RNA–Protein interactions for RNA: ENST00000379237.6

USP6NL-202, Transcript of USP6 N-terminal like, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene USP6NL, Length 4,546 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-202ENST00000379237 CTAGE4Q8IX94 777 aa12.62□□□□□ -0.39
USP6NL-202ENST00000379237 CPLX3Q8WVH0 158 aa12.62□□□□□ -0.39
USP6NL-202ENST00000379237 HOOK1Q9UJC3 728 aaKnown RBP12.62□□□□□ -0.39
USP6NL-202ENST00000379237 EZRP15311 586 aaKnown RBP12.61□□□□□ -0.39
USP6NL-202ENST00000379237 KRT24Q2M2I5 525 aa12.61□□□□□ -0.39
USP6NL-202ENST00000379237 CEP112Q8N8E3 955 aa12.61□□□□□ -0.39
USP6NL-202ENST00000379237 SIRT1Q96EB6 747 aa12.61□□□□□ -0.39
USP6NL-202ENST00000379237 NUP160Q12769 1436 aa12.61□□□□□ -0.39
USP6NL-202ENST00000379237 LARP1Q6PKG0 1096 aaKnown RBP12.61□□□□□ -0.39
USP6NL-202ENST00000379237 LRRN4CLQ8ND94 238 aa12.61□□□□□ -0.39
USP6NL-202ENST00000379237 SCLT1Q96NL6 688 aa12.61□□□□□ -0.39
USP6NL-202ENST00000379237 CC2D2AQ9P2K1 1620 aa12.61□□□□□ -0.39
USP6NL-202ENST00000379237 RABGGTAQ92696 567 aa12.61□□□□□ -0.39
USP6NL-202ENST00000379237 HSPA4P34932 840 aa12.61□□□□□ -0.39
USP6NL-202ENST00000379237 TSR1Q2NL82 804 aaKnown RBP12.61□□□□□ -0.39
USP6NL-202ENST00000379237 FMNL3Q8IVF7 1028 aa12.61□□□□□ -0.39
USP6NL-202ENST00000379237 CCDC148Q8NFR7 591 aa12.61□□□□□ -0.39
USP6NL-202ENST00000379237 FUCA2Q9BTY2 467 aa12.61□□□□□ -0.39
USP6NL-202ENST00000379237 ZBTB12Q9Y330 459 aaPredicted RBP12.61□□□□□ -0.39
USP6NL-202ENST00000379237 MINK1Q8N4C8 1332 aaPredicted RBP12.61□□□□□ -0.39
USP6NL-202ENST00000379237 APOBRQ0VD83 1088 aa12.6□□□□□ -0.39
USP6NL-202ENST00000379237 MICALCLQ6ZW33 695 aa12.6□□□□□ -0.39
USP6NL-202ENST00000379237 CLASRPQ8N2M8 674 aaKnown RBP12.6□□□□□ -0.39
USP6NL-202ENST00000379237 FAM76AQ8TAV0 307 aa12.6□□□□□ -0.39
USP6NL-202ENST00000379237 N4BP2L2Q92802 583 aaPredicted RBP12.6□□□□□ -0.39
USP6NL-202ENST00000379237 CPSF2Q9P2I0 782 aaKnown RBP12.6□□□□□ -0.39
USP6NL-202ENST00000379237 KDM5DQ9BY66 1539 aa12.6□□□□□ -0.39
USP6NL-202ENST00000379237 TXLNAP40222 546 aa12.6□□□□□ -0.39
USP6NL-202ENST00000379237 BRF1Q92994 677 aa12.6□□□□□ -0.39
USP6NL-202ENST00000379237 FSD1Q9BTV5 496 aa12.6□□□□□ -0.39
USP6NL-202ENST00000379237 PHF23Q9BUL5 403 aaPredicted RBP12.6□□□□□ -0.39
USP6NL-202ENST00000379237 CCDC151A5D8V7 595 aa12.6□□□□□ -0.39
USP6NL-202ENST00000379237 EPB41L2O43491 1005 aaKnown RBP12.6□□□□□ -0.39
USP6NL-202ENST00000379237 PPFIA4O75335 1185 aa12.6□□□□□ -0.39
USP6NL-202ENST00000379237 FAM83GA6ND36 823 aa12.59□□□□□ -0.39
USP6NL-202ENST00000379237 WWC2Q6AWC2 1192 aa12.59□□□□□ -0.39
USP6NL-202ENST00000379237 GDAP1L1Q96MZ0 367 aa12.59□□□□□ -0.39
USP6NL-202ENST00000379237 CCZ1BP86790 482 aa12.59□□□□□ -0.39
USP6NL-202ENST00000379237 CCZ1P86791 482 aaPredicted RBP12.59□□□□□ -0.39
USP6NL-202ENST00000379237 NEDD9Q14511 834 aa12.59□□□□□ -0.39
USP6NL-202ENST00000379237 TSPYL4Q9UJ04 414 aa12.59□□□□□ -0.39
USP6NL-202ENST00000379237 PHLPP2Q6ZVD8 1323 aa12.59□□□□□ -0.39
USP6NL-202ENST00000379237 GOLGA6L7A0A1B0GV03 622 aa12.59□□□□□ -0.39
USP6NL-202ENST00000379237 ZEB2O60315 1214 aa12.59□□□□□ -0.39
USP6NL-202ENST00000379237 TBC1D8O95759 1140 aa12.59□□□□□ -0.39
USP6NL-202ENST00000379237 GCKP35557 465 aa12.59□□□□□ -0.39
USP6NL-202ENST00000379237 PSEN1P49768 467 aa12.59□□□□□ -0.39
USP6NL-202ENST00000379237 NDUFAB1O14561 156 aa12.58□□□□□ -0.39
USP6NL-202ENST00000379237 ATP2C2O75185 946 aa12.58□□□□□ -0.39
USP6NL-202ENST00000379237 TADA3O75528 432 aa12.58□□□□□ -0.39
USP6NL-202ENST00000379237 IPO7O95373 1038 aaKnown RBP12.58□□□□□ -0.39
USP6NL-202ENST00000379237 PEX19P40855 299 aa12.58□□□□□ -0.39
USP6NL-202ENST00000379237 ATP2B2Q01814 1243 aa12.58□□□□□ -0.39
USP6NL-202ENST00000379237 FAM71BQ8TC56 605 aa12.58□□□□□ -0.39
USP6NL-202ENST00000379237 TTC41PQ6P2S7 1318 aa12.58□□□□□ -0.4
USP6NL-202ENST00000379237 ABCA10Q8WWZ4 1543 aa12.58□□□□□ -0.4
USP6NL-202ENST00000379237 CORO7P57737 925 aa12.58□□□□□ -0.4
USP6NL-202ENST00000379237 VPS53Q5VIR6 699 aa12.58□□□□□ -0.4
USP6NL-202ENST00000379237 BCAS4Q8TDM0 211 aa12.58□□□□□ -0.4
USP6NL-202ENST00000379237 BAG1Q99933 345 aaPredicted RBP12.58□□□□□ -0.4
USP6NL-202ENST00000379237 ECM2O94769 699 aaPredicted RBP12.58□□□□□ -0.4
USP6NL-202ENST00000379237 ZNF569Q5MCW4 686 aa12.58□□□□□ -0.4
USP6NL-202ENST00000379237 FBXW10Q5XX13 1052 aa12.58□□□□□ -0.4
USP6NL-202ENST00000379237 AP1ARQ63HQ0 302 aa12.58□□□□□ -0.4
USP6NL-202ENST00000379237 E4F1Q66K89 784 aaPredicted RBP12.58□□□□□ -0.4
USP6NL-202ENST00000379237 CCDC9Q9Y3X0 531 aaKnown RBP12.58□□□□□ -0.4
USP6NL-202ENST00000379237 GPATCH8Q9UKJ3 1502 aaKnown RBP12.58□□□□□ -0.4
USP6NL-202ENST00000379237 MMP14P50281 582 aa12.58□□□□□ -0.4
USP6NL-202ENST00000379237 CEP89Q96ST8 783 aa12.58□□□□□ -0.4
USP6NL-202ENST00000379237 ODF2LQ9ULJ1 636 aa12.58□□□□□ -0.4
USP6NL-202ENST00000379237 ABCC4O15439 1325 aa12.58□□□□□ -0.4
USP6NL-202ENST00000379237 CPLX1O14810 134 aa12.57□□□□□ -0.4
USP6NL-202ENST00000379237 FANCCQ00597 558 aa12.57□□□□□ -0.4
USP6NL-202ENST00000379237 FOXR1Q6PIV2 292 aa12.57□□□□□ -0.4
USP6NL-202ENST00000379237 CUL7Q14999 1698 aa12.57□□□□□ -0.4
USP6NL-202ENST00000379237 LARGE1O95461 756 aa12.57□□□□□ -0.4
USP6NL-202ENST00000379237 ME3Q16798 604 aa12.57□□□□□ -0.4
USP6NL-202ENST00000379237 ZSCAN16Q9H4T2 348 aaPredicted RBP12.57□□□□□ -0.4
USP6NL-202ENST00000379237 ARHGEF11O15085 1522 aa12.57□□□□□ -0.4
USP6NL-202ENST00000379237 GOLGA8FQ08AF8 430 aa12.57□□□□□ -0.4
USP6NL-202ENST00000379237 GOLGA8DPQ0D2H9 430 aa12.57□□□□□ -0.4
USP6NL-202ENST00000379237 ANKRD18AQ8IVF6 992 aa12.57□□□□□ -0.4
USP6NL-202ENST00000379237 RASEFQ8IZ41 740 aa12.57□□□□□ -0.4
USP6NL-202ENST00000379237 CABS1Q96KC9 395 aa12.57□□□□□ -0.4
USP6NL-202ENST00000379237 L2HGDHQ9H9P8 463 aa12.57□□□□□ -0.4
USP6NL-202ENST00000379237 PSD3Q9NYI0 1048 aa12.57□□□□□ -0.4
USP6NL-202ENST00000379237 KCNG1Q9UIX4 513 aa12.57□□□□□ -0.4
USP6NL-202ENST00000379237 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.57□□□□□ -0.4
USP6NL-202ENST00000379237 CCDC175P0C221 793 aa12.56□□□□□ -0.4
USP6NL-202ENST00000379237 MCM3P25205 808 aa12.56□□□□□ -0.4
USP6NL-202ENST00000379237 MIS18AQ9NYP9 233 aa12.56□□□□□ -0.4
USP6NL-202ENST00000379237 GRIN2AQ12879 1464 aa12.56□□□□□ -0.4
USP6NL-202ENST00000379237 ADGRF5Q8IZF2 1346 aa12.56□□□□□ -0.4
USP6NL-202ENST00000379237 A0A1B0GVL5 298 aa12.56□□□□□ -0.4
USP6NL-202ENST00000379237 CTAGE9A4FU28 777 aa12.56□□□□□ -0.4
USP6NL-202ENST00000379237 GOLGA6CA6NDK9 693 aa12.56□□□□□ -0.4
USP6NL-202ENST00000379237 GOLGA6DP0CG33 693 aa12.56□□□□□ -0.4
USP6NL-202ENST00000379237 HSP90AB4PQ58FF6 505 aa12.56□□□□□ -0.4
USP6NL-202ENST00000379237 MRPS27Q92552 414 aaKnown RBP12.56□□□□□ -0.4
USP6NL-202ENST00000379237 CCDC114Q96M63 670 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms