RNA–Protein interactions for RNA: ENST00000373163.5

TRAPPC3-203, Transcript of trafficking protein particle complex 3, humanhuman

TSL 3 BASIC

Gene TRAPPC3, Length 951 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-203ENST00000373163 RRP7AQ9Y3A4 280 aaKnown RBP20.92■□□□□ 0.94
TRAPPC3-203ENST00000373163 ABCC4O15439 1325 aa20.92■□□□□ 0.94
TRAPPC3-203ENST00000373163 PPP1R42Q7Z4L9 355 aa20.91■□□□□ 0.94
TRAPPC3-203ENST00000373163 C2orf69Q8N8R5 385 aa20.91■□□□□ 0.94
TRAPPC3-203ENST00000373163 GBA2Q9HCG7 927 aaPredicted RBP20.91■□□□□ 0.94
TRAPPC3-203ENST00000373163 MIS18AQ9NYP9 233 aa20.91■□□□□ 0.94
TRAPPC3-203ENST00000373163 HTATSF1O43719 755 aaKnown RBP20.9■□□□□ 0.94
TRAPPC3-203ENST00000373163 MYL6BP14649 208 aa20.9■□□□□ 0.94
TRAPPC3-203ENST00000373163 ZNF157P51786 506 aaPredicted RBP20.9■□□□□ 0.94
TRAPPC3-203ENST00000373163 KRT26Q7Z3Y9 468 aa20.9■□□□□ 0.94
TRAPPC3-203ENST00000373163 CTU1Q7Z7A3 348 aaKnown RBP20.9■□□□□ 0.94
TRAPPC3-203ENST00000373163 MPNDQ8N594 471 aa20.9■□□□□ 0.94
TRAPPC3-203ENST00000373163 YDJCA8MPS7 323 aa20.89■□□□□ 0.93
TRAPPC3-203ENST00000373163 SP8Q8IXZ3 490 aa20.89■□□□□ 0.93
TRAPPC3-203ENST00000373163 CFAP53Q96M91 514 aa20.89■□□□□ 0.93
TRAPPC3-203ENST00000373163 LAMB4A4D0S4 1761 aa20.88■□□□□ 0.93
TRAPPC3-203ENST00000373163 BBOX1O75936 387 aa20.88■□□□□ 0.93
TRAPPC3-203ENST00000373163 PARP10Q53GL7 1025 aa20.88■□□□□ 0.93
TRAPPC3-203ENST00000373163 GIGYF2Q6Y7W6 1299 aaKnown RBP20.88■□□□□ 0.93
TRAPPC3-203ENST00000373163 SAMD7Q7Z3H4 446 aa20.88■□□□□ 0.93
TRAPPC3-203ENST00000373163 NUDCQ9Y266 331 aa20.88■□□□□ 0.93
TRAPPC3-203ENST00000373163 PDE4DIPQ5VU43 2346 aa20.87■□□□□ 0.93
TRAPPC3-203ENST00000373163 U2AF1L5P0DN76 240 aaPredicted RBP20.87■□□□□ 0.93
TRAPPC3-203ENST00000373163 U2AF1Q01081 240 aaKnown RBP eCLIP20.87■□□□□ 0.93
TRAPPC3-203ENST00000373163 SLC10A5Q5PT55 438 aa20.87■□□□□ 0.93
TRAPPC3-203ENST00000373163 ZBTB12Q9Y330 459 aaPredicted RBP20.87■□□□□ 0.93
TRAPPC3-203ENST00000373163 ADM5C9JUS6 153 aa20.86■□□□□ 0.93
TRAPPC3-203ENST00000373163 DPF2Q92785 391 aa20.86■□□□□ 0.93
TRAPPC3-203ENST00000373163 UTP14AQ9BVJ6 771 aaKnown RBP20.86■□□□□ 0.93
TRAPPC3-203ENST00000373163 HPS5Q9UPZ3 1129 aa20.86■□□□□ 0.93
TRAPPC3-203ENST00000373163 NUP98P52948 1817 aa20.85■□□□□ 0.93
TRAPPC3-203ENST00000373163 SLC10A3P09131 477 aa20.85■□□□□ 0.93
TRAPPC3-203ENST00000373163 TBC1D10BQ4KMP7 808 aaPredicted RBP20.85■□□□□ 0.93
TRAPPC3-203ENST00000373163 DCPSQ96C86 337 aaKnown RBP20.85■□□□□ 0.93
TRAPPC3-203ENST00000373163 CSRNP1Q96S65 589 aa20.85■□□□□ 0.93
TRAPPC3-203ENST00000373163 EGFRP00533 1210 aa20.84■□□□□ 0.93
TRAPPC3-203ENST00000373163 TRIM26Q12899 539 aaPredicted RBP20.84■□□□□ 0.93
TRAPPC3-203ENST00000373163 PNISRQ8TF01 805 aaKnown RBP20.84■□□□□ 0.93
TRAPPC3-203ENST00000373163 PSMD14O00487 310 aa20.83■□□□□ 0.93
TRAPPC3-203ENST00000373163 EIF4A1P60842 406 aaKnown RBP20.83■□□□□ 0.93
TRAPPC3-203ENST00000373163 DDX46Q7L014 1031 aaKnown RBP20.82■□□□□ 0.92
TRAPPC3-203ENST00000373163 GRAPQ13588 217 aa20.81■□□□□ 0.92
TRAPPC3-203ENST00000373163 PKN2Q16513 984 aaKnown RBP20.81■□□□□ 0.92
TRAPPC3-203ENST00000373163 RBM26Q5T8P6 1007 aaKnown RBP20.81■□□□□ 0.92
TRAPPC3-203ENST00000373163 REM2Q8IYK8 340 aaPredicted RBP20.81■□□□□ 0.92
TRAPPC3-203ENST00000373163 GRAPLQ8TC17 118 aaPredicted RBP20.81■□□□□ 0.92
TRAPPC3-203ENST00000373163 PCGF6Q9BYE7 350 aa20.81■□□□□ 0.92
TRAPPC3-203ENST00000373163 RPS12P25398 132 aaKnown RBP20.8■□□□□ 0.92
TRAPPC3-203ENST00000373163 SULF1Q8IWU6 871 aa20.8■□□□□ 0.92
TRAPPC3-203ENST00000373163 GCC1Q96CN9 775 aa20.8■□□□□ 0.92
TRAPPC3-203ENST00000373163 ERBB4Q15303 1308 aa20.79■□□□□ 0.92
TRAPPC3-203ENST00000373163 HCLS1P14317 486 aaPredicted RBP20.79■□□□□ 0.92
TRAPPC3-203ENST00000373163 WASHC4Q2M389 1173 aa20.79■□□□□ 0.92
TRAPPC3-203ENST00000373163 RASAL3Q86YV0 1011 aa20.79■□□□□ 0.92
TRAPPC3-203ENST00000373163 DBNDD1Q9H9R9 158 aa20.79■□□□□ 0.92
TRAPPC3-203ENST00000373163 HDAC9Q9UKV0 1011 aa20.79■□□□□ 0.92
TRAPPC3-203ENST00000373163 DUOX1Q9NRD9 1551 aa20.79■□□□□ 0.92
TRAPPC3-203ENST00000373163 KIF4BQ2VIQ3 1234 aa20.78■□□□□ 0.92
TRAPPC3-203ENST00000373163 TMC4Q7Z404 712 aa20.78■□□□□ 0.92
TRAPPC3-203ENST00000373163 GGA3Q9NZ52 723 aa20.78■□□□□ 0.92
TRAPPC3-203ENST00000373163 THUMPD2Q9BTF0 503 aaKnown RBP20.77■□□□□ 0.92
TRAPPC3-203ENST00000373163 LRP10Q7Z4F1 713 aa20.76■□□□□ 0.91
TRAPPC3-203ENST00000373163 CDCA5Q96FF9 252 aa20.76■□□□□ 0.91
TRAPPC3-203ENST00000373163 KDM3BQ7LBC6 1761 aa20.75■□□□□ 0.91
TRAPPC3-203ENST00000373163 RIMBP2O15034 1052 aa20.75■□□□□ 0.91
TRAPPC3-203ENST00000373163 ZNF296Q8WUU4 475 aaPredicted RBP20.75■□□□□ 0.91
TRAPPC3-203ENST00000373163 NSFL1CQ9UNZ2 370 aaKnown RBP20.75■□□□□ 0.91
TRAPPC3-203ENST00000373163 RTL9Q8NET4 1388 aa20.74■□□□□ 0.91
TRAPPC3-203ENST00000373163 ECE2O60344 883 aa20.74■□□□□ 0.91
TRAPPC3-203ENST00000373163 NLRP10Q86W26 655 aa20.74■□□□□ 0.91
TRAPPC3-203ENST00000373163 KCNQ5Q9NR82 932 aa20.74■□□□□ 0.91
TRAPPC3-203ENST00000373163 TRMT112Q9UI30 125 aaKnown RBP20.74■□□□□ 0.91
TRAPPC3-203ENST00000373163 ASTN2O75129 1339 aaPredicted RBP20.74■□□□□ 0.91
TRAPPC3-203ENST00000373163 SH3TC1Q8TE82 1336 aa20.74■□□□□ 0.91
TRAPPC3-203ENST00000373163 C6orf229H3BNL8 230 aa20.73■□□□□ 0.91
TRAPPC3-203ENST00000373163 PDIA6Q15084 440 aa20.73■□□□□ 0.91
TRAPPC3-203ENST00000373163 HSP90AB3PQ58FF7 597 aa20.73■□□□□ 0.91
TRAPPC3-203ENST00000373163 TBC1D8O95759 1140 aa20.72■□□□□ 0.91
TRAPPC3-203ENST00000373163 NEFMP07197 916 aa20.72■□□□□ 0.91
TRAPPC3-203ENST00000373163 FKBP1BP68106 108 aa20.72■□□□□ 0.91
TRAPPC3-203ENST00000373163 DOK7Q18PE1 504 aa20.72■□□□□ 0.91
TRAPPC3-203ENST00000373163 AKAP11Q9UKA4 1901 aa20.71■□□□□ 0.91
TRAPPC3-203ENST00000373163 EIF2S2P20042 333 aaKnown RBP20.71■□□□□ 0.91
TRAPPC3-203ENST00000373163 PROSER3Q2NL68 480 aa20.71■□□□□ 0.91
TRAPPC3-203ENST00000373163 HABP4Q5JVS0 413 aaKnown RBP20.71■□□□□ 0.91
TRAPPC3-203ENST00000373163 FBXO46Q6PJ61 603 aaPredicted RBP20.71■□□□□ 0.91
TRAPPC3-203ENST00000373163 POLLQ9UGP5 575 aa20.71■□□□□ 0.91
TRAPPC3-203ENST00000373163 LRRC37AA6NMS7 1700 aa20.7■□□□□ 0.9
TRAPPC3-203ENST00000373163 ANKRD36CQ5JPF3 1778 aa20.7■□□□□ 0.9
TRAPPC3-203ENST00000373163 ANXA1P04083 346 aa20.7■□□□□ 0.9
TRAPPC3-203ENST00000373163 PPP2R1AP30153 589 aa20.7■□□□□ 0.9
TRAPPC3-203ENST00000373163 ANGEL2Q5VTE6 544 aaKnown RBP20.7■□□□□ 0.9
TRAPPC3-203ENST00000373163 EYA3Q99504 573 aa20.7■□□□□ 0.9
TRAPPC3-203ENST00000373163 LAMB2P55268 1798 aa20.69■□□□□ 0.9
TRAPPC3-203ENST00000373163 VIL1P09327 827 aaKnown RBP20.69■□□□□ 0.9
TRAPPC3-203ENST00000373163 GPSM2P81274 684 aa20.69■□□□□ 0.9
TRAPPC3-203ENST00000373163 CELF1Q92879 486 aaKnown RBP20.69■□□□□ 0.9
TRAPPC3-203ENST00000373163 GPR25O00155 361 aa20.68■□□□□ 0.9
TRAPPC3-203ENST00000373163 TCIRG1Q13488 830 aa20.68■□□□□ 0.9
TRAPPC3-203ENST00000373163 SCARF1Q14162 830 aa20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms