641 aaKnown RBP14.01□□□□□ -0.17
TRAF3IP2-208ENST00000392556 PROSER3Q2NL68 480 aa14.01□□□□□ -0.17
TRAF3IP2-208ENST00000392556 HDGFL1Q5TGJ6 251 aa14.01□□□□□ -0.17
TRAF3IP2-208ENST00000392556 TRMT112Q9UI30 125 aaKnown RBP14.01□□□□□ -0.17
TRAF3IP2-208ENST00000392556 ABCC4O15439 1325 aa14.01□□□□□ -0.17
TRAF3IP2-208ENST00000392556 ANKRD36CQ5JPF3 1778 aa14.01□□□□□ -0.17
TRAF3IP2-208ENST00000392556 TRIM28Q13263 835 aaKnown RBP14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms