RNA–Protein interactions for RNA: ENST00000381033.4

PDX1-201, Transcript of pancreatic and duodenal homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDX1, Length 2,501 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1-201ENST00000381033 NEUROD6Q96NK8 337 aa20.7■□□□□ 0.9
PDX1-201ENST00000381033 GPTP24298 496 aa20.69■□□□□ 0.9
PDX1-201ENST00000381033 AK2P54819 239 aa20.69■□□□□ 0.9
PDX1-201ENST00000381033 CCDC191Q8NCU4 936 aa20.69■□□□□ 0.9
PDX1-201ENST00000381033 IL17RAQ96F46 866 aa20.69■□□□□ 0.9
PDX1-201ENST00000381033 SEC62Q99442 399 aaKnown RBP20.69■□□□□ 0.9
PDX1-201ENST00000381033 NUCB2P80303 420 aa20.69■□□□□ 0.9
PDX1-201ENST00000381033 CUL4AQ13619 759 aa20.69■□□□□ 0.9
PDX1-201ENST00000381033 CWC22Q9HCG8 908 aaKnown RBP20.69■□□□□ 0.9
PDX1-201ENST00000381033 TJP1Q07157 1748 aa20.68■□□□□ 0.9
PDX1-201ENST00000381033 PRIM1P49642 420 aaKnown RBP20.68■□□□□ 0.9
PDX1-201ENST00000381033 DDX46Q7L014 1031 aaKnown RBP20.68■□□□□ 0.9
PDX1-201ENST00000381033 RUFY2Q8WXA3 655 aa20.68■□□□□ 0.9
PDX1-201ENST00000381033 TTC14Q96N46 770 aa20.68■□□□□ 0.9
PDX1-201ENST00000381033 ITGB4P16144 1822 aa20.68■□□□□ 0.9
PDX1-201ENST00000381033 RBM8AQ9Y5S9 174 aaKnown RBP20.68■□□□□ 0.9
PDX1-201ENST00000381033 CCDC171Q6TFL3 1326 aa20.67■□□□□ 0.9
PDX1-201ENST00000381033 NUTM2BA6NNL0 878 aaPredicted RBP20.67■□□□□ 0.9
PDX1-201ENST00000381033 NUTM2EB1AL46 878 aaPredicted RBP20.67■□□□□ 0.9
PDX1-201ENST00000381033 EXOC5O00471 708 aa20.67■□□□□ 0.9
PDX1-201ENST00000381033 LARGE1O95461 756 aa20.67■□□□□ 0.9
PDX1-201ENST00000381033 TCIRG1Q13488 830 aa20.67■□□□□ 0.9
PDX1-201ENST00000381033 NECTIN1Q15223 517 aa20.67■□□□□ 0.9
PDX1-201ENST00000381033 RUFY3Q7L099 469 aa20.67■□□□□ 0.9
PDX1-201ENST00000381033 NUTM2AQ8IVF1 878 aaPredicted RBP20.67■□□□□ 0.9
PDX1-201ENST00000381033 CCDC129Q6ZRS4 1044 aa20.67■□□□□ 0.9
PDX1-201ENST00000381033 TCEANC2Q96MN5 208 aa20.67■□□□□ 0.9
PDX1-201ENST00000381033 JAKMIP1Q96N16 626 aaKnown RBP20.67■□□□□ 0.9
PDX1-201ENST00000381033 ISCA1Q9BUE6 129 aa20.67■□□□□ 0.9
PDX1-201ENST00000381033 ZBTB1Q9Y2K1 713 aa20.67■□□□□ 0.9
PDX1-201ENST00000381033 DISP2A7MBM2 1401 aa20.67■□□□□ 0.9
PDX1-201ENST00000381033 COL15A1P39059 1388 aa20.66■□□□□ 0.9
PDX1-201ENST00000381033 ATP5JP18859 108 aa20.66■□□□□ 0.9
PDX1-201ENST00000381033 CLEC17AQ6ZS10 378 aa20.66■□□□□ 0.9
PDX1-201ENST00000381033 ACSBG1Q96GR2 724 aa20.66■□□□□ 0.9
PDX1-201ENST00000381033 COL16A1Q07092 1604 aaPredicted RBP20.65■□□□□ 0.9
PDX1-201ENST00000381033 KCNJ4P48050 445 aa20.65■□□□□ 0.9
PDX1-201ENST00000381033 MCM2P49736 904 aa20.65■□□□□ 0.9
PDX1-201ENST00000381033 PANK2Q9BZ23 570 aa20.65■□□□□ 0.9
PDX1-201ENST00000381033 GAS2L3Q86XJ1 694 aa20.65■□□□□ 0.9
PDX1-201ENST00000381033 EPB41L2O43491 1005 aaKnown RBP20.64■□□□□ 0.9
PDX1-201ENST00000381033 PIP4K2BP78356 416 aa20.64■□□□□ 0.9
PDX1-201ENST00000381033 CREB3L3Q68CJ9 461 aa20.64■□□□□ 0.9
PDX1-201ENST00000381033 MAP4K1Q92918 833 aa20.64■□□□□ 0.9
PDX1-201ENST00000381033 TBC1D2BQ9UPU7 963 aa20.64■□□□□ 0.9
PDX1-201ENST00000381033 BCL9O00512 1426 aa20.64■□□□□ 0.89
PDX1-201ENST00000381033 STARD3NLO95772 234 aa20.64■□□□□ 0.89
PDX1-201ENST00000381033 CYP19A1P11511 503 aaPredicted RBP20.64■□□□□ 0.89
PDX1-201ENST00000381033 XRCC6P12956 609 aaKnown RBP eCLIP20.64■□□□□ 0.89
PDX1-201ENST00000381033 PRPF40AO75400 957 aaKnown RBP20.63■□□□□ 0.89
PDX1-201ENST00000381033 LMBRD1Q9NUN5 540 aa20.63■□□□□ 0.89
PDX1-201ENST00000381033 DDX49Q9Y6V7 483 aaKnown RBP20.63■□□□□ 0.89
PDX1-201ENST00000381033 FSD2A1L4K1 749 aa20.62■□□□□ 0.89
PDX1-201ENST00000381033 GOLGA6L3A6NEY3 463 aa20.62■□□□□ 0.89
PDX1-201ENST00000381033 KIF6Q6ZMV9 814 aa20.62■□□□□ 0.89
PDX1-201ENST00000381033 EYA2O00167 538 aa20.62■□□□□ 0.89
PDX1-201ENST00000381033 SLC27A2O14975 620 aa20.62■□□□□ 0.89
PDX1-201ENST00000381033 COL14A1Q05707 1796 aaKnown RBP20.61■□□□□ 0.89
PDX1-201ENST00000381033 GOLIM4O00461 696 aa20.61■□□□□ 0.89
PDX1-201ENST00000381033 NCLP19338 710 aaKnown RBP20.61■□□□□ 0.89
PDX1-201ENST00000381033 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.61■□□□□ 0.89
PDX1-201ENST00000381033 A0A1B0GUL7 405 aa20.6■□□□□ 0.89
PDX1-201ENST00000381033 HAUS7Q99871 368 aa20.6■□□□□ 0.89
PDX1-201ENST00000381033 MED23Q9ULK4 1368 aa20.6■□□□□ 0.89
PDX1-201ENST00000381033 NSFL1CQ9UNZ2 370 aaKnown RBP20.6■□□□□ 0.89
PDX1-201ENST00000381033 ZNF609O15014 1411 aa20.6■□□□□ 0.89
PDX1-201ENST00000381033 MAP3K15Q6ZN16 1313 aa20.6■□□□□ 0.89
PDX1-201ENST00000381033 GOLGA6L22H0YM25 854 aa20.6■□□□□ 0.89
PDX1-201ENST00000381033 TAF5LO75529 589 aa20.6■□□□□ 0.89
PDX1-201ENST00000381033 BRD1O95696 1058 aa20.6■□□□□ 0.89
PDX1-201ENST00000381033 INTS4Q96HW7 963 aaKnown RBP20.6■□□□□ 0.89
PDX1-201ENST00000381033 PDRG1Q9NUG6 133 aa20.6■□□□□ 0.89
PDX1-201ENST00000381033 ADORA1P30542 326 aa20.59■□□□□ 0.89
PDX1-201ENST00000381033 TPRNQ4KMQ1 711 aa20.59■□□□□ 0.89
PDX1-201ENST00000381033 GIGYF2Q6Y7W6 1299 aaKnown RBP20.59■□□□□ 0.89
PDX1-201ENST00000381033 TEX13AQ9BXU3 409 aaPredicted RBP20.59■□□□□ 0.89
PDX1-201ENST00000381033 ZSWIM6Q9HCJ5 1215 aa20.59■□□□□ 0.89
PDX1-201ENST00000381033 IL15P40933 162 aaPredicted RBP20.59■□□□□ 0.89
PDX1-201ENST00000381033 CCDC57Q2TAC2 916 aa20.59■□□□□ 0.89
PDX1-201ENST00000381033 NECAB1Q8N987 351 aa20.59■□□□□ 0.89
PDX1-201ENST00000381033 GDPD2Q9HCC8 539 aa20.59■□□□□ 0.89
PDX1-201ENST00000381033 SNRKQ9NRH2 765 aa20.59■□□□□ 0.89
PDX1-201ENST00000381033 LIMCH1Q9UPQ0 1083 aa20.59■□□□□ 0.89
PDX1-201ENST00000381033 HIP1O00291 1037 aa20.58■□□□□ 0.89
PDX1-201ENST00000381033 ST3GAL1Q11201 340 aa20.58■□□□□ 0.89
PDX1-201ENST00000381033 CCDC83Q8IWF9 413 aa20.58■□□□□ 0.89
PDX1-201ENST00000381033 KCNB2Q92953 911 aa20.58■□□□□ 0.89
PDX1-201ENST00000381033 FAM177BA6PVY3 158 aa20.58■□□□□ 0.88
PDX1-201ENST00000381033 NLRP10Q86W26 655 aa20.58■□□□□ 0.88
PDX1-201ENST00000381033 ZBTB38Q8NAP3 1195 aaPredicted RBP20.57■□□□□ 0.88
PDX1-201ENST00000381033 GPT2Q8TD30 523 aa20.57■□□□□ 0.88
PDX1-201ENST00000381033 RBM27Q9P2N5 1060 aaKnown RBP20.57■□□□□ 0.88
PDX1-201ENST00000381033 CYP46A1Q9Y6A2 500 aa20.57■□□□□ 0.88
PDX1-201ENST00000381033 A0A0G2JLW4 131 aa20.57■□□□□ 0.88
PDX1-201ENST00000381033 ZKSCAN1P17029 563 aaPredicted RBP20.57■□□□□ 0.88
PDX1-201ENST00000381033 DDB1Q16531 1140 aa20.57■□□□□ 0.88
PDX1-201ENST00000381033 ME3Q16798 604 aa20.57■□□□□ 0.88
PDX1-201ENST00000381033 VPS53Q5VIR6 699 aa20.57■□□□□ 0.88
PDX1-201ENST00000381033 MARCH10Q8NA82 808 aaPredicted RBP20.57■□□□□ 0.88
PDX1-201ENST00000381033 GREM2Q9H772 168 aa20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms