RNA–Protein interactions for RNA: ENST00000377298.8

CLSTN1-202, Transcript of calsyntenin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN1, Length 5,221 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-202ENST00000377298 ZBTB40Q9NUA8 1239 aa20.73■□□□□ 0.91
CLSTN1-202ENST00000377298 KIF20AO95235 890 aa20.72■□□□□ 0.91
CLSTN1-202ENST00000377298 PAG1Q9NWQ8 432 aa20.72■□□□□ 0.91
CLSTN1-202ENST00000377298 RBM8AQ9Y5S9 174 aaKnown RBP20.72■□□□□ 0.91
CLSTN1-202ENST00000377298 DDX19AQ9NUU7 478 aaKnown RBP20.72■□□□□ 0.91
CLSTN1-202ENST00000377298 TSG101Q99816 390 aa20.72■□□□□ 0.91
CLSTN1-202ENST00000377298 BRF1Q92994 677 aa20.71■□□□□ 0.91
CLSTN1-202ENST00000377298 PPP4R3AQ6IN85 833 aa20.71■□□□□ 0.91
CLSTN1-202ENST00000377298 ANKRD2Q9GZV1 360 aa20.71■□□□□ 0.91
CLSTN1-202ENST00000377298 IQSEC3Q9UPP2 1182 aaPredicted RBP20.71■□□□□ 0.91
CLSTN1-202ENST00000377298 SLAIN2Q9P270 581 aa20.71■□□□□ 0.91
CLSTN1-202ENST00000377298 STX8Q9UNK0 236 aa20.71■□□□□ 0.91
CLSTN1-202ENST00000377298 PARP3Q9Y6F1 533 aa20.71■□□□□ 0.91
CLSTN1-202ENST00000377298 OGFOD1Q8N543 542 aa20.71■□□□□ 0.91
CLSTN1-202ENST00000377298 TNPO1Q92973 898 aaKnown RBP20.71■□□□□ 0.91
CLSTN1-202ENST00000377298 CCDC144CPQ8IYA2 1237 aa20.7■□□□□ 0.9
CLSTN1-202ENST00000377298 PLBD2Q8NHP8 589 aa20.7■□□□□ 0.9
CLSTN1-202ENST00000377298 PYM1Q9BRP8 204 aaKnown RBP20.7■□□□□ 0.9
CLSTN1-202ENST00000377298 SLC26A6Q9BXS9 759 aa20.7■□□□□ 0.9
CLSTN1-202ENST00000377298 TCP11L1Q9NUJ3 509 aa20.7■□□□□ 0.9
CLSTN1-202ENST00000377298 KLF18A0A0U1RQI7 1052 aa20.7■□□□□ 0.9
CLSTN1-202ENST00000377298 CNNM3Q8NE01 707 aa20.7■□□□□ 0.9
CLSTN1-202ENST00000377298 ZC3H12CQ9C0D7 883 aaKnown RBP20.7■□□□□ 0.9
CLSTN1-202ENST00000377298 FGFR1OPO95684 399 aaKnown RBP20.7■□□□□ 0.9
CLSTN1-202ENST00000377298 TRAF1Q13077 416 aa20.7■□□□□ 0.9
CLSTN1-202ENST00000377298 ZNF397Q8NF99 534 aaPredicted RBP20.7■□□□□ 0.9
CLSTN1-202ENST00000377298 RLBP1P12271 317 aa20.7■□□□□ 0.9
CLSTN1-202ENST00000377298 GNAT2P19087 354 aa20.7■□□□□ 0.9
CLSTN1-202ENST00000377298 PTPRTO14522 1441 aa20.69■□□□□ 0.9
CLSTN1-202ENST00000377298 ZBTB43O43298 467 aa20.69■□□□□ 0.9
CLSTN1-202ENST00000377298 SETQ01105 290 aaPredicted RBP20.69■□□□□ 0.9
CLSTN1-202ENST00000377298 PARP10Q53GL7 1025 aa20.69■□□□□ 0.9
CLSTN1-202ENST00000377298 FSIP1Q8NA03 581 aa20.69■□□□□ 0.9
CLSTN1-202ENST00000377298 ZSCAN16Q9H4T2 348 aaPredicted RBP20.69■□□□□ 0.9
CLSTN1-202ENST00000377298 TSPY3P0CV98 308 aa20.69■□□□□ 0.9
CLSTN1-202ENST00000377298 TSPY8P0CW00 308 aa20.69■□□□□ 0.9
CLSTN1-202ENST00000377298 CCDC181Q5TID7 509 aa20.69■□□□□ 0.9
CLSTN1-202ENST00000377298 CHL1O00533 1208 aa20.69■□□□□ 0.9
CLSTN1-202ENST00000377298 VAT1LQ9HCJ6 419 aa20.69■□□□□ 0.9
CLSTN1-202ENST00000377298 EPB41L2O43491 1005 aaKnown RBP20.68■□□□□ 0.9
CLSTN1-202ENST00000377298 LTKP29376 864 aa20.68■□□□□ 0.9
CLSTN1-202ENST00000377298 GNAQP50148 359 aa20.68■□□□□ 0.9
CLSTN1-202ENST00000377298 TRAPPC3LQ5T215 181 aa20.68■□□□□ 0.9
CLSTN1-202ENST00000377298 YEATS2Q9ULM3 1422 aa20.68■□□□□ 0.9
CLSTN1-202ENST00000377298 ABCA8O94911 1581 aa20.68■□□□□ 0.9
CLSTN1-202ENST00000377298 IBSPP21815 317 aaPredicted RBP20.68■□□□□ 0.9
CLSTN1-202ENST00000377298 MAGI3Q5TCQ9 1506 aa20.68■□□□□ 0.9
CLSTN1-202ENST00000377298 ERLIN2O94905 339 aa20.67■□□□□ 0.9
CLSTN1-202ENST00000377298 PLCG2P16885 1265 aa20.67■□□□□ 0.9
CLSTN1-202ENST00000377298 FKBP15Q5T1M5 1219 aa20.67■□□□□ 0.9
CLSTN1-202ENST00000377298 NBPF14Q5TI25 921 aa20.67■□□□□ 0.9
CLSTN1-202ENST00000377298 SMC5Q8IY18 1101 aa20.67■□□□□ 0.9
CLSTN1-202ENST00000377298 CALML4Q96GE6 196 aa20.67■□□□□ 0.9
CLSTN1-202ENST00000377298 SEPT11Q9NVA2 429 aaKnown RBP20.67■□□□□ 0.9
CLSTN1-202ENST00000377298 RNF113AO15541 343 aaKnown RBP20.67■□□□□ 0.9
CLSTN1-202ENST00000377298 TMX3Q96JJ7 454 aa20.67■□□□□ 0.9
CLSTN1-202ENST00000377298 SLC52A2Q9HAB3 445 aa20.67■□□□□ 0.9
CLSTN1-202ENST00000377298 TNNQ9UQP3 1299 aa20.67■□□□□ 0.9
CLSTN1-202ENST00000377298 GNPATO15228 680 aa20.67■□□□□ 0.9
CLSTN1-202ENST00000377298 RBM10P98175 930 aaKnown RBP20.67■□□□□ 0.9
CLSTN1-202ENST00000377298 AMPD3Q01432 767 aa20.67■□□□□ 0.9
CLSTN1-202ENST00000377298 IFIT1BQ5T764 474 aaKnown RBP20.67■□□□□ 0.9
CLSTN1-202ENST00000377298 KLHL10Q6JEL2 608 aa20.67■□□□□ 0.9
CLSTN1-202ENST00000377298 MBD5Q9P267 1494 aa20.67■□□□□ 0.9
CLSTN1-202ENST00000377298 NBPF7P0C2Y1 421 aaPredicted RBP20.67■□□□□ 0.9
CLSTN1-202ENST00000377298 CHMP4BP1P59074 171 aa20.67■□□□□ 0.9
CLSTN1-202ENST00000377298 METTL22Q9BUU2 404 aaPredicted RBP20.67■□□□□ 0.9
CLSTN1-202ENST00000377298 BICC1Q9H694 974 aaKnown RBP20.67■□□□□ 0.9
CLSTN1-202ENST00000377298 NSFL1CQ9UNZ2 370 aaKnown RBP20.67■□□□□ 0.9
CLSTN1-202ENST00000377298 C16orf71Q8IYS4 520 aaPredicted RBP20.66■□□□□ 0.9
CLSTN1-202ENST00000377298 TFIP11Q9UBB9 837 aaKnown RBP20.66■□□□□ 0.9
CLSTN1-202ENST00000377298 MAGEB6P1A0A0J9YX57 407 aa20.66■□□□□ 0.9
CLSTN1-202ENST00000377298 DESP17661 470 aa20.66■□□□□ 0.9
CLSTN1-202ENST00000377298 TFCP2Q12800 502 aa20.66■□□□□ 0.9
CLSTN1-202ENST00000377298 MPNDQ8N594 471 aa20.66■□□□□ 0.9
CLSTN1-202ENST00000377298 CCDC112Q8NEF3 446 aa20.66■□□□□ 0.9
CLSTN1-202ENST00000377298 NMIQ13287 307 aaPredicted RBP20.66■□□□□ 0.9
CLSTN1-202ENST00000377298 EYA3Q99504 573 aa20.66■□□□□ 0.9
CLSTN1-202ENST00000377298 MYO5CQ9NQX4 1742 aa20.66■□□□□ 0.9
CLSTN1-202ENST00000377298 SCLT1Q96NL6 688 aa20.65■□□□□ 0.9
CLSTN1-202ENST00000377298 RBM25P49756 843 aaKnown RBP20.65■□□□□ 0.9
CLSTN1-202ENST00000377298 CCDC191Q8NCU4 936 aa20.65■□□□□ 0.9
CLSTN1-202ENST00000377298 PLXNC1O60486 1568 aa20.65■□□□□ 0.9
CLSTN1-202ENST00000377298 TRIM21P19474 475 aaKnown RBP20.65■□□□□ 0.9
CLSTN1-202ENST00000377298 POLD1P28340 1107 aa20.65■□□□□ 0.9
CLSTN1-202ENST00000377298 ADGBQ8N7X0 1667 aa20.65■□□□□ 0.9
CLSTN1-202ENST00000377298 UBA7P41226 1012 aa20.65■□□□□ 0.9
CLSTN1-202ENST00000377298 SLC4A8Q2Y0W8 1093 aa20.65■□□□□ 0.9
CLSTN1-202ENST00000377298 SH3TC1Q8TE82 1336 aa20.64■□□□□ 0.9
CLSTN1-202ENST00000377298 BMP15O95972 392 aa20.64■□□□□ 0.89
CLSTN1-202ENST00000377298 POTEJP0CG39 1038 aa20.64■□□□□ 0.89
CLSTN1-202ENST00000377298 SFPQP23246 707 aaKnown RBP eCLIP20.64■□□□□ 0.89
CLSTN1-202ENST00000377298 RTN1Q16799 776 aa20.64■□□□□ 0.89
CLSTN1-202ENST00000377298 KANK3Q6NY19 840 aa20.64■□□□□ 0.89
CLSTN1-202ENST00000377298 CCNL1Q9UK58 526 aaPredicted RBP20.64■□□□□ 0.89
CLSTN1-202ENST00000377298 RAB11FIP4Q86YS3 637 aa20.64■□□□□ 0.89
CLSTN1-202ENST00000377298 RAD50Q92878 1312 aa20.64■□□□□ 0.89
CLSTN1-202ENST00000377298 F8W031 263 aaPredicted RBP20.64■□□□□ 0.89
CLSTN1-202ENST00000377298 CCDC148Q8NFR7 591 aa20.64■□□□□ 0.89
CLSTN1-202ENST00000377298 HELBQ8NG08 1087 aaPredicted RBP20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms