RNA–Protein interactions for RNA: ENST00000376656.8

TRIM39-201, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 2 BASIC

Gene TRIM39, Length 3,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-201ENST00000376656 TRMT1Q9NXH9 659 aaKnown RBP19.45■□□□□ 0.7
TRIM39-201ENST00000376656 C9orf78Q9NZ63 289 aaPredicted RBP19.45■□□□□ 0.7
TRIM39-201ENST00000376656 ZNF589Q86UQ0 364 aaPredicted RBP19.44■□□□□ 0.7
TRIM39-201ENST00000376656 ERC1Q8IUD2 1116 aa19.44■□□□□ 0.7
TRIM39-201ENST00000376656 BOLA2Q9H3K6 86 aa19.44■□□□□ 0.7
TRIM39-201ENST00000376656 LGR6Q9HBX8 967 aa19.44■□□□□ 0.7
TRIM39-201ENST00000376656 SNRKQ9NRH2 765 aa19.44■□□□□ 0.7
TRIM39-201ENST00000376656 PTPRUQ92729 1446 aa19.44■□□□□ 0.7
TRIM39-201ENST00000376656 HIP1O00291 1037 aa19.44■□□□□ 0.7
TRIM39-201ENST00000376656 SASH1O94885 1247 aa19.44■□□□□ 0.7
TRIM39-201ENST00000376656 AEBP2Q6ZN18 517 aaPredicted RBP19.44■□□□□ 0.7
TRIM39-201ENST00000376656 MRFAP1L1Q96HT8 127 aa19.44■□□□□ 0.7
TRIM39-201ENST00000376656 FSD1Q9BTV5 496 aa19.44■□□□□ 0.7
TRIM39-201ENST00000376656 ALDH8A1Q9H2A2 487 aaPredicted RBP19.44■□□□□ 0.7
TRIM39-201ENST00000376656 FILIP1Q7Z7B0 1213 aa19.43■□□□□ 0.7
TRIM39-201ENST00000376656 PIK3C2AO00443 1686 aa19.43■□□□□ 0.7
TRIM39-201ENST00000376656 KRT222Q8N1A0 295 aa19.43■□□□□ 0.7
TRIM39-201ENST00000376656 CCDC69A6NI79 296 aa19.43■□□□□ 0.7
TRIM39-201ENST00000376656 CAVIN2O95810 425 aa19.43■□□□□ 0.7
TRIM39-201ENST00000376656 TERF2Q15554 542 aa19.43■□□□□ 0.7
TRIM39-201ENST00000376656 GIGYF1O75420 1035 aaPredicted RBP19.42■□□□□ 0.7
TRIM39-201ENST00000376656 CCZ1BP86790 482 aa19.42■□□□□ 0.7
TRIM39-201ENST00000376656 CCZ1P86791 482 aaPredicted RBP19.42■□□□□ 0.7
TRIM39-201ENST00000376656 ELF2Q15723 593 aa19.42■□□□□ 0.7
TRIM39-201ENST00000376656 CWF19L2Q2TBE0 894 aaKnown RBP19.42■□□□□ 0.7
TRIM39-201ENST00000376656 GTF3C6Q969F1 213 aa19.42■□□□□ 0.7
TRIM39-201ENST00000376656 MAP3K2Q9Y2U5 619 aa19.42■□□□□ 0.7
TRIM39-201ENST00000376656 MED23Q9ULK4 1368 aa19.42■□□□□ 0.7
TRIM39-201ENST00000376656 FBXO38Q6PIJ6 1188 aa19.42■□□□□ 0.7
TRIM39-201ENST00000376656 NEMFO60524 1076 aa19.41■□□□□ 0.7
TRIM39-201ENST00000376656 TAF3Q5VWG9 929 aa19.41■□□□□ 0.7
TRIM39-201ENST00000376656 FTOQ9C0B1 505 aaKnown RBP eCLIP19.41■□□□□ 0.7
TRIM39-201ENST00000376656 CEMIPQ8WUJ3 1361 aa19.41■□□□□ 0.7
TRIM39-201ENST00000376656 ERBB3P21860 1342 aa19.41■□□□□ 0.7
TRIM39-201ENST00000376656 H3BQV1 296 aa19.41■□□□□ 0.7
TRIM39-201ENST00000376656 STX1AQ16623 288 aa19.41■□□□□ 0.7
TRIM39-201ENST00000376656 IFFO2Q5TF58 517 aa19.41■□□□□ 0.7
TRIM39-201ENST00000376656 TMEM2Q9UHN6 1383 aa19.4■□□□□ 0.7
TRIM39-201ENST00000376656 GOLPH3LQ9H4A5 285 aa19.4■□□□□ 0.7
TRIM39-201ENST00000376656 RGPD8O14715 1765 aaPredicted RBP19.4■□□□□ 0.7
TRIM39-201ENST00000376656 FOSBP53539 338 aa19.4■□□□□ 0.7
TRIM39-201ENST00000376656 CCAR1Q8IX12 1150 aaKnown RBP19.4■□□□□ 0.7
TRIM39-201ENST00000376656 DHX40Q8IX18 779 aaKnown RBP19.4■□□□□ 0.7
TRIM39-201ENST00000376656 CCAR2Q8N163 923 aaKnown RBP19.4■□□□□ 0.7
TRIM39-201ENST00000376656 EDC3Q96F86 508 aaKnown RBP19.4■□□□□ 0.7
TRIM39-201ENST00000376656 ERO1AQ96HE7 468 aa19.4■□□□□ 0.7
TRIM39-201ENST00000376656 BECN2A8MW95 431 aa19.39■□□□□ 0.69
TRIM39-201ENST00000376656 HOXB7P09629 217 aa19.39■□□□□ 0.69
TRIM39-201ENST00000376656 CFAP45Q9UL16 551 aa19.39■□□□□ 0.69
TRIM39-201ENST00000376656 PROSER3Q2NL68 480 aa19.39■□□□□ 0.69
TRIM39-201ENST00000376656 SIL1Q9H173 461 aa19.39■□□□□ 0.69
TRIM39-201ENST00000376656 FAM53CQ9NYF3 392 aa19.39■□□□□ 0.69
TRIM39-201ENST00000376656 TAF5LO75529 589 aa19.38■□□□□ 0.69
TRIM39-201ENST00000376656 ADD1P35611 737 aaKnown RBP19.38■□□□□ 0.69
TRIM39-201ENST00000376656 G3BP1Q13283 466 aaKnown RBP eCLIP19.38■□□□□ 0.69
TRIM39-201ENST00000376656 TSGA10IPQ3SY00 556 aa19.38■□□□□ 0.69
TRIM39-201ENST00000376656 KAZALD1Q96I82 304 aa19.38■□□□□ 0.69
TRIM39-201ENST00000376656 SUCLG2Q96I99 432 aa19.38■□□□□ 0.69
TRIM39-201ENST00000376656 SLC26A8Q96RN1 970 aa19.38■□□□□ 0.69
TRIM39-201ENST00000376656 ST7Q9NRC1 585 aa19.38■□□□□ 0.69
TRIM39-201ENST00000376656 HMG20BQ9P0W2 317 aa19.38■□□□□ 0.69
TRIM39-201ENST00000376656 NPHP1O15259 732 aa19.38■□□□□ 0.69
TRIM39-201ENST00000376656 DIP2BQ9P265 1576 aa19.38■□□□□ 0.69
TRIM39-201ENST00000376656 HSP90B1P14625 803 aaKnown RBP19.38■□□□□ 0.69
TRIM39-201ENST00000376656 Q6ZUG5 572 aa19.38■□□□□ 0.69
TRIM39-201ENST00000376656 ERCC4Q92889 916 aaPredicted RBP19.38■□□□□ 0.69
TRIM39-201ENST00000376656 ZSCAN16Q9H4T2 348 aaPredicted RBP19.38■□□□□ 0.69
TRIM39-201ENST00000376656 JCADQ9P266 1359 aa19.38■□□□□ 0.69
TRIM39-201ENST00000376656 ALDH1L1O75891 902 aa19.37■□□□□ 0.69
TRIM39-201ENST00000376656 FBXW7Q969H0 707 aa19.37■□□□□ 0.69
TRIM39-201ENST00000376656 BICC1Q9H694 974 aaKnown RBP19.37■□□□□ 0.69
TRIM39-201ENST00000376656 COL15A1P39059 1388 aa19.37■□□□□ 0.69
TRIM39-201ENST00000376656 SLU7O95391 586 aaKnown RBP19.36■□□□□ 0.69
TRIM39-201ENST00000376656 SNW1Q13573 536 aaKnown RBP19.36■□□□□ 0.69
TRIM39-201ENST00000376656 NEK1Q96PY6 1258 aa19.36■□□□□ 0.69
TRIM39-201ENST00000376656 LRRC2Q9BYS8 371 aa19.36■□□□□ 0.69
TRIM39-201ENST00000376656 CTAGE5O15320 804 aa19.36■□□□□ 0.69
TRIM39-201ENST00000376656 LTKP29376 864 aa19.36■□□□□ 0.69
TRIM39-201ENST00000376656 KDM3BQ7LBC6 1761 aa19.36■□□□□ 0.69
TRIM39-201ENST00000376656 KLHDC4Q8TBB5 520 aa19.36■□□□□ 0.69
TRIM39-201ENST00000376656 ZNF446Q9NWS9 450 aa19.36■□□□□ 0.69
TRIM39-201ENST00000376656 DBF4Q9UBU7 674 aaPredicted RBP19.36■□□□□ 0.69
TRIM39-201ENST00000376656 AOPEPQ8N6M6 819 aa19.36■□□□□ 0.69
TRIM39-201ENST00000376656 MED1Q15648 1581 aaPredicted RBP19.35■□□□□ 0.69
TRIM39-201ENST00000376656 SCRN1Q12765 414 aa19.35■□□□□ 0.69
TRIM39-201ENST00000376656 BTBD11A6QL63 1104 aa19.35■□□□□ 0.69
TRIM39-201ENST00000376656 ZBTB22O15209 634 aa19.35■□□□□ 0.69
TRIM39-201ENST00000376656 USPL1Q5W0Q7 1092 aa19.35■□□□□ 0.69
TRIM39-201ENST00000376656 KSR2Q6VAB6 950 aa19.35■□□□□ 0.69
TRIM39-201ENST00000376656 RCOR1Q9UKL0 485 aa19.35■□□□□ 0.69
TRIM39-201ENST00000376656 CHGBP05060 677 aa19.35■□□□□ 0.69
TRIM39-201ENST00000376656 ESF1Q9H501 851 aaKnown RBP19.35■□□□□ 0.69
TRIM39-201ENST00000376656 CCDC73Q6ZRK6 1079 aa19.34■□□□□ 0.69
TRIM39-201ENST00000376656 SYTL4Q96C24 671 aaPredicted RBP19.34■□□□□ 0.69
TRIM39-201ENST00000376656 KRT32Q14532 448 aa19.34■□□□□ 0.69
TRIM39-201ENST00000376656 SLFNL1Q499Z3 407 aa19.34■□□□□ 0.69
TRIM39-201ENST00000376656 NBPF11Q86T75 865 aa19.34■□□□□ 0.69
TRIM39-201ENST00000376656 USP28Q96RU2 1077 aa19.34■□□□□ 0.69
TRIM39-201ENST00000376656 ANO10Q9NW15 660 aa19.34■□□□□ 0.69
TRIM39-201ENST00000376656 TNRQ92752 1358 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms