RNA–Protein interactions for RNA: ENST00000381867.5

SNPH-201, Transcript of syntaphilin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNPH, Length 5,533 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNPH-201ENST00000381867 NUP88Q99567 741 aaPredicted RBP16.13■□□□□ 0.17
SNPH-201ENST00000381867 KRT222Q8N1A0 295 aa16.13■□□□□ 0.17
SNPH-201ENST00000381867 CCDC178Q5BJE1 867 aa16.13■□□□□ 0.17
SNPH-201ENST00000381867 FSIP1Q8NA03 581 aa16.13■□□□□ 0.17
SNPH-201ENST00000381867 CCDC150Q8NCX0 1101 aa16.13■□□□□ 0.17
SNPH-201ENST00000381867 TSG101Q99816 390 aa16.13■□□□□ 0.17
SNPH-201ENST00000381867 AIDAQ96BJ3 306 aa16.13■□□□□ 0.17
SNPH-201ENST00000381867 SPATA31E1Q6ZUB1 1445 aa16.13■□□□□ 0.17
SNPH-201ENST00000381867 CCDC171Q6TFL3 1326 aa16.12■□□□□ 0.17
SNPH-201ENST00000381867 PER1O15534 1290 aaPredicted RBP16.12■□□□□ 0.17
SNPH-201ENST00000381867 CCDC175P0C221 793 aa16.12■□□□□ 0.17
SNPH-201ENST00000381867 ZSCAN23Q3MJ62 389 aa16.12■□□□□ 0.17
SNPH-201ENST00000381867 ANKRD13DQ6ZTN6 518 aa16.12■□□□□ 0.17
SNPH-201ENST00000381867 NAA15Q9BXJ9 866 aaKnown RBP16.12■□□□□ 0.17
SNPH-201ENST00000381867 TBC1D32Q96NH3 1257 aa16.12■□□□□ 0.17
SNPH-201ENST00000381867 IQGAP3Q86VI3 1631 aa16.12■□□□□ 0.17
SNPH-201ENST00000381867 ABCA9Q8IUA7 1624 aa16.12■□□□□ 0.17
SNPH-201ENST00000381867 SSR1P43307 286 aaKnown RBP16.12■□□□□ 0.17
SNPH-201ENST00000381867 GPATCH11Q8N954 259 aa16.12■□□□□ 0.17
SNPH-201ENST00000381867 POTEJP0CG39 1038 aa16.11■□□□□ 0.17
SNPH-201ENST00000381867 ZNF76P36508 570 aa16.11■□□□□ 0.17
SNPH-201ENST00000381867 UBE2HP62256 183 aa16.11■□□□□ 0.17
SNPH-201ENST00000381867 LRSAM1Q6UWE0 723 aa16.11■□□□□ 0.17
SNPH-201ENST00000381867 CNNM3Q8NE01 707 aa16.11■□□□□ 0.17
SNPH-201ENST00000381867 STX6O43752 255 aa16.11■□□□□ 0.17
SNPH-201ENST00000381867 FGFR1OPO95684 399 aaKnown RBP16.11■□□□□ 0.17
SNPH-201ENST00000381867 EYA1Q99502 592 aa16.11■□□□□ 0.17
SNPH-201ENST00000381867 HOXB7P09629 217 aa16.11■□□□□ 0.17
SNPH-201ENST00000381867 CCDC196A0A1B0GTZ2 297 aa16.11■□□□□ 0.17
SNPH-201ENST00000381867 ZNF165P49910 485 aa16.11■□□□□ 0.17
SNPH-201ENST00000381867 MTHFSDQ2M296 383 aaKnown RBP16.11■□□□□ 0.17
SNPH-201ENST00000381867 BMP2KLQ5H9B9 411 aa16.11■□□□□ 0.17
SNPH-201ENST00000381867 RBM27Q9P2N5 1060 aaKnown RBP16.11■□□□□ 0.17
SNPH-201ENST00000381867 MAP3K12Q12852 859 aa16.1■□□□□ 0.17
SNPH-201ENST00000381867 TTF1Q15361 905 aaPredicted RBP16.1■□□□□ 0.17
SNPH-201ENST00000381867 ALS2CR12Q96Q35 445 aa16.1■□□□□ 0.17
SNPH-201ENST00000381867 TMX1Q9H3N1 280 aa16.1■□□□□ 0.17
SNPH-201ENST00000381867 GDPD2Q9HCC8 539 aa16.1■□□□□ 0.17
SNPH-201ENST00000381867 BCCIPQ9P287 314 aaKnown RBP eCLIP16.1■□□□□ 0.17
SNPH-201ENST00000381867 CPLX3Q8WVH0 158 aa16.1■□□□□ 0.17
SNPH-201ENST00000381867 KDM6BO15054 1643 aa16.1■□□□□ 0.17
SNPH-201ENST00000381867 FAM83GA6ND36 823 aa16.1■□□□□ 0.17
SNPH-201ENST00000381867 RFC4P35249 363 aa16.1■□□□□ 0.17
SNPH-201ENST00000381867 GOPCQ9HD26 462 aa16.1■□□□□ 0.17
SNPH-201ENST00000381867 ANKIB1Q9P2G1 1089 aa16.1■□□□□ 0.17
SNPH-201ENST00000381867 FAM135BQ49AJ0 1406 aa16.1■□□□□ 0.17
SNPH-201ENST00000381867 LTKP29376 864 aa16.1■□□□□ 0.17
SNPH-201ENST00000381867 C8orf37Q96NL8 207 aa16.1■□□□□ 0.17
SNPH-201ENST00000381867 USP5P45974 858 aa16.09■□□□□ 0.17
SNPH-201ENST00000381867 ST5P78524 1137 aa16.09■□□□□ 0.17
SNPH-201ENST00000381867 IPO4Q8TEX9 1081 aaKnown RBP16.09■□□□□ 0.17
SNPH-201ENST00000381867 WDHD1O75717 1129 aaPredicted RBP16.09■□□□□ 0.17
SNPH-201ENST00000381867 GJB2P29033 226 aa16.09■□□□□ 0.17
SNPH-201ENST00000381867 GIGYF2Q6Y7W6 1299 aaKnown RBP16.09■□□□□ 0.17
SNPH-201ENST00000381867 KSR2Q6VAB6 950 aa16.09■□□□□ 0.17
SNPH-201ENST00000381867 TBC1D9Q6ZT07 1266 aa16.09■□□□□ 0.17
SNPH-201ENST00000381867 PIBF1Q8WXW3 757 aa16.09■□□□□ 0.17
SNPH-201ENST00000381867 ZBTB3Q9H5J0 574 aa16.09■□□□□ 0.17
SNPH-201ENST00000381867 SLAIN2Q9P270 581 aa16.09■□□□□ 0.17
SNPH-201ENST00000381867 GSTTP1A0A1W2PQM5 241 aa16.08■□□□□ 0.17
SNPH-201ENST00000381867 PI4KAP2A4QPH2 592 aa16.08■□□□□ 0.17
SNPH-201ENST00000381867 F6X3S4 739 aa16.08■□□□□ 0.17
SNPH-201ENST00000381867 GUCY1B3Q02153 619 aa16.08■□□□□ 0.17
SNPH-201ENST00000381867 CCDC152Q4G0S7 254 aa16.08■□□□□ 0.17
SNPH-201ENST00000381867 SPECC1Q5M775 1068 aa16.08■□□□□ 0.17
SNPH-201ENST00000381867 DDX46Q7L014 1031 aaKnown RBP16.08■□□□□ 0.17
SNPH-201ENST00000381867 CRACR2BQ8N4Y2 399 aaPredicted RBP16.08■□□□□ 0.17
SNPH-201ENST00000381867 PI4KAP1Q8N8J0 262 aa16.08■□□□□ 0.17
SNPH-201ENST00000381867 ATP7BP35670 1465 aa16.08■□□□□ 0.17
SNPH-201ENST00000381867 ZRANB1Q9UGI0 708 aa16.08■□□□□ 0.17
SNPH-201ENST00000381867 SPECC1LQ69YQ0 1117 aa16.08■□□□□ 0.16
SNPH-201ENST00000381867 NYXQ9GZU5 481 aa16.08■□□□□ 0.16
SNPH-201ENST00000381867 HLTFQ14527 1009 aaKnown RBP eCLIP16.07■□□□□ 0.16
SNPH-201ENST00000381867 BOLA2Q9H3K6 86 aa16.07■□□□□ 0.16
SNPH-201ENST00000381867 RNMTO43148 476 aaKnown RBP16.07■□□□□ 0.16
SNPH-201ENST00000381867 TDRD12Q587J7 1177 aaKnown RBP16.07■□□□□ 0.16
SNPH-201ENST00000381867 NOLC1Q14978 699 aaKnown RBP eCLIP16.07■□□□□ 0.16
SNPH-201ENST00000381867 ZNF219Q9P2Y4 722 aaPredicted RBP16.07■□□□□ 0.16
SNPH-201ENST00000381867 POLR3DP05423 398 aaPredicted RBP16.07■□□□□ 0.16
SNPH-201ENST00000381867 UQCRFS1P1P0C7P4 283 aa16.07■□□□□ 0.16
SNPH-201ENST00000381867 DNA2P51530 1060 aa16.07■□□□□ 0.16
SNPH-201ENST00000381867 GNG11P61952 73 aa16.07■□□□□ 0.16
SNPH-201ENST00000381867 CCDC12Q8WUD4 166 aaPredicted RBP16.07■□□□□ 0.16
SNPH-201ENST00000381867 LDHCP07864 332 aa16.06■□□□□ 0.16
SNPH-201ENST00000381867 PAXIP1Q6ZW49 1069 aaPredicted RBP16.06■□□□□ 0.16
SNPH-201ENST00000381867 TAOK3Q9H2K8 898 aa16.06■□□□□ 0.16
SNPH-201ENST00000381867 IVLP07476 585 aa16.06■□□□□ 0.16
SNPH-201ENST00000381867 XRCC6P12956 609 aaKnown RBP eCLIP16.06■□□□□ 0.16
SNPH-201ENST00000381867 HCLS1P14317 486 aaPredicted RBP16.06■□□□□ 0.16
SNPH-201ENST00000381867 ATP6V1AP38606 617 aa16.06■□□□□ 0.16
SNPH-201ENST00000381867 IL13P35225 146 aa16.06■□□□□ 0.16
SNPH-201ENST00000381867 MNAT1P51948 309 aa16.06■□□□□ 0.16
SNPH-201ENST00000381867 UNC13BO14795 1591 aa16.06■□□□□ 0.16
SNPH-201ENST00000381867 HDAC1Q13547 482 aaPredicted RBP16.06■□□□□ 0.16
SNPH-201ENST00000381867 SPTY2D1Q68D10 685 aaPredicted RBP16.06■□□□□ 0.16
SNPH-201ENST00000381867 MRPL50Q8N5N7 158 aaKnown RBP16.06■□□□□ 0.16
SNPH-201ENST00000381867 EVI5LQ96CN4 794 aa16.06■□□□□ 0.16
SNPH-201ENST00000381867 ECHDC1Q9NTX5 307 aa16.06■□□□□ 0.16
SNPH-201ENST00000381867 BIN1O00499 593 aa16.05■□□□□ 0.16
SNPH-201ENST00000381867 MATR3P43243 847 aaKnown RBP eCLIP16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms