RNA–Protein interactions for RNA: ENST00000375023.3

NOTCH4-201, Transcript of notch 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH4, Length 6,745 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH4-201ENST00000375023 IGHDP01880 384 aa16.89■□□□□ 0.29
NOTCH4-201ENST00000375023 SLC4A4Q9Y6R1 1079 aa16.89■□□□□ 0.29
NOTCH4-201ENST00000375023 TRIM47Q96LD4 638 aa16.89■□□□□ 0.29
NOTCH4-201ENST00000375023 FAM170AA1A519 330 aa16.89■□□□□ 0.29
NOTCH4-201ENST00000375023 GTF2F1P35269 517 aaKnown RBP eCLIP16.89■□□□□ 0.29
NOTCH4-201ENST00000375023 HELBQ8NG08 1087 aaPredicted RBP16.89■□□□□ 0.29
NOTCH4-201ENST00000375023 PKNOX2Q96KN3 472 aa16.89■□□□□ 0.29
NOTCH4-201ENST00000375023 STK32BQ9NY57 414 aa16.89■□□□□ 0.29
NOTCH4-201ENST00000375023 KLF18A0A0U1RQI7 1052 aa16.88■□□□□ 0.29
NOTCH4-201ENST00000375023 SH2B1Q9NRF2 756 aaPredicted RBP16.88■□□□□ 0.29
NOTCH4-201ENST00000375023 EHBP1L1Q8N3D4 1523 aa16.88■□□□□ 0.29
NOTCH4-201ENST00000375023 FGFR1OPO95684 399 aaKnown RBP16.88■□□□□ 0.29
NOTCH4-201ENST00000375023 RXRAP19793 462 aa16.88■□□□□ 0.29
NOTCH4-201ENST00000375023 ZSCAN30Q86W11 494 aa16.88■□□□□ 0.29
NOTCH4-201ENST00000375023 HLA-DOAP06340 250 aa16.88■□□□□ 0.29
NOTCH4-201ENST00000375023 HMGB1P09429 215 aaKnown RBP16.88■□□□□ 0.29
NOTCH4-201ENST00000375023 ARHGAP27Q6ZUM4 889 aa16.88■□□□□ 0.29
NOTCH4-201ENST00000375023 SLF2Q8IX21 1173 aa16.88■□□□□ 0.29
NOTCH4-201ENST00000375023 CDC5LQ99459 802 aaKnown RBP16.88■□□□□ 0.29
NOTCH4-201ENST00000375023 GIMAP7Q8NHV1 300 aa16.88■□□□□ 0.29
NOTCH4-201ENST00000375023 PHAXQ9H814 394 aaKnown RBP16.88■□□□□ 0.29
NOTCH4-201ENST00000375023 WASLO00401 505 aaPredicted RBP16.87■□□□□ 0.29
NOTCH4-201ENST00000375023 RRAGBQ5VZM2 374 aa16.87■□□□□ 0.29
NOTCH4-201ENST00000375023 DNAI2Q9GZS0 605 aa16.87■□□□□ 0.29
NOTCH4-201ENST00000375023 EXOC1Q9NV70 894 aa16.87■□□□□ 0.29
NOTCH4-201ENST00000375023 PA2G4Q9UQ80 394 aaKnown RBP16.87■□□□□ 0.29
NOTCH4-201ENST00000375023 CNPY2Q9Y2B0 182 aa16.87■□□□□ 0.29
NOTCH4-201ENST00000375023 IFIT1BQ5T764 474 aaKnown RBP16.87■□□□□ 0.29
NOTCH4-201ENST00000375023 CTR9Q6PD62 1173 aa16.87■□□□□ 0.29
NOTCH4-201ENST00000375023 SETDB2Q96T68 719 aa16.87■□□□□ 0.29
NOTCH4-201ENST00000375023 ECHDC1Q9NTX5 307 aa16.87■□□□□ 0.29
NOTCH4-201ENST00000375023 PABPN1LA6NDY0 278 aaKnown RBP16.87■□□□□ 0.29
NOTCH4-201ENST00000375023 BAG3O95817 575 aa16.87■□□□□ 0.29
NOTCH4-201ENST00000375023 MIGA1Q8NAN2 632 aa16.87■□□□□ 0.29
NOTCH4-201ENST00000375023 MRVI1Q9Y6F6 885 aa16.87■□□□□ 0.29
NOTCH4-201ENST00000375023 NCKAP5LQ9HCH0 1330 aa16.87■□□□□ 0.29
NOTCH4-201ENST00000375023 BRF1Q92994 677 aa16.87■□□□□ 0.29
NOTCH4-201ENST00000375023 PKD2L1Q9P0L9 805 aa16.87■□□□□ 0.29
NOTCH4-201ENST00000375023 GRIPAP1Q4V328 841 aa16.86■□□□□ 0.29
NOTCH4-201ENST00000375023 OTUD6BQ8N6M0 293 aa16.86■□□□□ 0.29
NOTCH4-201ENST00000375023 NKTRP30414 1462 aaKnown RBP16.86■□□□□ 0.29
NOTCH4-201ENST00000375023 GCOM1H8Y6P7 765 aaPredicted RBP16.86■□□□□ 0.29
NOTCH4-201ENST00000375023 MYZAPP0CAP1 466 aa16.86■□□□□ 0.29
NOTCH4-201ENST00000375023 NCOA7Q8NI08 942 aa16.86■□□□□ 0.29
NOTCH4-201ENST00000375023 APBB1IPQ7Z5R6 666 aaPredicted RBP16.86■□□□□ 0.29
NOTCH4-201ENST00000375023 UIMC1Q96RL1 719 aa16.86■□□□□ 0.29
NOTCH4-201ENST00000375023 SUPT6HQ7KZ85 1726 aaKnown RBP16.86■□□□□ 0.29
NOTCH4-201ENST00000375023 STAMBPO95630 424 aa16.86■□□□□ 0.29
NOTCH4-201ENST00000375023 CNGA1P29973 690 aa16.86■□□□□ 0.29
NOTCH4-201ENST00000375023 CCDC12Q8WUD4 166 aaPredicted RBP16.86■□□□□ 0.29
NOTCH4-201ENST00000375023 KIF5BP33176 963 aa16.85■□□□□ 0.29
NOTCH4-201ENST00000375023 APBA3O96018 575 aa16.85■□□□□ 0.29
NOTCH4-201ENST00000375023 WTAPQ15007 396 aa16.85■□□□□ 0.29
NOTCH4-201ENST00000375023 STX1AQ16623 288 aa16.85■□□□□ 0.29
NOTCH4-201ENST00000375023 BCS1LQ9Y276 419 aa16.85■□□□□ 0.29
NOTCH4-201ENST00000375023 PHACTR2O75167 634 aa16.85■□□□□ 0.29
NOTCH4-201ENST00000375023 TBCAO75347 108 aaKnown RBP16.85■□□□□ 0.29
NOTCH4-201ENST00000375023 MAP9Q49MG5 647 aa16.85■□□□□ 0.29
NOTCH4-201ENST00000375023 ALS2CR12Q96Q35 445 aa16.85■□□□□ 0.29
NOTCH4-201ENST00000375023 ALDH1L2Q3SY69 923 aa16.85■□□□□ 0.29
NOTCH4-201ENST00000375023 IFNL2Q8IZJ0 200 aa16.85■□□□□ 0.29
NOTCH4-201ENST00000375023 GINS2Q9Y248 185 aa16.85■□□□□ 0.29
NOTCH4-201ENST00000375023 CCDC24Q8N4L8 307 aa16.85■□□□□ 0.29
NOTCH4-201ENST00000375023 SIRT1Q96EB6 747 aa16.85■□□□□ 0.29
NOTCH4-201ENST00000375023 CCDC174Q6PII3 467 aa16.85■□□□□ 0.29
NOTCH4-201ENST00000375023 IPO4Q8TEX9 1081 aaKnown RBP16.85■□□□□ 0.29
NOTCH4-201ENST00000375023 CETN1Q12798 172 aa16.84■□□□□ 0.29
NOTCH4-201ENST00000375023 XAGE3Q8WTP9 111 aa16.84■□□□□ 0.29
NOTCH4-201ENST00000375023 HECW1Q76N89 1606 aa16.84■□□□□ 0.29
NOTCH4-201ENST00000375023 HCLS1P14317 486 aaPredicted RBP16.84■□□□□ 0.29
NOTCH4-201ENST00000375023 STAT6P42226 847 aa16.84■□□□□ 0.29
NOTCH4-201ENST00000375023 MPHOSPH6Q99547 160 aaKnown RBP16.84■□□□□ 0.29
NOTCH4-201ENST00000375023 SYNJ1O43426 1573 aa16.84■□□□□ 0.29
NOTCH4-201ENST00000375023 EPRSP07814 1512 aaKnown RBP16.84■□□□□ 0.29
NOTCH4-201ENST00000375023 N4BP3O15049 544 aa16.84■□□□□ 0.29
NOTCH4-201ENST00000375023 LRRC59Q96AG4 307 aaKnown RBP16.84■□□□□ 0.29
NOTCH4-201ENST00000375023 MEIS3Q99687 375 aa16.84■□□□□ 0.29
NOTCH4-201ENST00000375023 CRNKL1Q9BZJ0 848 aaKnown RBP16.84■□□□□ 0.29
NOTCH4-201ENST00000375023 PPARDQ03181 441 aa16.84■□□□□ 0.29
NOTCH4-201ENST00000375023 SNW1Q13573 536 aaKnown RBP16.84■□□□□ 0.29
NOTCH4-201ENST00000375023 ZNF710Q8N1W2 664 aa16.84■□□□□ 0.29
NOTCH4-201ENST00000375023 RPGRIP1LQ68CZ1 1315 aa16.84■□□□□ 0.29
NOTCH4-201ENST00000375023 SMIM23A6NLE4 172 aa16.84■□□□□ 0.29
NOTCH4-201ENST00000375023 AMPD3Q01432 767 aa16.84■□□□□ 0.29
NOTCH4-201ENST00000375023 TTF1Q15361 905 aaPredicted RBP16.83■□□□□ 0.29
NOTCH4-201ENST00000375023 PPP4R3BQ5MIZ7 849 aa16.83■□□□□ 0.29
NOTCH4-201ENST00000375023 PPP1R14CQ8TAE6 165 aa16.83■□□□□ 0.29
NOTCH4-201ENST00000375023 ALG1Q9BT22 464 aa16.83■□□□□ 0.29
NOTCH4-201ENST00000375023 GNG11P61952 73 aa16.83■□□□□ 0.28
NOTCH4-201ENST00000375023 ZKSCAN3Q9BRR0 538 aa16.83■□□□□ 0.28
NOTCH4-201ENST00000375023 ZRANB1Q9UGI0 708 aa16.83■□□□□ 0.28
NOTCH4-201ENST00000375023 ACEP12821 1306 aa16.83■□□□□ 0.28
NOTCH4-201ENST00000375023 ANKRD13DQ6ZTN6 518 aa16.83■□□□□ 0.28
NOTCH4-201ENST00000375023 Q6ZUG5 572 aa16.83■□□□□ 0.28
NOTCH4-201ENST00000375023 COPS6Q7L5N1 327 aa16.83■□□□□ 0.28
NOTCH4-201ENST00000375023 GBP3Q9H0R5 595 aa16.83■□□□□ 0.28
NOTCH4-201ENST00000375023 ZNF165P49910 485 aa16.82■□□□□ 0.28
NOTCH4-201ENST00000375023 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.82■□□□□ 0.28
NOTCH4-201ENST00000375023 V9GYY5 206 aaPredicted RBP16.82■□□□□ 0.28
NOTCH4-201ENST00000375023 NIP7Q9Y221 180 aaKnown RBP eCLIP16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms