RNA–Protein interactions for RNA: ENST00000375820.8

COL4A1-201, Transcript of collagen type IV alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL4A1, Length 6,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-201ENST00000375820 CAPZA3Q96KX2 299 aa15.69■□□□□ 0.1
COL4A1-201ENST00000375820 PHACTR2O75167 634 aa15.69■□□□□ 0.1
COL4A1-201ENST00000375820 RFC4P35249 363 aa15.69■□□□□ 0.1
COL4A1-201ENST00000375820 CEP112Q8N8E3 955 aa15.69■□□□□ 0.1
COL4A1-201ENST00000375820 PPM1EQ8WY54 764 aa15.69■□□□□ 0.1
COL4A1-201ENST00000375820 PLIN2Q99541 437 aa15.69■□□□□ 0.1
COL4A1-201ENST00000375820 CALM1P0DP23 149 aa15.69■□□□□ 0.1
COL4A1-201ENST00000375820 CALM2P0DP24 149 aa15.69■□□□□ 0.1
COL4A1-201ENST00000375820 CALM3P0DP25 149 aa15.69■□□□□ 0.1
COL4A1-201ENST00000375820 ALDH1L2Q3SY69 923 aa15.69■□□□□ 0.1
COL4A1-201ENST00000375820 CCDC102BQ68D86 513 aa15.69■□□□□ 0.1
COL4A1-201ENST00000375820 SYKP43405 635 aa15.68■□□□□ 0.1
COL4A1-201ENST00000375820 DDX23Q9BUQ8 820 aaKnown RBP15.68■□□□□ 0.1
COL4A1-201ENST00000375820 ERICH3Q5RHP9 1530 aa15.68■□□□□ 0.1
COL4A1-201ENST00000375820 SLC4A4Q9Y6R1 1079 aa15.68■□□□□ 0.1
COL4A1-201ENST00000375820 HLA-DOAP06340 250 aa15.68■□□□□ 0.1
COL4A1-201ENST00000375820 ACTN2P35609 894 aa15.68■□□□□ 0.1
COL4A1-201ENST00000375820 AMOTQ4VCS5 1084 aa15.68■□□□□ 0.1
COL4A1-201ENST00000375820 ARAP1Q96P48 1450 aa15.68■□□□□ 0.1
COL4A1-201ENST00000375820 IFIT1BQ5T764 474 aaKnown RBP15.68■□□□□ 0.1
COL4A1-201ENST00000375820 FAM114A1Q8IWE2 563 aa15.68■□□□□ 0.1
COL4A1-201ENST00000375820 CCDC63Q8NA47 563 aa15.68■□□□□ 0.1
COL4A1-201ENST00000375820 WTAPQ15007 396 aa15.67■□□□□ 0.1
COL4A1-201ENST00000375820 CYP7A1P22680 504 aa15.67■□□□□ 0.1
COL4A1-201ENST00000375820 GSDMDP57764 484 aa15.67■□□□□ 0.1
COL4A1-201ENST00000375820 BAG3O95817 575 aa15.67■□□□□ 0.1
COL4A1-201ENST00000375820 MCM6Q14566 821 aa15.67■□□□□ 0.1
COL4A1-201ENST00000375820 RBM26Q5T8P6 1007 aaKnown RBP15.67■□□□□ 0.1
COL4A1-201ENST00000375820 FBF1Q8TES7 1133 aa15.67■□□□□ 0.1
COL4A1-201ENST00000375820 MBIPQ9NS73 344 aa15.67■□□□□ 0.1
COL4A1-201ENST00000375820 EEF2P13639 858 aaKnown RBP15.67■□□□□ 0.1
COL4A1-201ENST00000375820 SP4Q02446 784 aa15.67■□□□□ 0.1
COL4A1-201ENST00000375820 GSTA5Q7RTV2 222 aa15.67■□□□□ 0.1
COL4A1-201ENST00000375820 GIGYF2Q6Y7W6 1299 aaKnown RBP15.67■□□□□ 0.1
COL4A1-201ENST00000375820 TBC1D5Q92609 795 aa15.67■□□□□ 0.1
COL4A1-201ENST00000375820 ALG1Q9BT22 464 aa15.67■□□□□ 0.1
COL4A1-201ENST00000375820 PLEKHH1Q9ULM0 1364 aa15.66■□□□□ 0.1
COL4A1-201ENST00000375820 PPARDQ03181 441 aa15.66■□□□□ 0.1
COL4A1-201ENST00000375820 TTF1Q15361 905 aaPredicted RBP15.66■□□□□ 0.1
COL4A1-201ENST00000375820 FBXO31Q5XUX0 539 aaPredicted RBP15.66■□□□□ 0.1
COL4A1-201ENST00000375820 SSX2IPQ9Y2D8 614 aa15.66■□□□□ 0.1
COL4A1-201ENST00000375820 PHF8Q9UPP1 1060 aa15.66■□□□□ 0.1
COL4A1-201ENST00000375820 DNAJC21Q5F1R6 531 aaKnown RBP15.66■□□□□ 0.1
COL4A1-201ENST00000375820 CDC5LQ99459 802 aaKnown RBP15.66■□□□□ 0.1
COL4A1-201ENST00000375820 AOPEPQ8N6M6 819 aa15.66■□□□□ 0.1
COL4A1-201ENST00000375820 DNAI1Q9UI46 699 aa15.66■□□□□ 0.1
COL4A1-201ENST00000375820 AMOTL2Q9Y2J4 779 aa15.66■□□□□ 0.1
COL4A1-201ENST00000375820 SLC39A6Q13433 755 aa15.66■□□□□ 0.1
COL4A1-201ENST00000375820 NBPF6Q5VWK0 638 aa15.66■□□□□ 0.1
COL4A1-201ENST00000375820 NBPF5PQ86XG9 351 aaPredicted RBP15.66■□□□□ 0.1
COL4A1-201ENST00000375820 NBPF4Q96M43 638 aa15.66■□□□□ 0.1
COL4A1-201ENST00000375820 SPAG5Q96R06 1193 aa15.66■□□□□ 0.1
COL4A1-201ENST00000375820 RPGRIP1LQ68CZ1 1315 aa15.66■□□□□ 0.1
COL4A1-201ENST00000375820 CCDC160A6NGH7 325 aa15.65■□□□□ 0.1
COL4A1-201ENST00000375820 SPECC1LQ69YQ0 1117 aa15.65■□□□□ 0.1
COL4A1-201ENST00000375820 CCDC50Q8IVM0 306 aa15.65■□□□□ 0.1
COL4A1-201ENST00000375820 DHX58Q96C10 678 aa15.65■□□□□ 0.1
COL4A1-201ENST00000375820 SELENOSQ9BQE4 189 aa15.65■□□□□ 0.1
COL4A1-201ENST00000375820 RXRAP19793 462 aa15.65■□□□□ 0.1
COL4A1-201ENST00000375820 CHPF2Q9P2E5 772 aa15.65■□□□□ 0.1
COL4A1-201ENST00000375820 STXBP4Q6ZWJ1 553 aa15.65■□□□□ 0.1
COL4A1-201ENST00000375820 PDIA4P13667 645 aaKnown RBP15.65■□□□□ 0.1
COL4A1-201ENST00000375820 TTC22Q5TAA0 569 aa15.65■□□□□ 0.1
COL4A1-201ENST00000375820 RSPH14Q9UHP6 348 aa15.65■□□□□ 0.1
COL4A1-201ENST00000375820 STX17P56962 302 aa15.65■□□□□ 0.1
COL4A1-201ENST00000375820 Q6ZUG5 572 aa15.65■□□□□ 0.1
COL4A1-201ENST00000375820 CRNKL1Q9BZJ0 848 aaKnown RBP15.65■□□□□ 0.1
COL4A1-201ENST00000375820 MAP3K9P80192 1104 aa15.64■□□□□ 0.09
COL4A1-201ENST00000375820 TMX3Q96JJ7 454 aa15.64■□□□□ 0.09
COL4A1-201ENST00000375820 DNAJC25Q9H1X3 360 aa15.64■□□□□ 0.09
COL4A1-201ENST00000375820 PSMC4P43686 418 aa15.64■□□□□ 0.09
COL4A1-201ENST00000375820 DAPK1P53355 1430 aa15.64■□□□□ 0.09
COL4A1-201ENST00000375820 FAM170AA1A519 330 aa15.64■□□□□ 0.09
COL4A1-201ENST00000375820 UBE2HP62256 183 aa15.64■□□□□ 0.09
COL4A1-201ENST00000375820 C16orf71Q8IYS4 520 aaPredicted RBP15.64■□□□□ 0.09
COL4A1-201ENST00000375820 TTC21AQ8NDW8 1320 aa15.64■□□□□ 0.09
COL4A1-201ENST00000375820 MCM5P33992 734 aa15.64■□□□□ 0.09
COL4A1-201ENST00000375820 KARSQ15046 597 aaKnown RBP15.64■□□□□ 0.09
COL4A1-201ENST00000375820 KRT28Q7Z3Y7 464 aa15.64■□□□□ 0.09
COL4A1-201ENST00000375820 USP48Q86UV5 1035 aa15.64■□□□□ 0.09
COL4A1-201ENST00000375820 IQCGQ9H095 443 aaKnown RBP15.64■□□□□ 0.09
COL4A1-201ENST00000375820 CALCOCO1Q9P1Z2 691 aa15.64■□□□□ 0.09
COL4A1-201ENST00000375820 CLEC11AQ9Y240 323 aa15.64■□□□□ 0.09
COL4A1-201ENST00000375820 ASIC1P78348 528 aa15.63■□□□□ 0.09
COL4A1-201ENST00000375820 CCDC6Q16204 474 aa15.63■□□□□ 0.09
COL4A1-201ENST00000375820 ZBTB43O43298 467 aa15.63■□□□□ 0.09
COL4A1-201ENST00000375820 PKD2L1Q9P0L9 805 aa15.63■□□□□ 0.09
COL4A1-201ENST00000375820 TCHPQ9BT92 498 aa15.63■□□□□ 0.09
COL4A1-201ENST00000375820 VEZTQ9HBM0 779 aa15.63■□□□□ 0.09
COL4A1-201ENST00000375820 MNAT1P51948 309 aa15.63■□□□□ 0.09
COL4A1-201ENST00000375820 CCDC155Q8N6L0 562 aa15.63■□□□□ 0.09
COL4A1-201ENST00000375820 ATRIPQ8WXE1 791 aa15.63■□□□□ 0.09
COL4A1-201ENST00000375820 NAPAP54920 295 aa15.62■□□□□ 0.09
COL4A1-201ENST00000375820 MIGA1Q8NAN2 632 aa15.62■□□□□ 0.09
COL4A1-201ENST00000375820 PA2G4Q9UQ80 394 aaKnown RBP15.62■□□□□ 0.09
COL4A1-201ENST00000375820 POTEB2H3BUK9 544 aa15.62■□□□□ 0.09
COL4A1-201ENST00000375820 ZSCAN22P10073 491 aaPredicted RBP15.62■□□□□ 0.09
COL4A1-201ENST00000375820 C6orf163Q5TEZ5 329 aa15.62■□□□□ 0.09
COL4A1-201ENST00000375820 ST5P78524 1137 aa15.62■□□□□ 0.09
COL4A1-201ENST00000375820 PLCB3Q01970 1234 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms