RNA–Protein interactions for RNA: ENST00000378778.5

PTPRR-203, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

TSL 1 (best) BASIC

Gene PTPRR, Length 2,632 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-203ENST00000378778 LRMPQ12912 555 aa9.63□□□□□ -0.87
PTPRR-203ENST00000378778 KMT5BQ4FZB7 885 aa9.63□□□□□ -0.87
PTPRR-203ENST00000378778 PRPF40BQ6NWY9 871 aaKnown RBP9.63□□□□□ -0.87
PTPRR-203ENST00000378778 IL1RAPL2Q9NP60 686 aa9.63□□□□□ -0.87
PTPRR-203ENST00000378778 TMEM51Q9NW97 253 aa9.63□□□□□ -0.87
PTPRR-203ENST00000378778 MRC1P22897 1456 aa9.63□□□□□ -0.87
PTPRR-203ENST00000378778 SRGAP3O43295 1099 aa9.63□□□□□ -0.87
PTPRR-203ENST00000378778 ECM2O94769 699 aaPredicted RBP9.63□□□□□ -0.87
PTPRR-203ENST00000378778 CDK11BP21127 795 aaKnown RBP9.63□□□□□ -0.87
PTPRR-203ENST00000378778 CDC37L1Q7L3B6 337 aa9.63□□□□□ -0.87
PTPRR-203ENST00000378778 CEP57L1Q8IYX8 460 aa9.63□□□□□ -0.87
PTPRR-203ENST00000378778 BICD2Q8TD16 824 aa9.63□□□□□ -0.87
PTPRR-203ENST00000378778 ZNF396Q96N95 335 aaPredicted RBP9.63□□□□□ -0.87
PTPRR-203ENST00000378778 RCOR1Q9UKL0 485 aa9.63□□□□□ -0.87
PTPRR-203ENST00000378778 TPCN1Q9ULQ1 816 aa9.63□□□□□ -0.87
PTPRR-203ENST00000378778 RBM8AQ9Y5S9 174 aaKnown RBP9.63□□□□□ -0.87
PTPRR-203ENST00000378778 CYP2C19P33261 490 aa9.62□□□□□ -0.87
PTPRR-203ENST00000378778 CCZ1BP86790 482 aa9.62□□□□□ -0.87
PTPRR-203ENST00000378778 CCZ1P86791 482 aaPredicted RBP9.62□□□□□ -0.87
PTPRR-203ENST00000378778 RESTQ13127 1097 aa9.62□□□□□ -0.87
PTPRR-203ENST00000378778 FCHSD1Q86WN1 690 aa9.62□□□□□ -0.87
PTPRR-203ENST00000378778 OVOS2A0A0G2JMS6 1433 aa9.62□□□□□ -0.87
PTPRR-203ENST00000378778 MED23Q9ULK4 1368 aa9.62□□□□□ -0.87
PTPRR-203ENST00000378778 PHLPP2Q6ZVD8 1323 aa9.62□□□□□ -0.87
PTPRR-203ENST00000378778 BECN2A8MW95 431 aa9.62□□□□□ -0.87
PTPRR-203ENST00000378778 SLC27A2O14975 620 aa9.62□□□□□ -0.87
PTPRR-203ENST00000378778 USPL1Q5W0Q7 1092 aa9.62□□□□□ -0.87
PTPRR-203ENST00000378778 CCDC73Q6ZRK6 1079 aa9.62□□□□□ -0.87
PTPRR-203ENST00000378778 TXLNBQ8N3L3 684 aa9.62□□□□□ -0.87
PTPRR-203ENST00000378778 NOL10Q9BSC4 688 aaKnown RBP9.62□□□□□ -0.87
PTPRR-203ENST00000378778 ZNF215Q9UL58 517 aaPredicted RBP9.62□□□□□ -0.87
PTPRR-203ENST00000378778 CCDC69A6NI79 296 aa9.61□□□□□ -0.87
PTPRR-203ENST00000378778 HMGB1P09429 215 aaKnown RBP9.61□□□□□ -0.87
PTPRR-203ENST00000378778 IFIT2P09913 472 aaKnown RBP9.61□□□□□ -0.87
PTPRR-203ENST00000378778 GTF2E1P29083 439 aaPredicted RBP9.61□□□□□ -0.87
PTPRR-203ENST00000378778 PTH1RQ03431 593 aa9.61□□□□□ -0.87
PTPRR-203ENST00000378778 CCDC93Q567U6 631 aa9.61□□□□□ -0.87
PTPRR-203ENST00000378778 MUM1L1Q5H9M0 696 aa9.61□□□□□ -0.87
PTPRR-203ENST00000378778 DNAJC25Q9H1X3 360 aa9.61□□□□□ -0.87
PTPRR-203ENST00000378778 NRBP1Q9UHY1 535 aa9.61□□□□□ -0.87
PTPRR-203ENST00000378778 SPG7Q9UQ90 795 aa9.61□□□□□ -0.87
PTPRR-203ENST00000378778 METP08581 1390 aa9.61□□□□□ -0.87
PTPRR-203ENST00000378778 LMTK3Q96Q04 1460 aa9.61□□□□□ -0.87
PTPRR-203ENST00000378778 PRR36Q9H6K5 1346 aa9.61□□□□□ -0.87
PTPRR-203ENST00000378778 NPHP4O75161 1426 aaPredicted RBP9.61□□□□□ -0.87
PTPRR-203ENST00000378778 KCNJ4P48050 445 aa9.61□□□□□ -0.87
PTPRR-203ENST00000378778 TUBB4BP68371 445 aa9.61□□□□□ -0.87
PTPRR-203ENST00000378778 CAMK4Q16566 473 aa9.61□□□□□ -0.87
PTPRR-203ENST00000378778 ADCK5Q3MIX3 580 aa9.61□□□□□ -0.87
PTPRR-203ENST00000378778 HSP90AB2PQ58FF8 381 aa9.61□□□□□ -0.87
PTPRR-203ENST00000378778 BEND3Q5T5X7 828 aa9.61□□□□□ -0.87
PTPRR-203ENST00000378778 HDGFL1Q5TGJ6 251 aa9.61□□□□□ -0.87
PTPRR-203ENST00000378778 FBXO38Q6PIJ6 1188 aa9.61□□□□□ -0.87
PTPRR-203ENST00000378778 CKAP2LQ8IYA6 745 aa9.61□□□□□ -0.87
PTPRR-203ENST00000378778 DNAAF4Q8WXU2 420 aa9.61□□□□□ -0.87
PTPRR-203ENST00000378778 GTF3C6Q969F1 213 aa9.61□□□□□ -0.87
PTPRR-203ENST00000378778 NCAPD2Q15021 1401 aa9.6□□□□□ -0.87
PTPRR-203ENST00000378778 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.6□□□□□ -0.87
PTPRR-203ENST00000378778 A0A0U1RQG5 324 aaPredicted RBP9.6□□□□□ -0.87
PTPRR-203ENST00000378778 NR1I2O75469 434 aa9.6□□□□□ -0.87
PTPRR-203ENST00000378778 FAM160A1Q05DH4 1040 aa9.6□□□□□ -0.87
PTPRR-203ENST00000378778 GPS2Q13227 327 aa9.6□□□□□ -0.87
PTPRR-203ENST00000378778 SNW1Q13573 536 aaKnown RBP9.6□□□□□ -0.87
PTPRR-203ENST00000378778 CCDC144BQ3MJ40 725 aa9.6□□□□□ -0.87
PTPRR-203ENST00000378778 CCDC144CPQ8IYA2 1237 aa9.6□□□□□ -0.87
PTPRR-203ENST00000378778 SMARCC2Q8TAQ2 1214 aa9.6□□□□□ -0.87
PTPRR-203ENST00000378778 PGBD1Q96JS3 809 aa9.6□□□□□ -0.87
PTPRR-203ENST00000378778 CEMIPQ8WUJ3 1361 aa9.6□□□□□ -0.87
PTPRR-203ENST00000378778 ACEP12821 1306 aa9.6□□□□□ -0.87
PTPRR-203ENST00000378778 NWD1Q149M9 1564 aa9.6□□□□□ -0.87
PTPRR-203ENST00000378778 A0A1W2PQ27 194 aa9.6□□□□□ -0.87
PTPRR-203ENST00000378778 A0A1W2PQ64 194 aa9.6□□□□□ -0.87
PTPRR-203ENST00000378778 A0A1W2PQD8 194 aa9.6□□□□□ -0.87
PTPRR-203ENST00000378778 GOLGA6L9A6NEM1 432 aa9.6□□□□□ -0.87
PTPRR-203ENST00000378778 KINO60870 393 aaKnown RBP9.6□□□□□ -0.87
PTPRR-203ENST00000378778 RAPGEF3O95398 923 aa9.6□□□□□ -0.87
PTPRR-203ENST00000378778 LMO7Q8WWI1 1683 aa9.59□□□□□ -0.87
PTPRR-203ENST00000378778 ZBTB7CA1YPR0 619 aa9.59□□□□□ -0.87
PTPRR-203ENST00000378778 FAM69CQ0P6D2 419 aa9.59□□□□□ -0.87
PTPRR-203ENST00000378778 OS9Q13438 667 aaPredicted RBP9.59□□□□□ -0.87
PTPRR-203ENST00000378778 JAKMIP3Q5VZ66 844 aa9.59□□□□□ -0.87
PTPRR-203ENST00000378778 LARP1Q6PKG0 1096 aaKnown RBP9.59□□□□□ -0.87
PTPRR-203ENST00000378778 UTYO14607 1347 aa9.59□□□□□ -0.87
PTPRR-203ENST00000378778 TOB2Q14106 344 aaPredicted RBP9.59□□□□□ -0.87
PTPRR-203ENST00000378778 MSL3Q8N5Y2 521 aaKnown RBP9.59□□□□□ -0.87
PTPRR-203ENST00000378778 IPO4Q8TEX9 1081 aaKnown RBP9.59□□□□□ -0.87
PTPRR-203ENST00000378778 PSD3Q9NYI0 1048 aa9.59□□□□□ -0.87
PTPRR-203ENST00000378778 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.59□□□□□ -0.87
PTPRR-203ENST00000378778 U3KPZ7 1027 aaPredicted RBP9.59□□□□□ -0.87
PTPRR-203ENST00000378778 ADCY9O60503 1353 aa9.58□□□□□ -0.88
PTPRR-203ENST00000378778 PLEKHG1Q9ULL1 1385 aa9.58□□□□□ -0.88
PTPRR-203ENST00000378778 H3BQV1 296 aa9.58□□□□□ -0.88
PTPRR-203ENST00000378778 ELF2Q15723 593 aa9.58□□□□□ -0.88
PTPRR-203ENST00000378778 IFFO2Q5TF58 517 aa9.58□□□□□ -0.88
PTPRR-203ENST00000378778 MIS18AQ9NYP9 233 aa9.58□□□□□ -0.88
PTPRR-203ENST00000378778 KIF13AQ9H1H9 1805 aa9.58□□□□□ -0.88
PTPRR-203ENST00000378778 ABCC6O95255 1503 aa9.58□□□□□ -0.88
PTPRR-203ENST00000378778 EFCAB8A8MWE9 144 aa9.58□□□□□ -0.88
PTPRR-203ENST00000378778 CBFA2T2O43439 604 aa9.58□□□□□ -0.88
PTPRR-203ENST00000378778 ZRANB2O95218 330 aaKnown RBP eCLIP9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms