RNA–Protein interactions for RNA: ENST00000382100.7

VLDLR-203, Transcript of very low density lipoprotein receptor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VLDLR, Length 9,163 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VLDLR-203ENST00000382100 WASHC4Q2M389 1173 aa11.22□□□□□ -0.61
VLDLR-203ENST00000382100 CETN3O15182 167 aa11.22□□□□□ -0.61
VLDLR-203ENST00000382100 CEP104O60308 925 aa11.22□□□□□ -0.61
VLDLR-203ENST00000382100 EP400NLQ6ZTU2 488 aa11.22□□□□□ -0.61
VLDLR-203ENST00000382100 PAK3O75914 559 aaPredicted RBP11.22□□□□□ -0.61
VLDLR-203ENST00000382100 CWC27Q6UX04 472 aaKnown RBP11.22□□□□□ -0.61
VLDLR-203ENST00000382100 FGD6Q6ZV73 1430 aa11.22□□□□□ -0.61
VLDLR-203ENST00000382100 TBC1D31Q96DN5 1066 aa11.22□□□□□ -0.61
VLDLR-203ENST00000382100 MAP3K1Q13233 1512 aa11.22□□□□□ -0.61
VLDLR-203ENST00000382100 NUMA1Q14980 2115 aa11.22□□□□□ -0.61
VLDLR-203ENST00000382100 CACYBPQ9HB71 228 aaKnown RBP11.22□□□□□ -0.61
VLDLR-203ENST00000382100 NOC2LQ9Y3T9 749 aaKnown RBP11.22□□□□□ -0.61
VLDLR-203ENST00000382100 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.22□□□□□ -0.61
VLDLR-203ENST00000382100 ITSN2Q9NZM3 1697 aa11.22□□□□□ -0.61
VLDLR-203ENST00000382100 P3H4Q92791 437 aa11.22□□□□□ -0.61
VLDLR-203ENST00000382100 CALML4Q96GE6 196 aa11.22□□□□□ -0.61
VLDLR-203ENST00000382100 TMOD2Q9NZR1 351 aa11.22□□□□□ -0.61
VLDLR-203ENST00000382100 STK26Q9P289 416 aa11.22□□□□□ -0.61
VLDLR-203ENST00000382100 NCOA2Q15596 1464 aa11.22□□□□□ -0.61
VLDLR-203ENST00000382100 RP1P56715 2156 aa11.22□□□□□ -0.61
VLDLR-203ENST00000382100 CALCOCO2Q13137 446 aa11.21□□□□□ -0.61
VLDLR-203ENST00000382100 AP1ARQ63HQ0 302 aa11.21□□□□□ -0.61
VLDLR-203ENST00000382100 MIER3Q7Z3K6 550 aa11.21□□□□□ -0.61
VLDLR-203ENST00000382100 CCDC26Q8TAB7 109 aa11.21□□□□□ -0.61
VLDLR-203ENST00000382100 NRBF2Q96F24 287 aa11.21□□□□□ -0.61
VLDLR-203ENST00000382100 ZC4H2Q9NQZ6 224 aa11.21□□□□□ -0.61
VLDLR-203ENST00000382100 PARP2Q9UGN5 583 aa11.21□□□□□ -0.61
VLDLR-203ENST00000382100 ZNF622Q969S3 477 aaKnown RBP eCLIP11.21□□□□□ -0.61
VLDLR-203ENST00000382100 ZNF692Q9BU19 519 aaPredicted RBP11.21□□□□□ -0.61
VLDLR-203ENST00000382100 MYO7AQ13402 2215 aa11.21□□□□□ -0.61
VLDLR-203ENST00000382100 ATP6V1AP38606 617 aa11.21□□□□□ -0.61
VLDLR-203ENST00000382100 IQCA1Q86XH1 822 aa11.21□□□□□ -0.61
VLDLR-203ENST00000382100 IMPG2Q9BZV3 1241 aa11.21□□□□□ -0.61
VLDLR-203ENST00000382100 SPATS2LQ9NUQ6 558 aaKnown RBP11.21□□□□□ -0.61
VLDLR-203ENST00000382100 RIPK4P57078 832 aa11.21□□□□□ -0.61
VLDLR-203ENST00000382100 MICAL3Q7RTP6 2002 aa11.21□□□□□ -0.61
VLDLR-203ENST00000382100 BAG4O95429 457 aaKnown RBP11.21□□□□□ -0.62
VLDLR-203ENST00000382100 NUP133Q8WUM0 1156 aa11.21□□□□□ -0.62
VLDLR-203ENST00000382100 TNNT1P13805 278 aa11.21□□□□□ -0.62
VLDLR-203ENST00000382100 LMNB1P20700 586 aa11.21□□□□□ -0.62
VLDLR-203ENST00000382100 LMAN1P49257 510 aa11.21□□□□□ -0.62
VLDLR-203ENST00000382100 NEDD9Q14511 834 aa11.21□□□□□ -0.62
VLDLR-203ENST00000382100 TRAK1Q9UPV9 953 aa11.21□□□□□ -0.62
VLDLR-203ENST00000382100 COG6Q9Y2V7 657 aa11.21□□□□□ -0.62
VLDLR-203ENST00000382100 APC2O95996 2303 aa11.2□□□□□ -0.62
VLDLR-203ENST00000382100 CAPN2P17655 700 aa11.2□□□□□ -0.62
VLDLR-203ENST00000382100 APLFQ8IW19 511 aaPredicted RBP11.2□□□□□ -0.62
VLDLR-203ENST00000382100 TMCO5AQ8N6Q1 288 aa11.2□□□□□ -0.62
VLDLR-203ENST00000382100 CPLX4Q7Z7G2 160 aa11.2□□□□□ -0.62
VLDLR-203ENST00000382100 ERICH4A6NGS2 130 aa11.2□□□□□ -0.62
VLDLR-203ENST00000382100 TSPYL2Q9H2G4 693 aaPredicted RBP11.2□□□□□ -0.62
VLDLR-203ENST00000382100 JRKLQ9Y4A0 524 aa11.2□□□□□ -0.62
VLDLR-203ENST00000382100 CCDC102BQ68D86 513 aa11.2□□□□□ -0.62
VLDLR-203ENST00000382100 WHAMMQ8TF30 809 aa11.2□□□□□ -0.62
VLDLR-203ENST00000382100 COMMD10Q9Y6G5 202 aa11.2□□□□□ -0.62
VLDLR-203ENST00000382100 NT5C2P49902 561 aa11.2□□□□□ -0.62
VLDLR-203ENST00000382100 ZNF330Q9Y3S2 320 aaPredicted RBP11.2□□□□□ -0.62
VLDLR-203ENST00000382100 SNAPC4Q5SXM2 1469 aa11.2□□□□□ -0.62
VLDLR-203ENST00000382100 BMP2KLQ5H9B9 411 aa11.2□□□□□ -0.62
VLDLR-203ENST00000382100 CUL5Q93034 780 aa11.2□□□□□ -0.62
VLDLR-203ENST00000382100 MIS12Q9H081 205 aa11.2□□□□□ -0.62
VLDLR-203ENST00000382100 PLEKHO1Q53GL0 409 aaPredicted RBP11.19□□□□□ -0.62
VLDLR-203ENST00000382100 MAIP1Q8WWC4 291 aa11.19□□□□□ -0.62
VLDLR-203ENST00000382100 FAM8A1Q9UBU6 413 aa11.19□□□□□ -0.62
VLDLR-203ENST00000382100 MPNDQ8N594 471 aa11.19□□□□□ -0.62
VLDLR-203ENST00000382100 PSMA7O14818 248 aa11.19□□□□□ -0.62
VLDLR-203ENST00000382100 CALML3P27482 149 aa11.19□□□□□ -0.62
VLDLR-203ENST00000382100 FCHSD1Q86WN1 690 aa11.19□□□□□ -0.62
VLDLR-203ENST00000382100 OPTNQ96CV9 577 aa11.19□□□□□ -0.62
VLDLR-203ENST00000382100 RUNDC3BQ96NL0 473 aa11.19□□□□□ -0.62
VLDLR-203ENST00000382100 GIPC1O14908 333 aa11.19□□□□□ -0.62
VLDLR-203ENST00000382100 RABEP2Q9H5N1 569 aa11.19□□□□□ -0.62
VLDLR-203ENST00000382100 IKQ13123 557 aaPredicted RBP11.19□□□□□ -0.62
VLDLR-203ENST00000382100 MAATS1Q7Z4T9 603 aa11.19□□□□□ -0.62
VLDLR-203ENST00000382100 DTNBP1Q96EV8 351 aa11.19□□□□□ -0.62
VLDLR-203ENST00000382100 PAWRQ96IZ0 340 aaKnown RBP11.19□□□□□ -0.62
VLDLR-203ENST00000382100 SIN3AQ96ST3 1273 aa11.19□□□□□ -0.62
VLDLR-203ENST00000382100 CRBNQ96SW2 442 aa11.19□□□□□ -0.62
VLDLR-203ENST00000382100 COPG1Q9Y678 874 aaKnown RBP11.19□□□□□ -0.62
VLDLR-203ENST00000382100 ZNF318Q5VUA4 2279 aa11.19□□□□□ -0.62
VLDLR-203ENST00000382100 MYH9P35579 1960 aaKnown RBP11.19□□□□□ -0.62
VLDLR-203ENST00000382100 SPECC1L-ADORA2AF8WAN1 911 aa11.19□□□□□ -0.62
VLDLR-203ENST00000382100 PPP2R5BQ15173 497 aa11.19□□□□□ -0.62
VLDLR-203ENST00000382100 NBPF9Q3BBW0 867 aa11.19□□□□□ -0.62
VLDLR-203ENST00000382100 MUM1L1Q5H9M0 696 aa11.19□□□□□ -0.62
VLDLR-203ENST00000382100 INTS8Q75QN2 995 aaKnown RBP11.19□□□□□ -0.62
VLDLR-203ENST00000382100 SDCCAG8Q86SQ7 713 aaPredicted RBP11.19□□□□□ -0.62
VLDLR-203ENST00000382100 ZNF830Q96NB3 372 aaPredicted RBP11.19□□□□□ -0.62
VLDLR-203ENST00000382100 NEK1Q96PY6 1258 aa11.19□□□□□ -0.62
VLDLR-203ENST00000382100 KIF1BPQ96EK5 621 aa11.18□□□□□ -0.62
VLDLR-203ENST00000382100 SPAG17Q6Q759 2223 aa11.18□□□□□ -0.62
VLDLR-203ENST00000382100 ATP8B1O43520 1251 aa11.18□□□□□ -0.62
VLDLR-203ENST00000382100 CALM1P0DP23 149 aa11.18□□□□□ -0.62
VLDLR-203ENST00000382100 CALM2P0DP24 149 aa11.18□□□□□ -0.62
VLDLR-203ENST00000382100 CALM3P0DP25 149 aa11.18□□□□□ -0.62
VLDLR-203ENST00000382100 INF2Q27J81 1249 aa11.18□□□□□ -0.62
VLDLR-203ENST00000382100 PNMA2Q9UL42 364 aa11.18□□□□□ -0.62
VLDLR-203ENST00000382100 ZNF652Q9Y2D9 606 aa11.18□□□□□ -0.62
VLDLR-203ENST00000382100 KIF1CO43896 1103 aaKnown RBP11.18□□□□□ -0.62
VLDLR-203ENST00000382100 AKR1B10O60218 316 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms