RNA–Protein interactions for RNA: ENST00000373093.4

GRIK3-202, Transcript of glutamate ionotropic receptor kainate type subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GRIK3, Length 2,955 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRIK3-202ENST00000373093 GOLGA6L4A6NEF3 574 aa12.97□□□□□ -0.33
GRIK3-202ENST00000373093 UBE3BQ7Z3V4 1068 aa12.97□□□□□ -0.33
GRIK3-202ENST00000373093 TRMT1Q9NXH9 659 aaKnown RBP12.97□□□□□ -0.33
GRIK3-202ENST00000373093 CCDC192P0DO97 292 aa12.96□□□□□ -0.33
GRIK3-202ENST00000373093 ZKSCAN1P17029 563 aaPredicted RBP12.96□□□□□ -0.33
GRIK3-202ENST00000373093 TYRO3Q06418 890 aa12.96□□□□□ -0.33
GRIK3-202ENST00000373093 MRVI1Q9Y6F6 885 aa12.96□□□□□ -0.33
GRIK3-202ENST00000373093 CEMIPQ8WUJ3 1361 aa12.96□□□□□ -0.33
GRIK3-202ENST00000373093 TFCP2Q12800 502 aa12.96□□□□□ -0.33
GRIK3-202ENST00000373093 SPTLC3Q9NUV7 552 aa12.96□□□□□ -0.33
GRIK3-202ENST00000373093 HSP90B1P14625 803 aaKnown RBP12.96□□□□□ -0.34
GRIK3-202ENST00000373093 HSP90AB3PQ58FF7 597 aa12.96□□□□□ -0.34
GRIK3-202ENST00000373093 NUP62CLQ9H1M0 184 aa12.96□□□□□ -0.34
GRIK3-202ENST00000373093 CBX8Q9HC52 389 aa12.96□□□□□ -0.34
GRIK3-202ENST00000373093 ZSWIM6Q9HCJ5 1215 aa12.96□□□□□ -0.34
GRIK3-202ENST00000373093 RUFY2Q8WXA3 655 aa12.95□□□□□ -0.34
GRIK3-202ENST00000373093 ZNF496Q96IT1 587 aaPredicted RBP12.95□□□□□ -0.34
GRIK3-202ENST00000373093 NEUROD6Q96NK8 337 aa12.95□□□□□ -0.34
GRIK3-202ENST00000373093 TNMDQ9H2S6 317 aa12.95□□□□□ -0.34
GRIK3-202ENST00000373093 USP27XA6NNY8 438 aa12.95□□□□□ -0.34
GRIK3-202ENST00000373093 NR1I2O75469 434 aa12.95□□□□□ -0.34
GRIK3-202ENST00000373093 CSB-PGBD3P0DP91 1061 aa12.95□□□□□ -0.34
GRIK3-202ENST00000373093 TNNT1P13805 278 aa12.95□□□□□ -0.34
GRIK3-202ENST00000373093 CCT2P78371 535 aaKnown RBP12.95□□□□□ -0.34
GRIK3-202ENST00000373093 PDIA6Q15084 440 aa12.95□□□□□ -0.34
GRIK3-202ENST00000373093 CCDC144BQ3MJ40 725 aa12.95□□□□□ -0.34
GRIK3-202ENST00000373093 CCDC144CPQ8IYA2 1237 aa12.95□□□□□ -0.34
GRIK3-202ENST00000373093 BICD2Q8TD16 824 aa12.95□□□□□ -0.34
GRIK3-202ENST00000373093 EVI5LQ96CN4 794 aa12.95□□□□□ -0.34
GRIK3-202ENST00000373093 DBNDD2Q9BQY9 259 aa12.95□□□□□ -0.34
GRIK3-202ENST00000373093 FAM208AQ9UK61 1670 aaKnown RBP12.94□□□□□ -0.34
GRIK3-202ENST00000373093 FMN2Q9NZ56 1722 aa12.94□□□□□ -0.34
GRIK3-202ENST00000373093 NCBP1Q09161 790 aaKnown RBP12.94□□□□□ -0.34
GRIK3-202ENST00000373093 MAP3K11Q16584 847 aa12.94□□□□□ -0.34
GRIK3-202ENST00000373093 BLOC1S2Q6QNY1 142 aa12.94□□□□□ -0.34
GRIK3-202ENST00000373093 ZNF771Q7L3S4 317 aaPredicted RBP12.94□□□□□ -0.34
GRIK3-202ENST00000373093 FILIP1Q7Z7B0 1213 aa12.94□□□□□ -0.34
GRIK3-202ENST00000373093 TOPAZ1Q8N9V7 1692 aa12.94□□□□□ -0.34
GRIK3-202ENST00000373093 FGD1P98174 961 aa12.94□□□□□ -0.34
GRIK3-202ENST00000373093 TOB2Q14106 344 aaPredicted RBP12.94□□□□□ -0.34
GRIK3-202ENST00000373093 HSP90AB4PQ58FF6 505 aa12.94□□□□□ -0.34
GRIK3-202ENST00000373093 VPS53Q5VIR6 699 aa12.94□□□□□ -0.34
GRIK3-202ENST00000373093 DBNLQ9UJU6 430 aaKnown RBP12.94□□□□□ -0.34
GRIK3-202ENST00000373093 NALCNQ8IZF0 1738 aa12.94□□□□□ -0.34
GRIK3-202ENST00000373093 TIMM10P62072 90 aa12.93□□□□□ -0.34
GRIK3-202ENST00000373093 TPD52L1Q16890 204 aaPredicted RBP12.93□□□□□ -0.34
GRIK3-202ENST00000373093 TMEM87AQ8NBN3 555 aa12.93□□□□□ -0.34
GRIK3-202ENST00000373093 CACTINQ8WUQ7 758 aaKnown RBP12.93□□□□□ -0.34
GRIK3-202ENST00000373093 GPATCH3Q96I76 525 aa12.93□□□□□ -0.34
GRIK3-202ENST00000373093 NCOA5Q9HCD5 579 aaKnown RBP12.93□□□□□ -0.34
GRIK3-202ENST00000373093 AOX1Q06278 1338 aa12.93□□□□□ -0.34
GRIK3-202ENST00000373093 COL15A1P39059 1388 aa12.93□□□□□ -0.34
GRIK3-202ENST00000373093 MAP4K1Q92918 833 aa12.93□□□□□ -0.34
GRIK3-202ENST00000373093 ZNF594Q96JF6 807 aaPredicted RBP12.93□□□□□ -0.34
GRIK3-202ENST00000373093 ST7Q9NRC1 585 aa12.93□□□□□ -0.34
GRIK3-202ENST00000373093 CGNQ9P2M7 1197 aaKnown RBP12.93□□□□□ -0.34
GRIK3-202ENST00000373093 TTC41PQ6P2S7 1318 aa12.93□□□□□ -0.34
GRIK3-202ENST00000373093 RGPD2P0DJD1 1756 aa12.93□□□□□ -0.34
GRIK3-202ENST00000373093 LINS1Q8NG48 757 aa12.93□□□□□ -0.34
GRIK3-202ENST00000373093 SPATA32Q96LK8 384 aa12.93□□□□□ -0.34
GRIK3-202ENST00000373093 ATP6V1DQ9Y5K8 247 aa12.93□□□□□ -0.34
GRIK3-202ENST00000373093 GTF2F1P35269 517 aaKnown RBP eCLIP12.92□□□□□ -0.34
GRIK3-202ENST00000373093 ZNF790Q6PG37 636 aa12.92□□□□□ -0.34
GRIK3-202ENST00000373093 FAM200AQ8TCP9 573 aa12.92□□□□□ -0.34
GRIK3-202ENST00000373093 GPHNQ9NQX3 736 aaPredicted RBP12.92□□□□□ -0.34
GRIK3-202ENST00000373093 FER1L4A9Z1Z3 1794 aa12.92□□□□□ -0.34
GRIK3-202ENST00000373093 KRT85P78386 507 aa12.92□□□□□ -0.34
GRIK3-202ENST00000373093 ARHGEF25Q86VW2 580 aa12.92□□□□□ -0.34
GRIK3-202ENST00000373093 BRF1Q92994 677 aa12.92□□□□□ -0.34
GRIK3-202ENST00000373093 SNRKQ9NRH2 765 aa12.92□□□□□ -0.34
GRIK3-202ENST00000373093 NEURL1BA8MQ27 555 aa12.91□□□□□ -0.34
GRIK3-202ENST00000373093 LETM1O95202 739 aaPredicted RBP12.91□□□□□ -0.34
GRIK3-202ENST00000373093 OTUD7BQ6GQQ9 843 aa12.91□□□□□ -0.34
GRIK3-202ENST00000373093 Q6ZUG5 572 aa12.91□□□□□ -0.34
GRIK3-202ENST00000373093 ZNF165P49910 485 aa12.91□□□□□ -0.34
GRIK3-202ENST00000373093 CLIP2Q9UDT6 1046 aa12.91□□□□□ -0.34
GRIK3-202ENST00000373093 SRCAPQ6ZRS2 3230 aa12.91□□□□□ -0.34
GRIK3-202ENST00000373093 A0A087WZG4 1122 aa12.9□□□□□ -0.34
GRIK3-202ENST00000373093 ERICH4A6NGS2 130 aa12.9□□□□□ -0.34
GRIK3-202ENST00000373093 GCKRQ14397 625 aa12.9□□□□□ -0.34
GRIK3-202ENST00000373093 ZSCAN25Q6NSZ9 544 aa12.9□□□□□ -0.34
GRIK3-202ENST00000373093 TRERF1Q96PN7 1200 aa12.9□□□□□ -0.34
GRIK3-202ENST00000373093 GJB4Q9NTQ9 266 aa12.9□□□□□ -0.34
GRIK3-202ENST00000373093 GOLGA6L6A8MZA4 724 aa12.9□□□□□ -0.34
GRIK3-202ENST00000373093 GOLIM4O00461 696 aa12.9□□□□□ -0.34
GRIK3-202ENST00000373093 PTPN21Q16825 1174 aa12.9□□□□□ -0.34
GRIK3-202ENST00000373093 TTLL5Q6EMB2 1281 aa12.9□□□□□ -0.34
GRIK3-202ENST00000373093 KRT28Q7Z3Y7 464 aa12.9□□□□□ -0.34
GRIK3-202ENST00000373093 DDX21Q9NR30 783 aaKnown RBP eCLIP12.9□□□□□ -0.34
GRIK3-202ENST00000373093 TAF5LO75529 589 aa12.9□□□□□ -0.35
GRIK3-202ENST00000373093 RPS6KB1P23443 525 aa12.9□□□□□ -0.35
GRIK3-202ENST00000373093 APOBRQ0VD83 1088 aa12.9□□□□□ -0.35
GRIK3-202ENST00000373093 RAPGEF4Q8WZA2 1011 aa12.9□□□□□ -0.35
GRIK3-202ENST00000373093 PGBD1Q96JS3 809 aa12.9□□□□□ -0.35
GRIK3-202ENST00000373093 CYP21A2P08686 494 aa12.89□□□□□ -0.35
GRIK3-202ENST00000373093 HAND2P61296 217 aa12.89□□□□□ -0.35
GRIK3-202ENST00000373093 NEXNQ0ZGT2 675 aa12.89□□□□□ -0.35
GRIK3-202ENST00000373093 LMBR1LQ6UX01 489 aa12.89□□□□□ -0.35
GRIK3-202ENST00000373093 ANKRD13DQ6ZTN6 518 aa12.89□□□□□ -0.35
GRIK3-202ENST00000373093 ALDH1L1O75891 902 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms